RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 PLPP7Q8NBV4 271 aa5.97□□□□□ -1.45
RNU6-238P-201ENST00000363313 ZNF417Q8TAU3 575 aa5.97□□□□□ -1.45
RNU6-238P-201ENST00000363313 ZNF587Q96SQ5 575 aaPredicted RBP5.97□□□□□ -1.45
RNU6-238P-201ENST00000363313 STRN4Q9NRL3 753 aa5.97□□□□□ -1.45
RNU6-238P-201ENST00000363313 EML1O00423 815 aa5.96□□□□□ -1.46
RNU6-238P-201ENST00000363313 KCNQ4P56696 695 aa5.96□□□□□ -1.46
RNU6-238P-201ENST00000363313 NEUROD4Q9HD90 331 aa5.96□□□□□ -1.46
RNU6-238P-201ENST00000363313 SCHIP1Q9P0W5 487 aaPredicted RBP5.96□□□□□ -1.46
RNU6-238P-201ENST00000363313 STARD13Q9Y3M8 1113 aa5.96□□□□□ -1.46
RNU6-238P-201ENST00000363313 NID1P14543 1247 aa5.95□□□□□ -1.46
RNU6-238P-201ENST00000363313 IRF5Q13568 498 aa5.95□□□□□ -1.46
RNU6-238P-201ENST00000363313 ADGRE1Q14246 886 aa5.95□□□□□ -1.46
RNU6-238P-201ENST00000363313 NEUROD2Q15784 382 aa5.95□□□□□ -1.46
RNU6-238P-201ENST00000363313 C20orf204Q6ZNR8 217 aa5.95□□□□□ -1.46
RNU6-238P-201ENST00000363313 C7orf43Q8WVR3 580 aa5.95□□□□□ -1.46
RNU6-238P-201ENST00000363313 LENG1Q96BZ8 264 aaPredicted RBP5.95□□□□□ -1.46
RNU6-238P-201ENST00000363313 SERTAD1Q9UHV2 236 aa5.95□□□□□ -1.46
RNU6-238P-201ENST00000363313 PCDHGA11Q9Y5H2 935 aa5.95□□□□□ -1.46
RNU6-238P-201ENST00000363313 ELNP15502 786 aa5.94□□□□□ -1.46
RNU6-238P-201ENST00000363313 C1orf53Q5VUE5 145 aa5.94□□□□□ -1.46
RNU6-238P-201ENST00000363313 ANKIB1Q9P2G1 1089 aa5.94□□□□□ -1.46
RNU6-238P-201ENST00000363313 TBC1D2BQ9UPU7 963 aa5.94□□□□□ -1.46
RNU6-238P-201ENST00000363313 BTBD11A6QL63 1104 aa5.93□□□□□ -1.46
RNU6-238P-201ENST00000363313 NOS2P35228 1153 aa5.93□□□□□ -1.46
RNU6-238P-201ENST00000363313 SEMA3FQ13275 785 aa5.93□□□□□ -1.46
RNU6-238P-201ENST00000363313 SLC51AQ86UW1 340 aa5.93□□□□□ -1.46
RNU6-238P-201ENST00000363313 TXNRD3Q86VQ6 643 aa5.93□□□□□ -1.46
RNU6-238P-201ENST00000363313 L3MBTL2Q969R5 705 aa5.93□□□□□ -1.46
RNU6-238P-201ENST00000363313 LILRB5O75023 590 aa5.92□□□□□ -1.46
RNU6-238P-201ENST00000363313 ALBP02768 609 aa5.92□□□□□ -1.46
RNU6-238P-201ENST00000363313 ADH7P40394 386 aa5.92□□□□□ -1.46
RNU6-238P-201ENST00000363313 NFATC2IPQ8NCF5 419 aa5.92□□□□□ -1.46
RNU6-238P-201ENST00000363313 HYAL3O43820 417 aaPredicted RBP5.91□□□□□ -1.46
RNU6-238P-201ENST00000363313 TXLNAP40222 546 aa5.91□□□□□ -1.46
RNU6-238P-201ENST00000363313 HIRAP54198 1017 aaPredicted RBP5.91□□□□□ -1.46
RNU6-238P-201ENST00000363313 RAC1P63000 192 aa5.91□□□□□ -1.46
RNU6-238P-201ENST00000363313 SPEM2Q0P670 501 aa5.91□□□□□ -1.46
RNU6-238P-201ENST00000363313 SFSWAPQ12872 951 aaKnown RBP5.91□□□□□ -1.46
RNU6-238P-201ENST00000363313 MBTPS1Q14703 1052 aa5.91□□□□□ -1.46
RNU6-238P-201ENST00000363313 GRIK4Q16099 956 aa5.91□□□□□ -1.46
RNU6-238P-201ENST00000363313 EML3Q32P44 896 aa5.91□□□□□ -1.46
RNU6-238P-201ENST00000363313 TRAPPC3LQ5T215 181 aa5.91□□□□□ -1.46
RNU6-238P-201ENST00000363313 LRRC69Q6ZNQ3 347 aa5.91□□□□□ -1.46
RNU6-238P-201ENST00000363313 ZDHHC1Q8WTX9 485 aa5.91□□□□□ -1.46
RNU6-238P-201ENST00000363313 BCANQ96GW7 911 aa5.91□□□□□ -1.46
RNU6-238P-201ENST00000363313 NOD1Q9Y239 953 aa5.91□□□□□ -1.46
RNU6-238P-201ENST00000363313 USP3Q9Y6I4 520 aa5.91□□□□□ -1.46
RNU6-238P-201ENST00000363313 SELPP16109 830 aa5.9□□□□□ -1.46
RNU6-238P-201ENST00000363313 POTEAQ6S8J7 498 aa5.9□□□□□ -1.46
RNU6-238P-201ENST00000363313 ILDR2Q71H61 639 aa5.9□□□□□ -1.46
RNU6-238P-201ENST00000363313 SLC30A3Q99726 388 aa5.9□□□□□ -1.46
RNU6-238P-201ENST00000363313 GOLGA2P5Q9HBQ8 144 aa5.9□□□□□ -1.46
RNU6-238P-201ENST00000363313 A0A0A0MRY4 1105 aa5.89□□□□□ -1.47
RNU6-238P-201ENST00000363313 SERTM1A2A2V5 107 aa5.89□□□□□ -1.47
RNU6-238P-201ENST00000363313 EPHA4P54764 986 aa5.89□□□□□ -1.47
RNU6-238P-201ENST00000363313 VAC14Q08AM6 782 aa5.89□□□□□ -1.47
RNU6-238P-201ENST00000363313 DTWD1Q8N5C7 304 aa5.89□□□□□ -1.47
RNU6-238P-201ENST00000363313 SSBP4Q9BWG4 385 aaPredicted RBP5.89□□□□□ -1.47
RNU6-238P-201ENST00000363313 KCNH4Q9UQ05 1017 aa5.89□□□□□ -1.47
RNU6-238P-201ENST00000363313 PARP3Q9Y6F1 533 aa5.89□□□□□ -1.47
RNU6-238P-201ENST00000363313 FAM229AH3BQW9 127 aa5.88□□□□□ -1.47
RNU6-238P-201ENST00000363313 HIF1AQ16665 826 aa5.88□□□□□ -1.47
RNU6-238P-201ENST00000363313 RHPN1Q8TCX5 695 aa5.88□□□□□ -1.47
RNU6-238P-201ENST00000363313 ZNF358Q9NW07 568 aa5.88□□□□□ -1.47
RNU6-238P-201ENST00000363313 RNF112Q9ULX5 631 aa5.88□□□□□ -1.47
RNU6-238P-201ENST00000363313 GTF2IP78347 998 aa5.87□□□□□ -1.47
RNU6-238P-201ENST00000363313 PCSK7Q16549 785 aa5.87□□□□□ -1.47
RNU6-238P-201ENST00000363313 C8orf86Q6ZUL3 223 aa5.87□□□□□ -1.47
RNU6-238P-201ENST00000363313 SLC9A9Q8IVB4 645 aa5.87□□□□□ -1.47
RNU6-238P-201ENST00000363313 BRD7Q9NPI1 651 aa5.87□□□□□ -1.47
RNU6-238P-201ENST00000363313 ZNF232Q9UNY5 417 aa5.87□□□□□ -1.47
RNU6-238P-201ENST00000363313 CHMP3Q9Y3E7 222 aa5.87□□□□□ -1.47
RNU6-238P-201ENST00000363313 M0R2N6 131 aa5.86□□□□□ -1.47
RNU6-238P-201ENST00000363313 PSMA6P60900 246 aaKnown RBP5.86□□□□□ -1.47
RNU6-238P-201ENST00000363313 TRIM50Q86XT4 487 aa5.86□□□□□ -1.47
RNU6-238P-201ENST00000363313 CEP63Q96MT8 703 aa5.86□□□□□ -1.47
RNU6-238P-201ENST00000363313 BRPF1P55201 1214 aaPredicted RBP5.85□□□□□ -1.47
RNU6-238P-201ENST00000363313 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.85□□□□□ -1.47
RNU6-238P-201ENST00000363313 TP53INP1Q96A56 240 aa5.85□□□□□ -1.47
RNU6-238P-201ENST00000363313 C11orf16Q9NQ32 467 aa5.85□□□□□ -1.47
RNU6-238P-201ENST00000363313 TYRO3Q06418 890 aa5.84□□□□□ -1.47
RNU6-238P-201ENST00000363313 KRTAP19-1Q8IUB9 90 aa5.84□□□□□ -1.47
RNU6-238P-201ENST00000363313 FMR1NBQ8N0W7 255 aaPredicted RBP5.84□□□□□ -1.47
RNU6-238P-201ENST00000363313 STAG2Q8N3U4 1231 aa5.84□□□□□ -1.47
RNU6-238P-201ENST00000363313 KRTAP9-9Q9BYP9 154 aa5.84□□□□□ -1.47
RNU6-238P-201ENST00000363313 KRTAP9-4Q9BYQ2 154 aa5.84□□□□□ -1.47
RNU6-238P-201ENST00000363313 GDPD2Q9HCC8 539 aa5.84□□□□□ -1.47
RNU6-238P-201ENST00000363313 SKIP12755 728 aa5.83□□□□□ -1.48
RNU6-238P-201ENST00000363313 ATP1A2P50993 1020 aa5.83□□□□□ -1.48
RNU6-238P-201ENST00000363313 AFF1P51825 1210 aaKnown RBP5.83□□□□□ -1.48
RNU6-238P-201ENST00000363313 PSME1Q06323 249 aa5.83□□□□□ -1.48
RNU6-238P-201ENST00000363313 GAS2L2Q8NHY3 880 aa5.83□□□□□ -1.48
RNU6-238P-201ENST00000363313 TTC9Q92623 222 aa5.83□□□□□ -1.48
RNU6-238P-201ENST00000363313 ALG2Q9H553 416 aa5.83□□□□□ -1.48
RNU6-238P-201ENST00000363313 JPH1Q9HDC5 661 aaPredicted RBP5.83□□□□□ -1.48
RNU6-238P-201ENST00000363313 FRRS1LQ9P0K9 344 aa5.83□□□□□ -1.48
RNU6-238P-201ENST00000363313 SLC6A14Q9UN76 642 aa5.83□□□□□ -1.48
RNU6-238P-201ENST00000363313 COL17A1Q9UMD9 1497 aaPredicted RBP5.83□□□□□ -1.48
RNU6-238P-201ENST00000363313 SFI1A8K8P3 1242 aa5.82□□□□□ -1.48
RNU6-238P-201ENST00000363313 TXKP42681 527 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms