RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 DALRD3Q5D0E6 543 aaKnown RBP13.56□□□□□ -0.24
YBX3-203ENST00000366286 CLEC4GQ6UXB4 293 aa13.56□□□□□ -0.24
YBX3-203ENST00000366286 NGEFQ8N5V2 710 aa13.56□□□□□ -0.24
YBX3-203ENST00000366286 CNBD1Q8NA66 436 aa13.56□□□□□ -0.24
YBX3-203ENST00000366286 SETDB2Q96T68 719 aa13.56□□□□□ -0.24
YBX3-203ENST00000366286 LAS1LQ9Y4W2 734 aaKnown RBP13.56□□□□□ -0.24
YBX3-203ENST00000366286 ERBB4Q15303 1308 aa13.56□□□□□ -0.24
YBX3-203ENST00000366286 SLX4Q8IY92 1834 aa13.55□□□□□ -0.24
YBX3-203ENST00000366286 FER1L6Q2WGJ9 1857 aa13.55□□□□□ -0.24
YBX3-203ENST00000366286 CHL1O00533 1208 aa13.55□□□□□ -0.24
YBX3-203ENST00000366286 KRT24Q2M2I5 525 aa13.55□□□□□ -0.24
YBX3-203ENST00000366286 C2CD5Q86YS7 1000 aa13.55□□□□□ -0.24
YBX3-203ENST00000366286 CCDC24Q8N4L8 307 aa13.55□□□□□ -0.24
YBX3-203ENST00000366286 LAMB2P55268 1798 aa13.54□□□□□ -0.24
YBX3-203ENST00000366286 RGL2O15211 777 aa13.54□□□□□ -0.24
YBX3-203ENST00000366286 NPHP1O15259 732 aa13.54□□□□□ -0.24
YBX3-203ENST00000366286 EIF2S2P20042 333 aaKnown RBP13.54□□□□□ -0.24
YBX3-203ENST00000366286 ST5P78524 1137 aa13.54□□□□□ -0.24
YBX3-203ENST00000366286 HLFQ16534 295 aa13.54□□□□□ -0.24
YBX3-203ENST00000366286 TTLL7Q6ZT98 887 aa13.54□□□□□ -0.24
YBX3-203ENST00000366286 ARHGAP27Q6ZUM4 889 aa13.54□□□□□ -0.24
YBX3-203ENST00000366286 NIP7Q9Y221 180 aaKnown RBP eCLIP13.54□□□□□ -0.24
YBX3-203ENST00000366286 MAP3K15Q6ZN16 1313 aa13.54□□□□□ -0.24
YBX3-203ENST00000366286 DICER1Q9UPY3 1922 aaKnown RBP13.54□□□□□ -0.24
YBX3-203ENST00000366286 PROSER3Q2NL68 480 aa13.53□□□□□ -0.24
YBX3-203ENST00000366286 KIF6Q6ZMV9 814 aa13.53□□□□□ -0.24
YBX3-203ENST00000366286 LRP10Q7Z4F1 713 aa13.53□□□□□ -0.24
YBX3-203ENST00000366286 NBPF5PQ86XG9 351 aaPredicted RBP13.53□□□□□ -0.24
YBX3-203ENST00000366286 BRIP1Q9BX63 1249 aa13.53□□□□□ -0.24
YBX3-203ENST00000366286 MRS2Q9HD23 443 aa13.53□□□□□ -0.24
YBX3-203ENST00000366286 ERVV-1B6SEH8 477 aa13.52□□□□□ -0.25
YBX3-203ENST00000366286 H0YIN7 160 aa13.52□□□□□ -0.25
YBX3-203ENST00000366286 ANXA1P04083 346 aa13.52□□□□□ -0.25
YBX3-203ENST00000366286 PDE6BP35913 854 aa13.52□□□□□ -0.25
YBX3-203ENST00000366286 PDIA6Q15084 440 aa13.52□□□□□ -0.25
YBX3-203ENST00000366286 NECTIN2Q92692 538 aa13.52□□□□□ -0.25
YBX3-203ENST00000366286 CFAP44Q96MT7 982 aa13.52□□□□□ -0.25
YBX3-203ENST00000366286 ZBTB3Q9H5J0 574 aa13.52□□□□□ -0.25
YBX3-203ENST00000366286 MBIPQ9NS73 344 aa13.52□□□□□ -0.25
YBX3-203ENST00000366286 TTLL6Q8N841 843 aa13.51□□□□□ -0.25
YBX3-203ENST00000366286 ABCC12Q96J65 1359 aa13.5□□□□□ -0.25
YBX3-203ENST00000366286 IBTKQ9P2D0 1353 aaPredicted RBP13.5□□□□□ -0.25
YBX3-203ENST00000366286 UBN2Q6ZU65 1347 aa13.5□□□□□ -0.25
YBX3-203ENST00000366286 FAM177BA6PVY3 158 aa13.5□□□□□ -0.25
YBX3-203ENST00000366286 ZNF853P0CG23 659 aa13.5□□□□□ -0.25
YBX3-203ENST00000366286 ZNF622Q969S3 477 aaKnown RBP eCLIP13.5□□□□□ -0.25
YBX3-203ENST00000366286 IFT57Q9NWB7 429 aa13.5□□□□□ -0.25
YBX3-203ENST00000366286 PDZRN3Q9UPQ7 1066 aa13.5□□□□□ -0.25
YBX3-203ENST00000366286 SENP3-EIF4A1A0A087X0R7 540 aa13.49□□□□□ -0.25
YBX3-203ENST00000366286 HOXB7P09629 217 aa13.49□□□□□ -0.25
YBX3-203ENST00000366286 CALD1Q05682 793 aaKnown RBP13.49□□□□□ -0.25
YBX3-203ENST00000366286 GIGYF2Q6Y7W6 1299 aaKnown RBP13.49□□□□□ -0.25
YBX3-203ENST00000366286 ZNF526Q8TF50 670 aaPredicted RBP13.49□□□□□ -0.25
YBX3-203ENST00000366286 DDX60Q8IY21 1712 aaKnown RBP13.49□□□□□ -0.25
YBX3-203ENST00000366286 SRGNP10124 158 aa13.48□□□□□ -0.25
YBX3-203ENST00000366286 GPTP24298 496 aa13.48□□□□□ -0.25
YBX3-203ENST00000366286 GNAI1P63096 354 aa13.48□□□□□ -0.25
YBX3-203ENST00000366286 RASSF7Q02833 373 aa13.48□□□□□ -0.25
YBX3-203ENST00000366286 HDGFL1Q5TGJ6 251 aa13.48□□□□□ -0.25
YBX3-203ENST00000366286 C9orf131Q5VYM1 1079 aa13.48□□□□□ -0.25
YBX3-203ENST00000366286 DUSP27Q5VZP5 1158 aa13.48□□□□□ -0.25
YBX3-203ENST00000366286 TPTE2Q6XPS3 522 aa13.48□□□□□ -0.25
YBX3-203ENST00000366286 DDX21Q9NR30 783 aaKnown RBP eCLIP13.48□□□□□ -0.25
YBX3-203ENST00000366286 CHPF2Q9P2E5 772 aa13.48□□□□□ -0.25
YBX3-203ENST00000366286 RIC1Q4ADV7 1423 aa13.47□□□□□ -0.25
YBX3-203ENST00000366286 STYK1Q6J9G0 422 aa13.47□□□□□ -0.25
YBX3-203ENST00000366286 NUTM1Q86Y26 1132 aa13.47□□□□□ -0.25
YBX3-203ENST00000366286 XAGE3Q8WTP9 111 aa13.47□□□□□ -0.25
YBX3-203ENST00000366286 MASTLQ96GX5 879 aa13.47□□□□□ -0.25
YBX3-203ENST00000366286 NYXQ9GZU5 481 aa13.47□□□□□ -0.25
YBX3-203ENST00000366286 GPBP1L1Q9HC44 474 aaPredicted RBP13.47□□□□□ -0.25
YBX3-203ENST00000366286 AIMP1Q12904 312 aaKnown RBP13.46□□□□□ -0.25
YBX3-203ENST00000366286 CCDC27Q2M243 656 aa13.46□□□□□ -0.25
YBX3-203ENST00000366286 PRPF40BQ6NWY9 871 aaKnown RBP13.46□□□□□ -0.25
YBX3-203ENST00000366286 COPS6Q7L5N1 327 aa13.46□□□□□ -0.25
YBX3-203ENST00000366286 ZNF34Q8IZ26 560 aa13.46□□□□□ -0.25
YBX3-203ENST00000366286 CNKSR1Q969H4 720 aa13.46□□□□□ -0.25
YBX3-203ENST00000366286 RNF181Q9P0P0 153 aa13.46□□□□□ -0.25
YBX3-203ENST00000366286 ZNF219Q9P2Y4 722 aaPredicted RBP13.46□□□□□ -0.25
YBX3-203ENST00000366286 CACNA1FO60840 1977 aa13.45□□□□□ -0.26
YBX3-203ENST00000366286 KLRG2A4D1S0 409 aaPredicted RBP13.45□□□□□ -0.26
YBX3-203ENST00000366286 NFKBIEO00221 500 aa13.45□□□□□ -0.26
YBX3-203ENST00000366286 C21orf2O43822 256 aa13.45□□□□□ -0.26
YBX3-203ENST00000366286 NTSR2O95665 410 aa13.45□□□□□ -0.26
YBX3-203ENST00000366286 GTF2E1P29083 439 aaPredicted RBP13.45□□□□□ -0.26
YBX3-203ENST00000366286 ERFEQ4G0M1 354 aa13.45□□□□□ -0.26
YBX3-203ENST00000366286 SUSD4Q5VX71 490 aa13.45□□□□□ -0.26
YBX3-203ENST00000366286 DBF4Q9UBU7 674 aaPredicted RBP13.45□□□□□ -0.26
YBX3-203ENST00000366286 TAF1P21675 1872 aa13.44□□□□□ -0.26
YBX3-203ENST00000366286 NPR1P16066 1061 aa13.44□□□□□ -0.26
YBX3-203ENST00000366286 PRELPP51888 382 aa13.44□□□□□ -0.26
YBX3-203ENST00000366286 WWC1Q8IX03 1113 aa13.44□□□□□ -0.26
YBX3-203ENST00000366286 ELL2O00472 640 aaPredicted RBP13.43□□□□□ -0.26
YBX3-203ENST00000366286 C1QTNF8P60827 252 aa13.43□□□□□ -0.26
YBX3-203ENST00000366286 PARP10Q53GL7 1025 aa13.43□□□□□ -0.26
YBX3-203ENST00000366286 PPP1R42Q7Z4L9 355 aa13.43□□□□□ -0.26
YBX3-203ENST00000366286 C8orf58Q8NAV2 365 aa13.43□□□□□ -0.26
YBX3-203ENST00000366286 TSR2Q969E8 191 aaKnown RBP13.43□□□□□ -0.26
YBX3-203ENST00000366286 LMNB1P20700 586 aa13.42□□□□□ -0.26
YBX3-203ENST00000366286 CRY2Q49AN0 593 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms