RNA–Protein interactions for RNA: ENST00000368516.1

C1orf43-203, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 2 BASIC

Gene C1orf43, Length 872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-203ENST00000368516 TOMM70O94826 608 aa21.19■□□□□ 0.98
C1orf43-203ENST00000368516 LMNB1P20700 586 aa21.19■□□□□ 0.98
C1orf43-203ENST00000368516 CCDC24Q8N4L8 307 aa21.19■□□□□ 0.98
C1orf43-203ENST00000368516 CCDC88AQ3V6T2 1871 aa21.18■□□□□ 0.98
C1orf43-203ENST00000368516 NBPF5PQ86XG9 351 aaPredicted RBP21.17■□□□□ 0.98
C1orf43-203ENST00000368516 TIAM2Q8IVF5 1701 aa21.17■□□□□ 0.98
C1orf43-203ENST00000368516 ARFGEF2Q9Y6D5 1785 aa21.17■□□□□ 0.98
C1orf43-203ENST00000368516 CACNA1SQ13698 1873 aa21.16■□□□□ 0.98
C1orf43-203ENST00000368516 EIF4A1P60842 406 aaKnown RBP21.16■□□□□ 0.98
C1orf43-203ENST00000368516 DDX10Q13206 875 aaKnown RBP21.16■□□□□ 0.98
C1orf43-203ENST00000368516 C16orf71Q8IYS4 520 aaPredicted RBP21.16■□□□□ 0.98
C1orf43-203ENST00000368516 THUMPD2Q9BTF0 503 aaKnown RBP21.16■□□□□ 0.98
C1orf43-203ENST00000368516 MYBBP1AQ9BQG0 1328 aaKnown RBP21.15■□□□□ 0.98
C1orf43-203ENST00000368516 STYK1Q6J9G0 422 aa21.15■□□□□ 0.98
C1orf43-203ENST00000368516 CNKSR1Q969H4 720 aa21.15■□□□□ 0.98
C1orf43-203ENST00000368516 NIP7Q9Y221 180 aaKnown RBP eCLIP21.15■□□□□ 0.98
C1orf43-203ENST00000368516 FER1L6Q2WGJ9 1857 aa21.15■□□□□ 0.98
C1orf43-203ENST00000368516 NFKBIEO00221 500 aa21.14■□□□□ 0.97
C1orf43-203ENST00000368516 SRGNP10124 158 aa21.14■□□□□ 0.97
C1orf43-203ENST00000368516 C21orf2O43822 256 aa21.13■□□□□ 0.97
C1orf43-203ENST00000368516 TPTE2Q6XPS3 522 aa21.13■□□□□ 0.97
C1orf43-203ENST00000368516 RBM46Q8TBY0 533 aaKnown RBP21.13■□□□□ 0.97
C1orf43-203ENST00000368516 MASTLQ96GX5 879 aa21.13■□□□□ 0.97
C1orf43-203ENST00000368516 SLX4Q8IY92 1834 aa21.13■□□□□ 0.97
C1orf43-203ENST00000368516 DICER1Q9UPY3 1922 aaKnown RBP21.12■□□□□ 0.97
C1orf43-203ENST00000368516 PRELPP51888 382 aa21.12■□□□□ 0.97
C1orf43-203ENST00000368516 RIPK4P57078 832 aa21.12■□□□□ 0.97
C1orf43-203ENST00000368516 LMOD3Q0VAK6 560 aa21.12■□□□□ 0.97
C1orf43-203ENST00000368516 NUP98P52948 1817 aa21.11■□□□□ 0.97
C1orf43-203ENST00000368516 SOGA3Q5TF21 947 aa21.11■□□□□ 0.97
C1orf43-203ENST00000368516 PRPF40BQ6NWY9 871 aaKnown RBP21.11■□□□□ 0.97
C1orf43-203ENST00000368516 RRAGCQ9HB90 399 aa21.11■□□□□ 0.97
C1orf43-203ENST00000368516 ZNF219Q9P2Y4 722 aaPredicted RBP21.11■□□□□ 0.97
C1orf43-203ENST00000368516 TSPYL4Q9UJ04 414 aa21.11■□□□□ 0.97
C1orf43-203ENST00000368516 LTBP3Q9NS15 1303 aa21.1■□□□□ 0.97
C1orf43-203ENST00000368516 ERVV-1B6SEH8 477 aa21.1■□□□□ 0.97
C1orf43-203ENST00000368516 APLP1P51693 650 aa21.1■□□□□ 0.97
C1orf43-203ENST00000368516 HLFQ16534 295 aa21.1■□□□□ 0.97
C1orf43-203ENST00000368516 KIF6Q6ZMV9 814 aa21.1■□□□□ 0.97
C1orf43-203ENST00000368516 NGEFQ8N5V2 710 aa21.1■□□□□ 0.97
C1orf43-203ENST00000368516 RRP7AQ9Y3A4 280 aaKnown RBP21.1■□□□□ 0.97
C1orf43-203ENST00000368516 ERBB4Q15303 1308 aa21.09■□□□□ 0.97
C1orf43-203ENST00000368516 MAP3K15Q6ZN16 1313 aa21.09■□□□□ 0.97
C1orf43-203ENST00000368516 GLTPD2A6NH11 291 aa21.09■□□□□ 0.97
C1orf43-203ENST00000368516 NPR1P16066 1061 aa21.09■□□□□ 0.97
C1orf43-203ENST00000368516 TMPOP42166 694 aaKnown RBP21.09■□□□□ 0.97
C1orf43-203ENST00000368516 BABAM1Q9NWV8 329 aa21.09■□□□□ 0.97
C1orf43-203ENST00000368516 KLRG2A4D1S0 409 aaPredicted RBP21.08■□□□□ 0.97
C1orf43-203ENST00000368516 MYL6BP14649 208 aa21.08■□□□□ 0.97
C1orf43-203ENST00000368516 FSTL1Q12841 308 aa21.08■□□□□ 0.97
C1orf43-203ENST00000368516 NYXQ9GZU5 481 aa21.08■□□□□ 0.97
C1orf43-203ENST00000368516 TAOK3Q9H2K8 898 aa21.08■□□□□ 0.97
C1orf43-203ENST00000368516 FAM177BA6PVY3 158 aa21.07■□□□□ 0.96
C1orf43-203ENST00000368516 GTF2E1P29083 439 aaPredicted RBP21.07■□□□□ 0.96
C1orf43-203ENST00000368516 WDR43Q15061 677 aaKnown RBP eCLIP21.07■□□□□ 0.96
C1orf43-203ENST00000368516 ERFEQ4G0M1 354 aa21.06■□□□□ 0.96
C1orf43-203ENST00000368516 DPY19L2Q6NUT2 758 aa21.05■□□□□ 0.96
C1orf43-203ENST00000368516 TTLL7Q6ZT98 887 aa21.05■□□□□ 0.96
C1orf43-203ENST00000368516 WDR90Q96KV7 1748 aa21.04■□□□□ 0.96
C1orf43-203ENST00000368516 VEGFAP15692 232 aaPredicted RBP21.04■□□□□ 0.96
C1orf43-203ENST00000368516 CCDC93Q567U6 631 aa21.04■□□□□ 0.96
C1orf43-203ENST00000368516 CCDC146Q8IYE0 955 aa21.04■□□□□ 0.96
C1orf43-203ENST00000368516 RUNDC1Q96C34 613 aa21.04■□□□□ 0.96
C1orf43-203ENST00000368516 IBTKQ9P2D0 1353 aaPredicted RBP21.04■□□□□ 0.96
C1orf43-203ENST00000368516 C7orf43Q8WVR3 580 aa21.03■□□□□ 0.96
C1orf43-203ENST00000368516 ZBTB3Q9H5J0 574 aa21.03■□□□□ 0.96
C1orf43-203ENST00000368516 ALDH1B1P30837 517 aa21.02■□□□□ 0.96
C1orf43-203ENST00000368516 NEUROD2Q15784 382 aa21.02■□□□□ 0.96
C1orf43-203ENST00000368516 SMC1BQ8NDV3 1235 aa21.02■□□□□ 0.96
C1orf43-203ENST00000368516 RIC1Q4ADV7 1423 aa21.02■□□□□ 0.96
C1orf43-203ENST00000368516 ABCC12Q96J65 1359 aa21.01■□□□□ 0.95
C1orf43-203ENST00000368516 EIF2S2P20042 333 aaKnown RBP21.01■□□□□ 0.95
C1orf43-203ENST00000368516 GIGYF2Q6Y7W6 1299 aaKnown RBP21.01■□□□□ 0.95
C1orf43-203ENST00000368516 GPTP24298 496 aa21■□□□□ 0.95
C1orf43-203ENST00000368516 NUTM1Q86Y26 1132 aa21■□□□□ 0.95
C1orf43-203ENST00000368516 UBN2Q6ZU65 1347 aa21■□□□□ 0.95
C1orf43-203ENST00000368516 FKBP4Q02790 459 aaKnown RBP eCLIP20.99■□□□□ 0.95
C1orf43-203ENST00000368516 PDIA6Q15084 440 aa20.99■□□□□ 0.95
C1orf43-203ENST00000368516 CRY2Q49AN0 593 aa20.99■□□□□ 0.95
C1orf43-203ENST00000368516 LRP10Q7Z4F1 713 aa20.99■□□□□ 0.95
C1orf43-203ENST00000368516 ZNF34Q8IZ26 560 aa20.99■□□□□ 0.95
C1orf43-203ENST00000368516 RTKN2Q8IZC4 609 aa20.99■□□□□ 0.95
C1orf43-203ENST00000368516 PRKRIP1Q9H875 184 aaPredicted RBP20.99■□□□□ 0.95
C1orf43-203ENST00000368516 PARP10Q53GL7 1025 aa20.98■□□□□ 0.95
C1orf43-203ENST00000368516 PPP1R42Q7Z4L9 355 aa20.98■□□□□ 0.95
C1orf43-203ENST00000368516 ADAMTS8Q9UP79 889 aa20.98■□□□□ 0.95
C1orf43-203ENST00000368516 CHL1O00533 1208 aa20.97■□□□□ 0.95
C1orf43-203ENST00000368516 SUSD4Q5VX71 490 aa20.97■□□□□ 0.95
C1orf43-203ENST00000368516 TRIM35Q9UPQ4 493 aa20.97■□□□□ 0.95
C1orf43-203ENST00000368516 ANKRD36CQ5JPF3 1778 aa20.97■□□□□ 0.95
C1orf43-203ENST00000368516 NTSR2O95665 410 aa20.96■□□□□ 0.95
C1orf43-203ENST00000368516 PROSER3Q2NL68 480 aa20.96■□□□□ 0.95
C1orf43-203ENST00000368516 DNAJC5GQ8N7S2 189 aa20.96■□□□□ 0.95
C1orf43-203ENST00000368516 RPGRQ92834 1020 aaKnown RBP20.96■□□□□ 0.95
C1orf43-203ENST00000368516 LAS1LQ9Y4W2 734 aaKnown RBP20.96■□□□□ 0.95
C1orf43-203ENST00000368516 POTECB2RU33 542 aa20.95■□□□□ 0.94
C1orf43-203ENST00000368516 ANXA1P04083 346 aa20.94■□□□□ 0.94
C1orf43-203ENST00000368516 HOXA10P31260 410 aaPredicted RBP20.94■□□□□ 0.94
C1orf43-203ENST00000368516 OLFM4Q6UX06 510 aa20.94■□□□□ 0.94
C1orf43-203ENST00000368516 NECTIN2Q92692 538 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms