RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 CBX8Q9HC52 389 aa13.59□□□□□ -0.23
CNOT4-203ENST00000361528 PIK3R4Q99570 1358 aa13.58□□□□□ -0.24
CNOT4-203ENST00000361528 IL16Q14005 1332 aa13.58□□□□□ -0.24
CNOT4-203ENST00000361528 PSDA5PKW4 1024 aaPredicted RBP13.58□□□□□ -0.24
CNOT4-203ENST00000361528 MNAT1P51948 309 aa13.58□□□□□ -0.24
CNOT4-203ENST00000361528 LUZP1Q86V48 1076 aa13.58□□□□□ -0.24
CNOT4-203ENST00000361528 ZNF428Q96B54 188 aa13.58□□□□□ -0.24
CNOT4-203ENST00000361528 NBPF3Q9H094 633 aa13.58□□□□□ -0.24
CNOT4-203ENST00000361528 ARFGAP3Q9NP61 516 aa13.58□□□□□ -0.24
CNOT4-203ENST00000361528 PHLPP2Q6ZVD8 1323 aa13.58□□□□□ -0.24
CNOT4-203ENST00000361528 SASH3O75995 380 aa13.58□□□□□ -0.24
CNOT4-203ENST00000361528 CCDC144BQ3MJ40 725 aa13.58□□□□□ -0.24
CNOT4-203ENST00000361528 FMNL3Q8IVF7 1028 aa13.58□□□□□ -0.24
CNOT4-203ENST00000361528 CCDC144CPQ8IYA2 1237 aa13.58□□□□□ -0.24
CNOT4-203ENST00000361528 GPR161Q8N6U8 529 aaKnown RBP13.58□□□□□ -0.24
CNOT4-203ENST00000361528 RRP7AQ9Y3A4 280 aaKnown RBP13.58□□□□□ -0.24
CNOT4-203ENST00000361528 KDM5AP29375 1690 aaKnown RBP13.57□□□□□ -0.24
CNOT4-203ENST00000361528 ANKRD33BA6NCL7 494 aa13.57□□□□□ -0.24
CNOT4-203ENST00000361528 ZBTB7BO15156 539 aaPredicted RBP13.57□□□□□ -0.24
CNOT4-203ENST00000361528 GSDMDP57764 484 aa13.57□□□□□ -0.24
CNOT4-203ENST00000361528 GIMAP7Q8NHV1 300 aa13.57□□□□□ -0.24
CNOT4-203ENST00000361528 MIEF2Q96C03 454 aa13.57□□□□□ -0.24
CNOT4-203ENST00000361528 PDRG1Q9NUG6 133 aa13.57□□□□□ -0.24
CNOT4-203ENST00000361528 TARBP1Q13395 1621 aaKnown RBP13.57□□□□□ -0.24
CNOT4-203ENST00000361528 DISP1Q96F81 1524 aa13.57□□□□□ -0.24
CNOT4-203ENST00000361528 CCP110O43303 1012 aa13.56□□□□□ -0.24
CNOT4-203ENST00000361528 TADA3O75528 432 aa13.56□□□□□ -0.24
CNOT4-203ENST00000361528 CCZ1BP86790 482 aa13.56□□□□□ -0.24
CNOT4-203ENST00000361528 CCZ1P86791 482 aaPredicted RBP13.56□□□□□ -0.24
CNOT4-203ENST00000361528 GNL3LQ9NVN8 582 aaKnown RBP13.56□□□□□ -0.24
CNOT4-203ENST00000361528 MYO5CQ9NQX4 1742 aa13.56□□□□□ -0.24
CNOT4-203ENST00000361528 NUP62CLQ9H1M0 184 aa13.56□□□□□ -0.24
CNOT4-203ENST00000361528 TTC41PQ6P2S7 1318 aa13.55□□□□□ -0.24
CNOT4-203ENST00000361528 PPFIA4O75335 1185 aa13.55□□□□□ -0.24
CNOT4-203ENST00000361528 EXOSC9Q06265 439 aaKnown RBP13.55□□□□□ -0.24
CNOT4-203ENST00000361528 TTLL5Q6EMB2 1281 aa13.55□□□□□ -0.24
CNOT4-203ENST00000361528 OTUD6BQ8N6M0 293 aa13.55□□□□□ -0.24
CNOT4-203ENST00000361528 TMCO5BA8MYB1 307 aa13.55□□□□□ -0.24
CNOT4-203ENST00000361528 ERLIN2O94905 339 aa13.55□□□□□ -0.24
CNOT4-203ENST00000361528 NEDD9Q14511 834 aa13.55□□□□□ -0.24
CNOT4-203ENST00000361528 GBP6Q6ZN66 633 aa13.55□□□□□ -0.24
CNOT4-203ENST00000361528 RBM43Q6ZSC3 357 aaKnown RBP13.55□□□□□ -0.24
CNOT4-203ENST00000361528 DDX11Q96FC9 970 aa13.55□□□□□ -0.24
CNOT4-203ENST00000361528 FUT8Q9BYC5 575 aa13.55□□□□□ -0.24
CNOT4-203ENST00000361528 CCDC69A6NI79 296 aa13.54□□□□□ -0.24
CNOT4-203ENST00000361528 SEC31AO94979 1220 aaKnown RBP13.54□□□□□ -0.24
CNOT4-203ENST00000361528 F13A1P00488 732 aa13.54□□□□□ -0.24
CNOT4-203ENST00000361528 LRRFIP1Q32MZ4 808 aaKnown RBP13.54□□□□□ -0.24
CNOT4-203ENST00000361528 ANO6Q4KMQ2 910 aa13.54□□□□□ -0.24
CNOT4-203ENST00000361528 ARHGAP45Q92619 1136 aa13.54□□□□□ -0.24
CNOT4-203ENST00000361528 TRAK1Q9UPV9 953 aa13.54□□□□□ -0.24
CNOT4-203ENST00000361528 IFT140Q96RY7 1462 aa13.54□□□□□ -0.24
CNOT4-203ENST00000361528 MAP2K7O14733 419 aa13.54□□□□□ -0.24
CNOT4-203ENST00000361528 NUTM1Q86Y26 1132 aa13.54□□□□□ -0.24
CNOT4-203ENST00000361528 MICALL1Q8N3F8 863 aa13.54□□□□□ -0.24
CNOT4-203ENST00000361528 FAXDC2Q96IV6 333 aa13.54□□□□□ -0.24
CNOT4-203ENST00000361528 CALR3Q96L12 384 aaKnown RBP13.54□□□□□ -0.24
CNOT4-203ENST00000361528 DNAI1Q9UI46 699 aa13.54□□□□□ -0.24
CNOT4-203ENST00000361528 TTC21BQ7Z4L5 1316 aa13.53□□□□□ -0.24
CNOT4-203ENST00000361528 CTAGE5O15320 804 aa13.53□□□□□ -0.24
CNOT4-203ENST00000361528 SRGAP3O43295 1099 aa13.53□□□□□ -0.24
CNOT4-203ENST00000361528 EPB41L2O43491 1005 aaKnown RBP13.53□□□□□ -0.24
CNOT4-203ENST00000361528 EIF3JO75822 258 aaKnown RBP13.53□□□□□ -0.24
CNOT4-203ENST00000361528 SDSP20132 328 aa13.53□□□□□ -0.24
CNOT4-203ENST00000361528 HNRNPH1P31943 449 aaKnown RBP13.53□□□□□ -0.24
CNOT4-203ENST00000361528 DDR1Q08345 913 aa13.53□□□□□ -0.24
CNOT4-203ENST00000361528 FOXD4L6Q3SYB3 417 aaPredicted RBP13.53□□□□□ -0.24
CNOT4-203ENST00000361528 FOXD4L3Q6VB84 417 aaPredicted RBP13.53□□□□□ -0.24
CNOT4-203ENST00000361528 TRMT1Q9NXH9 659 aaKnown RBP13.53□□□□□ -0.24
CNOT4-203ENST00000361528 IMPACTQ9P2X3 320 aa13.53□□□□□ -0.24
CNOT4-203ENST00000361528 CEP152O94986 1710 aa13.53□□□□□ -0.24
CNOT4-203ENST00000361528 PLA2R1Q13018 1463 aa13.53□□□□□ -0.24
CNOT4-203ENST00000361528 SSH2Q76I76 1423 aa13.53□□□□□ -0.24
CNOT4-203ENST00000361528 STX6O43752 255 aa13.52□□□□□ -0.24
CNOT4-203ENST00000361528 FIBPO43427 364 aa13.52□□□□□ -0.25
CNOT4-203ENST00000361528 NRDCO43847 1150 aa13.52□□□□□ -0.25
CNOT4-203ENST00000361528 ELF1P32519 619 aa13.52□□□□□ -0.25
CNOT4-203ENST00000361528 BRD3Q15059 726 aa13.52□□□□□ -0.25
CNOT4-203ENST00000361528 TEX11Q8IYF3 940 aa13.52□□□□□ -0.25
CNOT4-203ENST00000361528 LRRN4CLQ8ND94 238 aa13.52□□□□□ -0.25
CNOT4-203ENST00000361528 CCDC34Q96HJ3 373 aa13.52□□□□□ -0.25
CNOT4-203ENST00000361528 PPP1R13BQ96KQ4 1090 aa13.52□□□□□ -0.25
CNOT4-203ENST00000361528 DCTPP1Q9H773 170 aa13.52□□□□□ -0.25
CNOT4-203ENST00000361528 DDX19AQ9NUU7 478 aaKnown RBP13.52□□□□□ -0.25
CNOT4-203ENST00000361528 FAM135BQ49AJ0 1406 aa13.52□□□□□ -0.25
CNOT4-203ENST00000361528 C9orf84Q5VXU9 1444 aa13.52□□□□□ -0.25
CNOT4-203ENST00000361528 ZNF518AQ6AHZ1 1483 aa13.51□□□□□ -0.25
CNOT4-203ENST00000361528 KIF24Q5T7B8 1368 aa13.51□□□□□ -0.25
CNOT4-203ENST00000361528 CCDC151A5D8V7 595 aa13.51□□□□□ -0.25
CNOT4-203ENST00000361528 MPHOSPH10O00566 681 aaKnown RBP13.51□□□□□ -0.25
CNOT4-203ENST00000361528 LRRC31Q6UY01 552 aa13.51□□□□□ -0.25
CNOT4-203ENST00000361528 POTEDQ86YR6 584 aa13.51□□□□□ -0.25
CNOT4-203ENST00000361528 SIRT2Q8IXJ6 389 aa13.51□□□□□ -0.25
CNOT4-203ENST00000361528 PTCH1Q13635 1447 aa13.51□□□□□ -0.25
CNOT4-203ENST00000361528 TCHHQ07283 1943 aa13.51□□□□□ -0.25
CNOT4-203ENST00000361528 H3BQF6 201 aa13.51□□□□□ -0.25
CNOT4-203ENST00000361528 GCFC2P16383 781 aaKnown RBP13.51□□□□□ -0.25
CNOT4-203ENST00000361528 SCP2P22307 547 aa13.51□□□□□ -0.25
CNOT4-203ENST00000361528 ZNF165P49910 485 aa13.51□□□□□ -0.25
CNOT4-203ENST00000361528 ETF1P62495 437 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms