RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 TRMT2AQ8IZ69 625 aaKnown RBP12.37□□□□□ -0.43
ITM2A-201ENST00000373298 VSIG10Q8N0Z9 540 aa12.37□□□□□ -0.43
ITM2A-201ENST00000373298 NGEFQ8N5V2 710 aa12.37□□□□□ -0.43
ITM2A-201ENST00000373298 SGIP1Q9BQI5 828 aa12.37□□□□□ -0.43
ITM2A-201ENST00000373298 ZBTB1Q9Y2K1 713 aa12.37□□□□□ -0.43
ITM2A-201ENST00000373298 LAMB4A4D0S4 1761 aa12.36□□□□□ -0.43
ITM2A-201ENST00000373298 NBPF26B4DH59 902 aa12.36□□□□□ -0.43
ITM2A-201ENST00000373298 TCERG1O14776 1098 aaKnown RBP12.36□□□□□ -0.43
ITM2A-201ENST00000373298 ANXA1P04083 346 aa12.36□□□□□ -0.43
ITM2A-201ENST00000373298 NBPF14Q5TI25 921 aa12.36□□□□□ -0.43
ITM2A-201ENST00000373298 DUSP27Q5VZP5 1158 aa12.36□□□□□ -0.43
ITM2A-201ENST00000373298 NBPF10Q6P3W6 841 aaKnown RBP12.36□□□□□ -0.43
ITM2A-201ENST00000373298 NBPF15Q8N660 670 aa12.36□□□□□ -0.43
ITM2A-201ENST00000373298 EIF2S2P20042 333 aaKnown RBP12.35□□□□□ -0.43
ITM2A-201ENST00000373298 PROSER3Q2NL68 480 aa12.35□□□□□ -0.43
ITM2A-201ENST00000373298 GNPATO15228 680 aa12.34□□□□□ -0.43
ITM2A-201ENST00000373298 CANXP27824 592 aaKnown RBP12.34□□□□□ -0.43
ITM2A-201ENST00000373298 R3HDM1Q15032 1099 aaKnown RBP12.34□□□□□ -0.43
ITM2A-201ENST00000373298 PDIA6Q15084 440 aa12.34□□□□□ -0.43
ITM2A-201ENST00000373298 SLC15A2Q16348 729 aa12.34□□□□□ -0.43
ITM2A-201ENST00000373298 E9PSI1 815 aa12.33□□□□□ -0.43
ITM2A-201ENST00000373298 PHF14O94880 888 aa12.33□□□□□ -0.43
ITM2A-201ENST00000373298 PNPLA7Q6ZV29 1317 aa12.33□□□□□ -0.44
ITM2A-201ENST00000373298 CNTNAP4Q9C0A0 1308 aa12.33□□□□□ -0.44
ITM2A-201ENST00000373298 VAMP4O75379 141 aa12.33□□□□□ -0.44
ITM2A-201ENST00000373298 IER5LQ5T953 404 aa12.33□□□□□ -0.44
ITM2A-201ENST00000373298 MYH16Q9H6N6 1097 aa12.33□□□□□ -0.44
ITM2A-201ENST00000373298 CCDC87Q9NVE4 849 aa12.33□□□□□ -0.44
ITM2A-201ENST00000373298 UTRNP46939 3433 aa12.33□□□□□ -0.44
ITM2A-201ENST00000373298 C4AP0C0L4 1744 aa12.32□□□□□ -0.44
ITM2A-201ENST00000373298 MYL6BP14649 208 aa12.32□□□□□ -0.44
ITM2A-201ENST00000373298 TWISTNBQ3B726 338 aaPredicted RBP12.32□□□□□ -0.44
ITM2A-201ENST00000373298 LRP10Q7Z4F1 713 aa12.32□□□□□ -0.44
ITM2A-201ENST00000373298 COL23A1Q86Y22 540 aaPredicted RBP12.32□□□□□ -0.44
ITM2A-201ENST00000373298 AK7Q96M32 723 aa12.32□□□□□ -0.44
ITM2A-201ENST00000373298 TFCP2L1Q9NZI6 479 aa12.32□□□□□ -0.44
ITM2A-201ENST00000373298 CHPF2Q9P2E5 772 aa12.32□□□□□ -0.44
ITM2A-201ENST00000373298 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.31□□□□□ -0.44
ITM2A-201ENST00000373298 SEC24BO95487 1268 aa12.31□□□□□ -0.44
ITM2A-201ENST00000373298 STARD3NLO95772 234 aa12.31□□□□□ -0.44
ITM2A-201ENST00000373298 RC3H1Q5TC82 1133 aaKnown RBP12.31□□□□□ -0.44
ITM2A-201ENST00000373298 STK32BQ9NY57 414 aa12.31□□□□□ -0.44
ITM2A-201ENST00000373298 ZNF330Q9Y3S2 320 aaPredicted RBP12.31□□□□□ -0.44
ITM2A-201ENST00000373298 SOS1Q07889 1333 aaPredicted RBP12.31□□□□□ -0.44
ITM2A-201ENST00000373298 RPS6KA4O75676 772 aa12.3□□□□□ -0.44
ITM2A-201ENST00000373298 HDGFL1Q5TGJ6 251 aa12.3□□□□□ -0.44
ITM2A-201ENST00000373298 CASZ1Q86V15 1759 aa12.3□□□□□ -0.44
ITM2A-201ENST00000373298 EIF5P55010 431 aaKnown RBP12.29□□□□□ -0.44
ITM2A-201ENST00000373298 ARHGEF1Q92888 912 aaKnown RBP12.29□□□□□ -0.44
ITM2A-201ENST00000373298 TEX13AQ9BXU3 409 aaPredicted RBP12.29□□□□□ -0.44
ITM2A-201ENST00000373298 SRP68Q9UHB9 627 aaKnown RBP12.29□□□□□ -0.44
ITM2A-201ENST00000373298 QSER1Q2KHR3 1735 aa12.29□□□□□ -0.44
ITM2A-201ENST00000373298 TTLL7Q6ZT98 887 aa12.29□□□□□ -0.44
ITM2A-201ENST00000373298 G2E3Q7L622 706 aa12.29□□□□□ -0.44
ITM2A-201ENST00000373298 PHAXQ9H814 394 aaKnown RBP12.29□□□□□ -0.44
ITM2A-201ENST00000373298 TBC1D2BQ9UPU7 963 aa12.29□□□□□ -0.44
ITM2A-201ENST00000373298 RTCBQ9Y3I0 505 aaKnown RBP12.29□□□□□ -0.44
ITM2A-201ENST00000373298 COL15A1P39059 1388 aa12.28□□□□□ -0.44
ITM2A-201ENST00000373298 HOXB7P09629 217 aa12.28□□□□□ -0.44
ITM2A-201ENST00000373298 BCL2L13Q9BXK5 485 aa12.28□□□□□ -0.44
ITM2A-201ENST00000373298 NUBP1P53384 320 aa12.27□□□□□ -0.44
ITM2A-201ENST00000373298 BCL2L12Q9HB09 334 aa12.27□□□□□ -0.44
ITM2A-201ENST00000373298 PCDHB13Q9Y5F0 798 aa12.27□□□□□ -0.44
ITM2A-201ENST00000373298 ZBTB7AO95365 584 aa12.26□□□□□ -0.45
ITM2A-201ENST00000373298 IL6STP40189 918 aaPredicted RBP12.26□□□□□ -0.45
ITM2A-201ENST00000373298 AIMP1Q12904 312 aaKnown RBP12.26□□□□□ -0.45
ITM2A-201ENST00000373298 TRAPPC3LQ5T215 181 aa12.26□□□□□ -0.45
ITM2A-201ENST00000373298 MSL1Q68DK7 614 aa12.26□□□□□ -0.45
ITM2A-201ENST00000373298 DDX21Q9NR30 783 aaKnown RBP eCLIP12.26□□□□□ -0.45
ITM2A-201ENST00000373298 SSFA2P28290 1259 aa12.26□□□□□ -0.45
ITM2A-201ENST00000373298 HLFQ16534 295 aa12.26□□□□□ -0.45
ITM2A-201ENST00000373298 USPL1Q5W0Q7 1092 aa12.26□□□□□ -0.45
ITM2A-201ENST00000373298 XAGE3Q8WTP9 111 aa12.26□□□□□ -0.45
ITM2A-201ENST00000373298 SSH1Q8WYL5 1049 aa12.26□□□□□ -0.45
ITM2A-201ENST00000373298 ZNF428Q96B54 188 aa12.26□□□□□ -0.45
ITM2A-201ENST00000373298 ARXQ96QS3 562 aa12.26□□□□□ -0.45
ITM2A-201ENST00000373298 COPS6Q7L5N1 327 aa12.25□□□□□ -0.45
ITM2A-201ENST00000373298 BCORQ6W2J9 1755 aa12.24□□□□□ -0.45
ITM2A-201ENST00000373298 CAMTA2O94983 1202 aa12.24□□□□□ -0.45
ITM2A-201ENST00000373298 GYS1P13807 737 aa12.24□□□□□ -0.45
ITM2A-201ENST00000373298 FKBP8Q14318 412 aa12.24□□□□□ -0.45
ITM2A-201ENST00000373298 CCDC30Q5VVM6 783 aa12.24□□□□□ -0.45
ITM2A-201ENST00000373298 DZIP3Q86Y13 1208 aaKnown RBP12.24□□□□□ -0.45
ITM2A-201ENST00000373298 ZBTB3Q9H5J0 574 aa12.24□□□□□ -0.45
ITM2A-201ENST00000373298 DBF4Q9UBU7 674 aaPredicted RBP12.24□□□□□ -0.45
ITM2A-201ENST00000373298 USP42Q9H9J4 1324 aaKnown RBP12.24□□□□□ -0.45
ITM2A-201ENST00000373298 SCN7AQ01118 1682 aa12.24□□□□□ -0.45
ITM2A-201ENST00000373298 NUP98P52948 1817 aa12.23□□□□□ -0.45
ITM2A-201ENST00000373298 BCAR3O75815 825 aa12.23□□□□□ -0.45
ITM2A-201ENST00000373298 RFC4P35249 363 aa12.23□□□□□ -0.45
ITM2A-201ENST00000373298 PLCD3Q8N3E9 789 aa12.23□□□□□ -0.45
ITM2A-201ENST00000373298 MRPL50Q8N5N7 158 aaKnown RBP12.23□□□□□ -0.45
ITM2A-201ENST00000373298 NARFQ9UHQ1 456 aa12.23□□□□□ -0.45
ITM2A-201ENST00000373298 ERBB4Q15303 1308 aa12.23□□□□□ -0.45
ITM2A-201ENST00000373298 RARSP54136 660 aaKnown RBP12.22□□□□□ -0.45
ITM2A-201ENST00000373298 CACNA1FO60840 1977 aa12.22□□□□□ -0.45
ITM2A-201ENST00000373298 IFNL1Q8IU54 200 aa12.22□□□□□ -0.45
ITM2A-201ENST00000373298 ARFGEF2Q9Y6D5 1785 aa12.21□□□□□ -0.45
ITM2A-201ENST00000373298 TBC1D9BQ66K14 1250 aa12.21□□□□□ -0.46
ITM2A-201ENST00000373298 CDAN1Q8IWY9 1227 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms