RNA–Protein interactions for RNA: ENST00000366790.3

PARP1-201, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2 BASIC

Gene PARP1, Length 570 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-201ENST00000366790 EIF4A1P60842 406 aaKnown RBP13.75□□□□□ -0.21
PARP1-201ENST00000366790 ST5P78524 1137 aa13.75□□□□□ -0.21
PARP1-201ENST00000366790 STYK1Q6J9G0 422 aa13.75□□□□□ -0.21
PARP1-201ENST00000366790 RBM46Q8TBY0 533 aaKnown RBP13.75□□□□□ -0.21
PARP1-201ENST00000366790 MIS18AQ9NYP9 233 aa13.75□□□□□ -0.21
PARP1-201ENST00000366790 NFKBIEO00221 500 aa13.74□□□□□ -0.21
PARP1-201ENST00000366790 SRGNP10124 158 aa13.74□□□□□ -0.21
PARP1-201ENST00000366790 PRELPP51888 382 aa13.74□□□□□ -0.21
PARP1-201ENST00000366790 RASSF7Q02833 373 aa13.74□□□□□ -0.21
PARP1-201ENST00000366790 CNKSR1Q969H4 720 aa13.74□□□□□ -0.21
PARP1-201ENST00000366790 ZNF622Q969S3 477 aaKnown RBP eCLIP13.74□□□□□ -0.211e-15■□□□□ 9.5
PARP1-201ENST00000366790 NUP98P52948 1817 aa13.74□□□□□ -0.21
PARP1-201ENST00000366790 SLX4Q8IY92 1834 aa13.74□□□□□ -0.21
PARP1-201ENST00000366790 LTBP3Q9NS15 1303 aa13.73□□□□□ -0.21
PARP1-201ENST00000366790 KLRG2A4D1S0 409 aaPredicted RBP13.73□□□□□ -0.21
PARP1-201ENST00000366790 NBPF5PQ86XG9 351 aaPredicted RBP13.73□□□□□ -0.21
PARP1-201ENST00000366790 MASTLQ96GX5 879 aa13.73□□□□□ -0.21
PARP1-201ENST00000366790 BABAM1Q9NWV8 329 aa13.73□□□□□ -0.21
PARP1-201ENST00000366790 TIAM2Q8IVF5 1701 aa13.73□□□□□ -0.21
PARP1-201ENST00000366790 CACNA1SQ13698 1873 aa13.72□□□□□ -0.21
PARP1-201ENST00000366790 ERBB4Q15303 1308 aa13.72□□□□□ -0.21
PARP1-201ENST00000366790 MYBBP1AQ9BQG0 1328 aaKnown RBP13.72□□□□□ -0.21
PARP1-201ENST00000366790 ERVV-1B6SEH8 477 aa13.72□□□□□ -0.21
PARP1-201ENST00000366790 NPHP1O15259 732 aa13.72□□□□□ -0.21
PARP1-201ENST00000366790 SOGA3Q5TF21 947 aa13.72□□□□□ -0.21
PARP1-201ENST00000366790 TPTE2Q6XPS3 522 aa13.72□□□□□ -0.21
PARP1-201ENST00000366790 CCDC24Q8N4L8 307 aa13.72□□□□□ -0.21
PARP1-201ENST00000366790 THUMPD2Q9BTF0 503 aaKnown RBP13.72□□□□□ -0.21
PARP1-201ENST00000366790 GLTPD2A6NH11 291 aa13.71□□□□□ -0.21
PARP1-201ENST00000366790 C21orf2O43822 256 aa13.71□□□□□ -0.21
PARP1-201ENST00000366790 APLP1P51693 650 aa13.71□□□□□ -0.21
PARP1-201ENST00000366790 FSTL1Q12841 308 aa13.71□□□□□ -0.21
PARP1-201ENST00000366790 C16orf71Q8IYS4 520 aaPredicted RBP13.71□□□□□ -0.21
PARP1-201ENST00000366790 NIP7Q9Y221 180 aaKnown RBP eCLIP13.71□□□□□ -0.21
PARP1-201ENST00000366790 MAP3K15Q6ZN16 1313 aa13.7□□□□□ -0.22
PARP1-201ENST00000366790 NPR1P16066 1061 aa13.7□□□□□ -0.22
PARP1-201ENST00000366790 TMPOP42166 694 aaKnown RBP13.7□□□□□ -0.22
PARP1-201ENST00000366790 RIPK4P57078 832 aa13.7□□□□□ -0.22
PARP1-201ENST00000366790 LMOD3Q0VAK6 560 aa13.7□□□□□ -0.22
PARP1-201ENST00000366790 DDX10Q13206 875 aaKnown RBP13.7□□□□□ -0.22
PARP1-201ENST00000366790 HLFQ16534 295 aa13.7□□□□□ -0.22
PARP1-201ENST00000366790 PRPF40BQ6NWY9 871 aaKnown RBP13.7□□□□□ -0.22
PARP1-201ENST00000366790 RRAGCQ9HB90 399 aa13.7□□□□□ -0.22
PARP1-201ENST00000366790 IBTKQ9P2D0 1353 aaPredicted RBP13.7□□□□□ -0.22
PARP1-201ENST00000366790 C7orf43Q8WVR3 580 aa13.69□□□□□ -0.22
PARP1-201ENST00000366790 TAOK3Q9H2K8 898 aa13.69□□□□□ -0.22
PARP1-201ENST00000366790 WDR90Q96KV7 1748 aa13.69□□□□□ -0.22
PARP1-201ENST00000366790 RIC1Q4ADV7 1423 aa13.68□□□□□ -0.22
PARP1-201ENST00000366790 NYXQ9GZU5 481 aa13.68□□□□□ -0.22
PARP1-201ENST00000366790 TSPYL4Q9UJ04 414 aa13.68□□□□□ -0.22
PARP1-201ENST00000366790 VEGFAP15692 232 aaPredicted RBP13.67□□□□□ -0.22
PARP1-201ENST00000366790 DPY19L2Q6NUT2 758 aa13.67□□□□□ -0.22
PARP1-201ENST00000366790 KIF6Q6ZMV9 814 aa13.67□□□□□ -0.22
PARP1-201ENST00000366790 TTLL7Q6ZT98 887 aa13.67□□□□□ -0.22
PARP1-201ENST00000366790 LRP10Q7Z4F1 713 aa13.67□□□□□ -0.22
PARP1-201ENST00000366790 RRP7AQ9Y3A4 280 aaKnown RBP13.67□□□□□ -0.22
PARP1-201ENST00000366790 ALDH1B1P30837 517 aa13.66□□□□□ -0.22
PARP1-201ENST00000366790 CRY2Q49AN0 593 aa13.66□□□□□ -0.22
PARP1-201ENST00000366790 ERFEQ4G0M1 354 aa13.66□□□□□ -0.22
PARP1-201ENST00000366790 CCDC93Q567U6 631 aa13.66□□□□□ -0.22
PARP1-201ENST00000366790 DNAJC5GQ8N7S2 189 aa13.66□□□□□ -0.22
PARP1-201ENST00000366790 SMC1BQ8NDV3 1235 aa13.66□□□□□ -0.22
PARP1-201ENST00000366790 MYL6BP14649 208 aa13.65□□□□□ -0.22
PARP1-201ENST00000366790 PDIA6Q15084 440 aa13.65□□□□□ -0.22
PARP1-201ENST00000366790 GIGYF2Q6Y7W6 1299 aaKnown RBP13.65□□□□□ -0.22
PARP1-201ENST00000366790 ZNF34Q8IZ26 560 aa13.65□□□□□ -0.22
PARP1-201ENST00000366790 NGEFQ8N5V2 710 aa13.65□□□□□ -0.22
PARP1-201ENST00000366790 RUNDC1Q96C34 613 aa13.65□□□□□ -0.22
PARP1-201ENST00000366790 ZNF219Q9P2Y4 722 aaPredicted RBP13.65□□□□□ -0.22
PARP1-201ENST00000366790 ABCC12Q96J65 1359 aa13.64□□□□□ -0.23
PARP1-201ENST00000366790 POTECB2RU33 542 aa13.64□□□□□ -0.23
PARP1-201ENST00000366790 CHL1O00533 1208 aa13.64□□□□□ -0.23
PARP1-201ENST00000366790 GTF2E1P29083 439 aaPredicted RBP13.64□□□□□ -0.23
PARP1-201ENST00000366790 UBN2Q6ZU65 1347 aa13.64□□□□□ -0.23
PARP1-201ENST00000366790 FAM177BA6PVY3 158 aa13.63□□□□□ -0.23
PARP1-201ENST00000366790 HOXA10P31260 410 aaPredicted RBP13.63□□□□□ -0.23
PARP1-201ENST00000366790 FKBP4Q02790 459 aaKnown RBP eCLIP13.63□□□□□ -0.23
PARP1-201ENST00000366790 WDR43Q15061 677 aaKnown RBP eCLIP13.63□□□□□ -0.23
PARP1-201ENST00000366790 PARP10Q53GL7 1025 aa13.63□□□□□ -0.23
PARP1-201ENST00000366790 RTKN2Q8IZC4 609 aa13.63□□□□□ -0.23
PARP1-201ENST00000366790 ZBTB3Q9H5J0 574 aa13.63□□□□□ -0.23
PARP1-201ENST00000366790 PRKRIP1Q9H875 184 aaPredicted RBP13.63□□□□□ -0.23
PARP1-201ENST00000366790 TRIM35Q9UPQ4 493 aa13.63□□□□□ -0.23
PARP1-201ENST00000366790 SNED1Q8TER0 1413 aa13.63□□□□□ -0.23
PARP1-201ENST00000366790 NTSR2O95665 410 aa13.62□□□□□ -0.23
PARP1-201ENST00000366790 SUSD4Q5VX71 490 aa13.62□□□□□ -0.23
PARP1-201ENST00000366790 CC2D2BQ6DHV5 1058 aa13.62□□□□□ -0.23
PARP1-201ENST00000366790 NUTM1Q86Y26 1132 aa13.62□□□□□ -0.23
PARP1-201ENST00000366790 ADAMTS8Q9UP79 889 aa13.62□□□□□ -0.23
PARP1-201ENST00000366790 ANKRD36CQ5JPF3 1778 aa13.62□□□□□ -0.23
PARP1-201ENST00000366790 SCN4AP35499 1836 aa13.62□□□□□ -0.23
PARP1-201ENST00000366790 RNF123Q5XPI4 1314 aa13.62□□□□□ -0.23
PARP1-201ENST00000366790 HOXB7P09629 217 aa13.61□□□□□ -0.23
PARP1-201ENST00000366790 EIF2S2P20042 333 aaKnown RBP13.61□□□□□ -0.23
PARP1-201ENST00000366790 GPTP24298 496 aa13.61□□□□□ -0.23
PARP1-201ENST00000366790 GRIPAP1Q4V328 841 aa13.61□□□□□ -0.23
PARP1-201ENST00000366790 PPP1R42Q7Z4L9 355 aa13.61□□□□□ -0.23
PARP1-201ENST00000366790 CCDC146Q8IYE0 955 aa13.61□□□□□ -0.23
PARP1-201ENST00000366790 PROSER3Q2NL68 480 aa13.6□□□□□ -0.23
PARP1-201ENST00000366790 HSP90AB3PQ58FF7 597 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms