RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 RUNDC1Q96C34 613 aa18■□□□□ 0.47
TNFRSF1A-202ENST00000366159 ZNF652Q9Y2D9 606 aa18■□□□□ 0.47
TNFRSF1A-202ENST00000366159 KLRG2A4D1S0 409 aaPredicted RBP17.99■□□□□ 0.47
TNFRSF1A-202ENST00000366159 ERVV-1B6SEH8 477 aa17.99■□□□□ 0.47
TNFRSF1A-202ENST00000366159 SRGNP10124 158 aa17.99■□□□□ 0.47
TNFRSF1A-202ENST00000366159 LMOD3Q0VAK6 560 aa17.99■□□□□ 0.47
TNFRSF1A-202ENST00000366159 LRP10Q7Z4F1 713 aa17.99■□□□□ 0.47
TNFRSF1A-202ENST00000366159 CCDC146Q8IYE0 955 aa17.99■□□□□ 0.47
TNFRSF1A-202ENST00000366159 TSPYL4Q9UJ04 414 aa17.99■□□□□ 0.47
TNFRSF1A-202ENST00000366159 TRIM35Q9UPQ4 493 aa17.99■□□□□ 0.47
TNFRSF1A-202ENST00000366159 RRP7AQ9Y3A4 280 aaKnown RBP17.98■□□□□ 0.47
TNFRSF1A-202ENST00000366159 ERBB4Q15303 1308 aa17.98■□□□□ 0.47
TNFRSF1A-202ENST00000366159 SENP3-EIF4A1A0A087X0R7 540 aa17.98■□□□□ 0.47
TNFRSF1A-202ENST00000366159 CHL1O00533 1208 aa17.98■□□□□ 0.47
TNFRSF1A-202ENST00000366159 ST5P78524 1137 aa17.98■□□□□ 0.47
TNFRSF1A-202ENST00000366159 RASSF7Q02833 373 aa17.98■□□□□ 0.47
TNFRSF1A-202ENST00000366159 PDIA6Q15084 440 aa17.98■□□□□ 0.47
TNFRSF1A-202ENST00000366159 STYK1Q6J9G0 422 aa17.98■□□□□ 0.47
TNFRSF1A-202ENST00000366159 NBPF5PQ86XG9 351 aaPredicted RBP17.98■□□□□ 0.47
TNFRSF1A-202ENST00000366159 RNF181Q9P0P0 153 aa17.98■□□□□ 0.47
TNFRSF1A-202ENST00000366159 NIP7Q9Y221 180 aaKnown RBP eCLIP17.98■□□□□ 0.47
TNFRSF1A-202ENST00000366159 MAP3K15Q6ZN16 1313 aa17.97■□□□□ 0.47
TNFRSF1A-202ENST00000366159 NUP98P52948 1817 aa17.97■□□□□ 0.47
TNFRSF1A-202ENST00000366159 NFKBIEO00221 500 aa17.97■□□□□ 0.47
TNFRSF1A-202ENST00000366159 WDR43Q15061 677 aaKnown RBP eCLIP17.97■□□□□ 0.47
TNFRSF1A-202ENST00000366159 TPTE2Q6XPS3 522 aa17.97■□□□□ 0.47
TNFRSF1A-202ENST00000366159 TTLL7Q6ZT98 887 aa17.97■□□□□ 0.47
TNFRSF1A-202ENST00000366159 ZNF622Q969S3 477 aaKnown RBP eCLIP17.97■□□□□ 0.47
TNFRSF1A-202ENST00000366159 ARFGEF2Q9Y6D5 1785 aa17.96■□□□□ 0.47
TNFRSF1A-202ENST00000366159 FER1L6Q2WGJ9 1857 aa17.96■□□□□ 0.46
TNFRSF1A-202ENST00000366159 SLX4Q8IY92 1834 aa17.95■□□□□ 0.46
TNFRSF1A-202ENST00000366159 MYL6BP14649 208 aa17.95■□□□□ 0.46
TNFRSF1A-202ENST00000366159 LMNB1P20700 586 aa17.95■□□□□ 0.46
TNFRSF1A-202ENST00000366159 NEUROD2Q15784 382 aa17.95■□□□□ 0.46
TNFRSF1A-202ENST00000366159 NGEFQ8N5V2 710 aa17.95■□□□□ 0.46
TNFRSF1A-202ENST00000366159 CNKSR1Q969H4 720 aa17.95■□□□□ 0.46
TNFRSF1A-202ENST00000366159 MASTLQ96GX5 879 aa17.95■□□□□ 0.46
TNFRSF1A-202ENST00000366159 NMRK2Q9NPI5 230 aa17.95■□□□□ 0.46
TNFRSF1A-202ENST00000366159 ZC3H4Q9UPT8 1303 aaKnown RBP17.95■□□□□ 0.46
TNFRSF1A-202ENST00000366159 C21orf2O43822 256 aa17.94■□□□□ 0.46
TNFRSF1A-202ENST00000366159 C7orf43Q8WVR3 580 aa17.94■□□□□ 0.46
TNFRSF1A-202ENST00000366159 ZEB1P37275 1124 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF1A-202ENST00000366159 PRPF40BQ6NWY9 871 aaKnown RBP17.93■□□□□ 0.46
TNFRSF1A-202ENST00000366159 ZNF34Q8IZ26 560 aa17.93■□□□□ 0.46
TNFRSF1A-202ENST00000366159 LTBP3Q9NS15 1303 aa17.93■□□□□ 0.46
TNFRSF1A-202ENST00000366159 CCDC88AQ3V6T2 1871 aa17.92■□□□□ 0.46
TNFRSF1A-202ENST00000366159 NPHP1O15259 732 aa17.92■□□□□ 0.46
TNFRSF1A-202ENST00000366159 TOMM70O94826 608 aa17.92■□□□□ 0.46
TNFRSF1A-202ENST00000366159 NPR1P16066 1061 aa17.92■□□□□ 0.46
TNFRSF1A-202ENST00000366159 PROSER3Q2NL68 480 aa17.92■□□□□ 0.46
TNFRSF1A-202ENST00000366159 GIGYF2Q6Y7W6 1299 aaKnown RBP17.92■□□□□ 0.46
TNFRSF1A-202ENST00000366159 KIF6Q6ZMV9 814 aa17.92■□□□□ 0.46
TNFRSF1A-202ENST00000366159 UBN2Q6ZU65 1347 aa17.92■□□□□ 0.46
TNFRSF1A-202ENST00000366159 IBTKQ9P2D0 1353 aaPredicted RBP17.92■□□□□ 0.46
TNFRSF1A-202ENST00000366159 EIF2S2P20042 333 aaKnown RBP17.91■□□□□ 0.46
TNFRSF1A-202ENST00000366159 ZBTB3Q9H5J0 574 aa17.91■□□□□ 0.46
TNFRSF1A-202ENST00000366159 TNRC6CQ9HCJ0 1690 aaKnown RBP17.9■□□□□ 0.46
TNFRSF1A-202ENST00000366159 RIC1Q4ADV7 1423 aa17.9■□□□□ 0.46
TNFRSF1A-202ENST00000366159 KDM2BQ8NHM5 1336 aa17.9■□□□□ 0.46
TNFRSF1A-202ENST00000366159 ZNF853P0CG23 659 aa17.9■□□□□ 0.46
TNFRSF1A-202ENST00000366159 HSPA6P17066 643 aa17.9■□□□□ 0.46
TNFRSF1A-202ENST00000366159 KRT24Q2M2I5 525 aa17.9■□□□□ 0.46
TNFRSF1A-202ENST00000366159 CRY2Q49AN0 593 aa17.9■□□□□ 0.46
TNFRSF1A-202ENST00000366159 NYXQ9GZU5 481 aa17.9■□□□□ 0.46
TNFRSF1A-202ENST00000366159 CACNA1SQ13698 1873 aa17.9■□□□□ 0.46
TNFRSF1A-202ENST00000366159 ABCC12Q96J65 1359 aa17.89■□□□□ 0.45
TNFRSF1A-202ENST00000366159 DICER1Q9UPY3 1922 aaKnown RBP17.89■□□□□ 0.45
TNFRSF1A-202ENST00000366159 GLTPD2A6NH11 291 aa17.89■□□□□ 0.45
TNFRSF1A-202ENST00000366159 FAM177BA6PVY3 158 aa17.89■□□□□ 0.45
TNFRSF1A-202ENST00000366159 SUSD4Q5VX71 490 aa17.89■□□□□ 0.45
TNFRSF1A-202ENST00000366159 CFAP44Q96MT7 982 aa17.89■□□□□ 0.45
TNFRSF1A-202ENST00000366159 ZNF219Q9P2Y4 722 aaPredicted RBP17.89■□□□□ 0.45
TNFRSF1A-202ENST00000366159 TIAM2Q8IVF5 1701 aa17.89■□□□□ 0.45
TNFRSF1A-202ENST00000366159 ANXA1P04083 346 aa17.88■□□□□ 0.45
TNFRSF1A-202ENST00000366159 ERFEQ4G0M1 354 aa17.88■□□□□ 0.45
TNFRSF1A-202ENST00000366159 NUTM1Q86Y26 1132 aa17.88■□□□□ 0.45
TNFRSF1A-202ENST00000366159 APAF1O14727 1248 aa17.87■□□□□ 0.45
TNFRSF1A-202ENST00000366159 NTSR2O95665 410 aa17.87■□□□□ 0.45
TNFRSF1A-202ENST00000366159 HOXB7P09629 217 aa17.87■□□□□ 0.45
TNFRSF1A-202ENST00000366159 GPTP24298 496 aa17.87■□□□□ 0.45
TNFRSF1A-202ENST00000366159 CCDC184Q52MB2 194 aa17.87■□□□□ 0.45
TNFRSF1A-202ENST00000366159 SOGA3Q5TF21 947 aa17.87■□□□□ 0.45
TNFRSF1A-202ENST00000366159 RRAGCQ9HB90 399 aa17.87■□□□□ 0.45
TNFRSF1A-202ENST00000366159 DDX21Q9NR30 783 aaKnown RBP eCLIP17.87■□□□□ 0.45
TNFRSF1A-202ENST00000366159 SNED1Q8TER0 1413 aa17.87■□□□□ 0.45
TNFRSF1A-202ENST00000366159 COPS6Q7L5N1 327 aa17.86■□□□□ 0.45
TNFRSF1A-202ENST00000366159 RBM46Q8TBY0 533 aaKnown RBP17.86■□□□□ 0.45
TNFRSF1A-202ENST00000366159 TAOK3Q9H2K8 898 aa17.86■□□□□ 0.45
TNFRSF1A-202ENST00000366159 LAS1LQ9Y4W2 734 aaKnown RBP17.86■□□□□ 0.45
TNFRSF1A-202ENST00000366159 POTECB2RU33 542 aa17.85■□□□□ 0.45
TNFRSF1A-202ENST00000366159 GTF2E1P29083 439 aaPredicted RBP17.85■□□□□ 0.45
TNFRSF1A-202ENST00000366159 ALDH1B1P30837 517 aa17.85■□□□□ 0.45
TNFRSF1A-202ENST00000366159 HOXA10P31260 410 aaPredicted RBP17.85■□□□□ 0.45
TNFRSF1A-202ENST00000366159 PARP10Q53GL7 1025 aa17.85■□□□□ 0.45
TNFRSF1A-202ENST00000366159 MBIPQ9NS73 344 aa17.85■□□□□ 0.45
TNFRSF1A-202ENST00000366159 SLC10A5Q5PT55 438 aa17.84■□□□□ 0.45
TNFRSF1A-202ENST00000366159 XAGE3Q8WTP9 111 aa17.84■□□□□ 0.45
TNFRSF1A-202ENST00000366159 NECTIN2Q92692 538 aa17.84■□□□□ 0.45
TNFRSF1A-202ENST00000366159 CCDC93Q567U6 631 aa17.83■□□□□ 0.44
TNFRSF1A-202ENST00000366159 OLFM4Q6UX06 510 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms