RNA–Protein interactions for RNA: ENST00000368518.5

C1orf43-204, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-204ENST00000368518 C21orf2O43822 256 aa23.3■■□□□ 1.32
C1orf43-204ENST00000368518 LMNB1P20700 586 aa23.3■■□□□ 1.32
C1orf43-204ENST00000368518 CLEC4GQ6UXB4 293 aa23.3■■□□□ 1.32
C1orf43-204ENST00000368518 PDZRN3Q9UPQ7 1066 aa23.3■■□□□ 1.32
C1orf43-204ENST00000368518 KDM3BQ7LBC6 1761 aa23.29■■□□□ 1.32
C1orf43-204ENST00000368518 FAM177BA6PVY3 158 aa23.29■■□□□ 1.32
C1orf43-204ENST00000368518 C16orf71Q8IYS4 520 aaPredicted RBP23.29■■□□□ 1.32
C1orf43-204ENST00000368518 RRAGCQ9HB90 399 aa23.29■■□□□ 1.32
C1orf43-204ENST00000368518 LAMB4A4D0S4 1761 aa23.28■■□□□ 1.32
C1orf43-204ENST00000368518 NFKBIEO00221 500 aa23.28■■□□□ 1.32
C1orf43-204ENST00000368518 EIF4A1P60842 406 aaKnown RBP23.28■■□□□ 1.32
C1orf43-204ENST00000368518 NIP7Q9Y221 180 aaKnown RBP eCLIP23.28■■□□□ 1.32
C1orf43-204ENST00000368518 HLFQ16534 295 aa23.27■■□□□ 1.32
C1orf43-204ENST00000368518 RRP7AQ9Y3A4 280 aaKnown RBP23.27■■□□□ 1.32
C1orf43-204ENST00000368518 CCDC88AQ3V6T2 1871 aa23.26■■□□□ 1.31
C1orf43-204ENST00000368518 RIPK4P57078 832 aa23.26■■□□□ 1.31
C1orf43-204ENST00000368518 CACNA1SQ13698 1873 aa23.26■■□□□ 1.31
C1orf43-204ENST00000368518 SRGNP10124 158 aa23.25■■□□□ 1.31
C1orf43-204ENST00000368518 MYL6BP14649 208 aa23.24■■□□□ 1.31
C1orf43-204ENST00000368518 STYK1Q6J9G0 422 aa23.24■■□□□ 1.31
C1orf43-204ENST00000368518 PRPF40BQ6NWY9 871 aaKnown RBP23.24■■□□□ 1.31
C1orf43-204ENST00000368518 CNKSR1Q969H4 720 aa23.24■■□□□ 1.31
C1orf43-204ENST00000368518 MASTLQ96GX5 879 aa23.24■■□□□ 1.31
C1orf43-204ENST00000368518 TSPYL4Q9UJ04 414 aa23.24■■□□□ 1.31
C1orf43-204ENST00000368518 TPTE2Q6XPS3 522 aa23.23■■□□□ 1.31
C1orf43-204ENST00000368518 RBM46Q8TBY0 533 aaKnown RBP23.23■■□□□ 1.31
C1orf43-204ENST00000368518 SLX4Q8IY92 1834 aa23.23■■□□□ 1.31
C1orf43-204ENST00000368518 TIAM2Q8IVF5 1701 aa23.22■■□□□ 1.31
C1orf43-204ENST00000368518 TTLL7Q6ZT98 887 aa23.22■■□□□ 1.31
C1orf43-204ENST00000368518 CCDC146Q8IYE0 955 aa23.22■■□□□ 1.31
C1orf43-204ENST00000368518 MYBBP1AQ9BQG0 1328 aaKnown RBP23.22■■□□□ 1.31
C1orf43-204ENST00000368518 ZC3H4Q9UPT8 1303 aaKnown RBP23.22■■□□□ 1.31
C1orf43-204ENST00000368518 TNRC6CQ9HCJ0 1690 aaKnown RBP23.22■■□□□ 1.31
C1orf43-204ENST00000368518 GTF2E1P29083 439 aaPredicted RBP23.21■■□□□ 1.31
C1orf43-204ENST00000368518 NEUROD2Q15784 382 aa23.21■■□□□ 1.31
C1orf43-204ENST00000368518 KIF6Q6ZMV9 814 aa23.21■■□□□ 1.31
C1orf43-204ENST00000368518 GLTPD2A6NH11 291 aa23.2■■□□□ 1.3
C1orf43-204ENST00000368518 TMPOP42166 694 aaKnown RBP23.2■■□□□ 1.3
C1orf43-204ENST00000368518 APLP1P51693 650 aa23.2■■□□□ 1.3
C1orf43-204ENST00000368518 FER1L6Q2WGJ9 1857 aa23.19■■□□□ 1.3
C1orf43-204ENST00000368518 RGL2O15211 777 aa23.19■■□□□ 1.3
C1orf43-204ENST00000368518 ERFEQ4G0M1 354 aa23.19■■□□□ 1.3
C1orf43-204ENST00000368518 TAOK3Q9H2K8 898 aa23.19■■□□□ 1.3
C1orf43-204ENST00000368518 ZBTB3Q9H5J0 574 aa23.19■■□□□ 1.3
C1orf43-204ENST00000368518 MAP3K15Q6ZN16 1313 aa23.18■■□□□ 1.3
C1orf43-204ENST00000368518 NPR1P16066 1061 aa23.18■■□□□ 1.3
C1orf43-204ENST00000368518 EIF2S2P20042 333 aaKnown RBP23.18■■□□□ 1.3
C1orf43-204ENST00000368518 ERVV-1B6SEH8 477 aa23.17■■□□□ 1.3
C1orf43-204ENST00000368518 GPTP24298 496 aa23.17■■□□□ 1.3
C1orf43-204ENST00000368518 NUTM1Q86Y26 1132 aa23.17■■□□□ 1.3
C1orf43-204ENST00000368518 NUP98P52948 1817 aa23.17■■□□□ 1.3
C1orf43-204ENST00000368518 ARFGEF2Q9Y6D5 1785 aa23.17■■□□□ 1.3
C1orf43-204ENST00000368518 LMOD3Q0VAK6 560 aa23.16■■□□□ 1.3
C1orf43-204ENST00000368518 WDR43Q15061 677 aaKnown RBP eCLIP23.16■■□□□ 1.3
C1orf43-204ENST00000368518 KLRG2A4D1S0 409 aaPredicted RBP23.15■■□□□ 1.3
C1orf43-204ENST00000368518 VEGFAP15692 232 aaPredicted RBP23.15■■□□□ 1.3
C1orf43-204ENST00000368518 FSTL1Q12841 308 aa23.15■■□□□ 1.3
C1orf43-204ENST00000368518 SOGA3Q5TF21 947 aa23.15■■□□□ 1.3
C1orf43-204ENST00000368518 DPY19L2Q6NUT2 758 aa23.15■■□□□ 1.3
C1orf43-204ENST00000368518 LTBP3Q9NS15 1303 aa23.14■■□□□ 1.3
C1orf43-204ENST00000368518 HTRA3P83110 453 aa23.14■■□□□ 1.29
C1orf43-204ENST00000368518 OLFM4Q6UX06 510 aa23.14■■□□□ 1.29
C1orf43-204ENST00000368518 NECTIN2Q92692 538 aa23.14■■□□□ 1.29
C1orf43-204ENST00000368518 NYXQ9GZU5 481 aa23.14■■□□□ 1.29
C1orf43-204ENST00000368518 ABCC12Q96J65 1359 aa23.14■■□□□ 1.29
C1orf43-204ENST00000368518 DICER1Q9UPY3 1922 aaKnown RBP23.14■■□□□ 1.29
C1orf43-204ENST00000368518 ANXA1P04083 346 aa23.13■■□□□ 1.29
C1orf43-204ENST00000368518 CCDC93Q567U6 631 aa23.13■■□□□ 1.29
C1orf43-204ENST00000368518 C7orf43Q8WVR3 580 aa23.13■■□□□ 1.29
C1orf43-204ENST00000368518 LAS1LQ9Y4W2 734 aaKnown RBP23.13■■□□□ 1.29
C1orf43-204ENST00000368518 UBN2Q6ZU65 1347 aa23.12■■□□□ 1.29
C1orf43-204ENST00000368518 SMC1BQ8NDV3 1235 aa23.12■■□□□ 1.29
C1orf43-204ENST00000368518 RUNDC1Q96C34 613 aa23.12■■□□□ 1.29
C1orf43-204ENST00000368518 ADAMTS8Q9UP79 889 aa23.12■■□□□ 1.29
C1orf43-204ENST00000368518 ERBB4Q15303 1308 aa23.11■■□□□ 1.29
C1orf43-204ENST00000368518 PROSER3Q2NL68 480 aa23.11■■□□□ 1.29
C1orf43-204ENST00000368518 SUSD4Q5VX71 490 aa23.11■■□□□ 1.29
C1orf43-204ENST00000368518 BABAM1Q9NWV8 329 aa23.11■■□□□ 1.29
C1orf43-204ENST00000368518 WDR90Q96KV7 1748 aa23.11■■□□□ 1.29
C1orf43-204ENST00000368518 POTECB2RU33 542 aa23.1■■□□□ 1.29
C1orf43-204ENST00000368518 ALDH1B1P30837 517 aa23.1■■□□□ 1.29
C1orf43-204ENST00000368518 PDIA6Q15084 440 aa23.1■■□□□ 1.29
C1orf43-204ENST00000368518 DNAJC5GQ8N7S2 189 aa23.1■■□□□ 1.29
C1orf43-204ENST00000368518 KRT24Q2M2I5 525 aa23.09■■□□□ 1.29
C1orf43-204ENST00000368518 GIGYF2Q6Y7W6 1299 aaKnown RBP23.09■■□□□ 1.29
C1orf43-204ENST00000368518 ZNF34Q8IZ26 560 aa23.09■■□□□ 1.29
C1orf43-204ENST00000368518 ZNF277Q9NRM2 450 aaPredicted RBP23.09■■□□□ 1.29
C1orf43-204ENST00000368518 TRIM35Q9UPQ4 493 aa23.09■■□□□ 1.29
C1orf43-204ENST00000368518 DDNO94850 711 aaPredicted RBP23.08■■□□□ 1.29
C1orf43-204ENST00000368518 FKBP4Q02790 459 aaKnown RBP eCLIP23.08■■□□□ 1.29
C1orf43-204ENST00000368518 AIMP1Q12904 312 aaKnown RBP23.08■■□□□ 1.29
C1orf43-204ENST00000368518 LRP10Q7Z4F1 713 aa23.08■■□□□ 1.29
C1orf43-204ENST00000368518 RPGRQ92834 1020 aaKnown RBP23.07■■□□□ 1.28
C1orf43-204ENST00000368518 PRKRIP1Q9H875 184 aaPredicted RBP23.07■■□□□ 1.28
C1orf43-204ENST00000368518 CHL1O00533 1208 aa23.06■■□□□ 1.28
C1orf43-204ENST00000368518 NTSR2O95665 410 aa23.06■■□□□ 1.28
C1orf43-204ENST00000368518 CRY2Q49AN0 593 aa23.06■■□□□ 1.28
C1orf43-204ENST00000368518 RTKN2Q8IZC4 609 aa23.06■■□□□ 1.28
C1orf43-204ENST00000368518 COPS6Q7L5N1 327 aa23.05■■□□□ 1.28
C1orf43-204ENST00000368518 PPP1R42Q7Z4L9 355 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms