RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 SRP68Q9UHB9 627 aaKnown RBP12.79□□□□□ -0.36
NUP43-202ENST00000367402 COL15A1P39059 1388 aa12.79□□□□□ -0.36
NUP43-202ENST00000367402 CICQ96RK0 1608 aaPredicted RBP12.78□□□□□ -0.36
NUP43-202ENST00000367402 NBPF26B4DH59 902 aa12.78□□□□□ -0.36
NUP43-202ENST00000367402 HOXB7P09629 217 aa12.78□□□□□ -0.36
NUP43-202ENST00000367402 MYL6BP14649 208 aa12.78□□□□□ -0.36
NUP43-202ENST00000367402 GOLGA2Q08379 1002 aa12.78□□□□□ -0.36
NUP43-202ENST00000367402 USPL1Q5W0Q7 1092 aa12.78□□□□□ -0.36
NUP43-202ENST00000367402 NBPF10Q6P3W6 841 aaKnown RBP12.78□□□□□ -0.36
NUP43-202ENST00000367402 NBPF15Q8N660 670 aa12.78□□□□□ -0.36
NUP43-202ENST00000367402 C8orf58Q8NAV2 365 aa12.78□□□□□ -0.36
NUP43-202ENST00000367402 MYH16Q9H6N6 1097 aa12.78□□□□□ -0.36
NUP43-202ENST00000367402 NARFQ9UHQ1 456 aa12.78□□□□□ -0.36
NUP43-202ENST00000367402 TBC1D2BQ9UPU7 963 aa12.78□□□□□ -0.36
NUP43-202ENST00000367402 COL5A3P25940 1745 aaPredicted RBP12.78□□□□□ -0.36
NUP43-202ENST00000367402 KDM3BQ7LBC6 1761 aa12.78□□□□□ -0.36
NUP43-202ENST00000367402 POTEB2H3BUK9 544 aa12.77□□□□□ -0.37
NUP43-202ENST00000367402 GYS1P13807 737 aa12.77□□□□□ -0.37
NUP43-202ENST00000367402 PTGER2P43116 358 aa12.77□□□□□ -0.37
NUP43-202ENST00000367402 HDGFL1Q5TGJ6 251 aa12.77□□□□□ -0.37
NUP43-202ENST00000367402 ASTLQ6HA08 431 aaPredicted RBP12.77□□□□□ -0.37
NUP43-202ENST00000367402 PELP1Q8IZL8 1130 aaKnown RBP12.77□□□□□ -0.37
NUP43-202ENST00000367402 NLGN1Q8N2Q7 840 aa12.77□□□□□ -0.37
NUP43-202ENST00000367402 SLC39A7Q92504 469 aa12.77□□□□□ -0.37
NUP43-202ENST00000367402 ZNF521Q96K83 1311 aa12.77□□□□□ -0.37
NUP43-202ENST00000367402 USP42Q9H9J4 1324 aaKnown RBP12.77□□□□□ -0.37
NUP43-202ENST00000367402 FANCIQ9NVI1 1328 aa12.77□□□□□ -0.37
NUP43-202ENST00000367402 CASZ1Q86V15 1759 aa12.76□□□□□ -0.37
NUP43-202ENST00000367402 HNRNPUQ00839 825 aaKnown RBP eCLIP12.76□□□□□ -0.37
NUP43-202ENST00000367402 DZIP3Q86Y13 1208 aaKnown RBP12.76□□□□□ -0.37
NUP43-202ENST00000367402 TSPYL6Q8N831 410 aa12.76□□□□□ -0.37
NUP43-202ENST00000367402 TSPYL2Q9H2G4 693 aaPredicted RBP12.76□□□□□ -0.37
NUP43-202ENST00000367402 METRNQ9UJH8 293 aa12.76□□□□□ -0.37
NUP43-202ENST00000367402 ERBB4Q15303 1308 aa12.76□□□□□ -0.37
NUP43-202ENST00000367402 ANXA1P04083 346 aa12.75□□□□□ -0.37
NUP43-202ENST00000367402 C7P10643 843 aa12.75□□□□□ -0.37
NUP43-202ENST00000367402 FKBP8Q14318 412 aa12.75□□□□□ -0.37
NUP43-202ENST00000367402 UBR3Q6ZT12 1888 aa12.75□□□□□ -0.37
NUP43-202ENST00000367402 SGIP1Q9BQI5 828 aa12.75□□□□□ -0.37
NUP43-202ENST00000367402 MYH14Q7Z406 1995 aaKnown RBP12.74□□□□□ -0.37
NUP43-202ENST00000367402 TUBGCP6Q96RT7 1819 aa12.74□□□□□ -0.37
NUP43-202ENST00000367402 QSER1Q2KHR3 1735 aa12.74□□□□□ -0.37
NUP43-202ENST00000367402 E9PSI1 815 aa12.74□□□□□ -0.37
NUP43-202ENST00000367402 MMP10P09238 476 aa12.74□□□□□ -0.37
NUP43-202ENST00000367402 EXOSC9Q06265 439 aaKnown RBP12.74□□□□□ -0.37
NUP43-202ENST00000367402 PDIA6Q15084 440 aa12.74□□□□□ -0.37
NUP43-202ENST00000367402 PROSER3Q2NL68 480 aa12.74□□□□□ -0.37
NUP43-202ENST00000367402 TWISTNBQ3B726 338 aaPredicted RBP12.74□□□□□ -0.37
NUP43-202ENST00000367402 CHMP4AQ9BY43 222 aa12.74□□□□□ -0.37
NUP43-202ENST00000367402 DDX21Q9NR30 783 aaKnown RBP eCLIP12.74□□□□□ -0.37
NUP43-202ENST00000367402 CHPF2Q9P2E5 772 aa12.74□□□□□ -0.37
NUP43-202ENST00000367402 DBF4Q9UBU7 674 aaPredicted RBP12.74□□□□□ -0.37
NUP43-202ENST00000367402 ATMINO43313 823 aaPredicted RBP12.73□□□□□ -0.37
NUP43-202ENST00000367402 AIMP1Q12904 312 aaKnown RBP12.73□□□□□ -0.37
NUP43-202ENST00000367402 KIF6Q6ZMV9 814 aa12.73□□□□□ -0.37
NUP43-202ENST00000367402 KLHL34Q8N239 644 aa12.73□□□□□ -0.37
NUP43-202ENST00000367402 CDCA7LQ96GN5 454 aa12.73□□□□□ -0.37
NUP43-202ENST00000367402 BCL2L12Q9HB09 334 aa12.73□□□□□ -0.37
NUP43-202ENST00000367402 SRCAPQ6ZRS2 3230 aa12.72□□□□□ -0.37
NUP43-202ENST00000367402 CAMTA2O94983 1202 aa12.72□□□□□ -0.37
NUP43-202ENST00000367402 SLFN5Q08AF3 891 aa12.72□□□□□ -0.37
NUP43-202ENST00000367402 CCDC30Q5VVM6 783 aa12.72□□□□□ -0.37
NUP43-202ENST00000367402 BICDL1Q6ZP65 573 aa12.72□□□□□ -0.37
NUP43-202ENST00000367402 TTLL7Q6ZT98 887 aa12.72□□□□□ -0.37
NUP43-202ENST00000367402 PARP3Q9Y6F1 533 aa12.72□□□□□ -0.37
NUP43-202ENST00000367402 TCERG1O14776 1098 aaKnown RBP12.71□□□□□ -0.37
NUP43-202ENST00000367402 COPS6Q7L5N1 327 aa12.71□□□□□ -0.37
NUP43-202ENST00000367402 XAGE3Q8WTP9 111 aa12.71□□□□□ -0.37
NUP43-202ENST00000367402 STK31Q9BXU1 1019 aa12.71□□□□□ -0.37
NUP43-202ENST00000367402 HYPKQ9NX55 129 aa12.71□□□□□ -0.37
NUP43-202ENST00000367402 ZNF652Q9Y2D9 606 aa12.71□□□□□ -0.37
NUP43-202ENST00000367402 VAMP4O75379 141 aa12.7□□□□□ -0.38
NUP43-202ENST00000367402 TM4SF1P30408 202 aa12.7□□□□□ -0.38
NUP43-202ENST00000367402 NFIXQ14938 502 aa12.7□□□□□ -0.38
NUP43-202ENST00000367402 HLFQ16534 295 aa12.7□□□□□ -0.38
NUP43-202ENST00000367402 TBC1D9BQ66K14 1250 aa12.7□□□□□ -0.38
NUP43-202ENST00000367402 CLEC4GQ6UXB4 293 aa12.7□□□□□ -0.38
NUP43-202ENST00000367402 MAMSTRQ6ZN01 415 aa12.7□□□□□ -0.38
NUP43-202ENST00000367402 LRP10Q7Z4F1 713 aa12.7□□□□□ -0.38
NUP43-202ENST00000367402 FHDC1Q9C0D6 1143 aaPredicted RBP12.7□□□□□ -0.38
NUP43-202ENST00000367402 ZBTB3Q9H5J0 574 aa12.7□□□□□ -0.38
NUP43-202ENST00000367402 LAMB4A4D0S4 1761 aa12.69□□□□□ -0.38
NUP43-202ENST00000367402 MAP3K15Q6ZN16 1313 aa12.69□□□□□ -0.38
NUP43-202ENST00000367402 ERVV-1B6SEH8 477 aa12.69□□□□□ -0.38
NUP43-202ENST00000367402 DDR1Q08345 913 aa12.69□□□□□ -0.38
NUP43-202ENST00000367402 SETDB2Q96T68 719 aa12.69□□□□□ -0.38
NUP43-202ENST00000367402 PHAXQ9H814 394 aaKnown RBP12.69□□□□□ -0.38
NUP43-202ENST00000367402 LRP5O75197 1615 aa12.69□□□□□ -0.38
NUP43-202ENST00000367402 POLRMTO00411 1230 aaKnown RBP12.68□□□□□ -0.38
NUP43-202ENST00000367402 SYT17Q9BSW7 474 aa12.68□□□□□ -0.38
NUP43-202ENST00000367402 NIP7Q9Y221 180 aaKnown RBP eCLIP12.68□□□□□ -0.38
NUP43-202ENST00000367402 C4AP0C0L4 1744 aa12.68□□□□□ -0.38
NUP43-202ENST00000367402 RGL2O15211 777 aa12.67□□□□□ -0.38
NUP43-202ENST00000367402 NPHP1O15259 732 aa12.67□□□□□ -0.38
NUP43-202ENST00000367402 SERPINB2P05120 415 aa12.67□□□□□ -0.38
NUP43-202ENST00000367402 ANKRD13DQ6ZTN6 518 aa12.67□□□□□ -0.38
NUP43-202ENST00000367402 TRMT2AQ8IZ69 625 aaKnown RBP12.67□□□□□ -0.38
NUP43-202ENST00000367402 FAM177BA6PVY3 158 aa12.66□□□□□ -0.38
NUP43-202ENST00000367402 GIGYF2Q6Y7W6 1299 aaKnown RBP12.66□□□□□ -0.38
NUP43-202ENST00000367402 RIC3Q7Z5B4 369 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms