RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 NPM2Q86SE8 214 aaKnown RBP15.83■□□□□ 0.12
NIF3L1-201ENST00000359683 TFCP2L1Q9NZI6 479 aa15.83■□□□□ 0.12
NIF3L1-201ENST00000359683 UBR3Q6ZT12 1888 aa15.82■□□□□ 0.12
NIF3L1-201ENST00000359683 COL15A1P39059 1388 aa15.82■□□□□ 0.12
NIF3L1-201ENST00000359683 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.82■□□□□ 0.12
NIF3L1-201ENST00000359683 IPO8O15397 1037 aaKnown RBP15.82■□□□□ 0.12
NIF3L1-201ENST00000359683 ANKRD13DQ6ZTN6 518 aa15.82■□□□□ 0.12
NIF3L1-201ENST00000359683 ARHGEF1Q92888 912 aaKnown RBP15.82■□□□□ 0.12
NIF3L1-201ENST00000359683 ZNF330Q9Y3S2 320 aaPredicted RBP15.82■□□□□ 0.12
NIF3L1-201ENST00000359683 RNF123Q5XPI4 1314 aa15.82■□□□□ 0.12
NIF3L1-201ENST00000359683 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
NIF3L1-201ENST00000359683 DDX58O95786 925 aaKnown RBP15.81■□□□□ 0.12
NIF3L1-201ENST00000359683 YY1P25490 414 aa15.81■□□□□ 0.12
NIF3L1-201ENST00000359683 FKBP5Q13451 457 aaPredicted RBP15.81■□□□□ 0.12
NIF3L1-201ENST00000359683 DZIP3Q86Y13 1208 aaKnown RBP15.81■□□□□ 0.12
NIF3L1-201ENST00000359683 FLAD1Q8NFF5 587 aa15.81■□□□□ 0.12
NIF3L1-201ENST00000359683 PLBD2Q8NHP8 589 aa15.81■□□□□ 0.12
NIF3L1-201ENST00000359683 FRAT1Q92837 279 aaPredicted RBP15.81■□□□□ 0.12
NIF3L1-201ENST00000359683 ERVV-1B6SEH8 477 aa15.8■□□□□ 0.12
NIF3L1-201ENST00000359683 ZKSCAN2Q63HK3 967 aa15.8■□□□□ 0.12
NIF3L1-201ENST00000359683 KSR2Q6VAB6 950 aa15.8■□□□□ 0.12
NIF3L1-201ENST00000359683 ATF7IPQ6VMQ6 1270 aa15.8■□□□□ 0.12
NIF3L1-201ENST00000359683 MTFR1LQ9H019 292 aa15.8■□□□□ 0.12
NIF3L1-201ENST00000359683 TBC1D2BQ9UPU7 963 aa15.8■□□□□ 0.12
NIF3L1-201ENST00000359683 SUPT16HQ9Y5B9 1047 aaKnown RBP15.8■□□□□ 0.12
NIF3L1-201ENST00000359683 MAP3K15Q6ZN16 1313 aa15.79■□□□□ 0.12
NIF3L1-201ENST00000359683 PI4KAP2A4QPH2 592 aa15.79■□□□□ 0.12
NIF3L1-201ENST00000359683 PI4KAP1Q8N8J0 262 aa15.79■□□□□ 0.12
NIF3L1-201ENST00000359683 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.79■□□□□ 0.12
NIF3L1-201ENST00000359683 API5Q9BZZ5 524 aaKnown RBP15.79■□□□□ 0.12
NIF3L1-201ENST00000359683 NARFQ9UHQ1 456 aa15.79■□□□□ 0.12
NIF3L1-201ENST00000359683 ADCY9O60503 1353 aa15.79■□□□□ 0.12
NIF3L1-201ENST00000359683 RGL2O15211 777 aa15.79■□□□□ 0.12
NIF3L1-201ENST00000359683 PHF14O94880 888 aa15.79■□□□□ 0.12
NIF3L1-201ENST00000359683 CAMTA2O94983 1202 aa15.79■□□□□ 0.12
NIF3L1-201ENST00000359683 RFC4P35249 363 aa15.79■□□□□ 0.12
NIF3L1-201ENST00000359683 KIF6Q6ZMV9 814 aa15.79■□□□□ 0.12
NIF3L1-201ENST00000359683 COL23A1Q86Y22 540 aaPredicted RBP15.79■□□□□ 0.12
NIF3L1-201ENST00000359683 ARXQ96QS3 562 aa15.79■□□□□ 0.12
NIF3L1-201ENST00000359683 COL24A1Q17RW2 1714 aa15.78■□□□□ 0.12
NIF3L1-201ENST00000359683 PNPLA7Q6ZV29 1317 aa15.78■□□□□ 0.12
NIF3L1-201ENST00000359683 PLIN1O60240 522 aa15.78■□□□□ 0.12
NIF3L1-201ENST00000359683 TRIM27P14373 513 aa15.78■□□□□ 0.12
NIF3L1-201ENST00000359683 RRP1P56182 461 aaKnown RBP15.78■□□□□ 0.12
NIF3L1-201ENST00000359683 RIC3Q7Z5B4 369 aa15.78■□□□□ 0.12
NIF3L1-201ENST00000359683 MAP3K2Q9Y2U5 619 aa15.78■□□□□ 0.12
NIF3L1-201ENST00000359683 F6X3S4 739 aa15.77■□□□□ 0.12
NIF3L1-201ENST00000359683 HLFQ16534 295 aa15.77■□□□□ 0.12
NIF3L1-201ENST00000359683 GIGYF2Q6Y7W6 1299 aaKnown RBP15.77■□□□□ 0.12
NIF3L1-201ENST00000359683 DNAAF4Q8WXU2 420 aa15.77■□□□□ 0.12
NIF3L1-201ENST00000359683 ZBTB3Q9H5J0 574 aa15.77■□□□□ 0.12
NIF3L1-201ENST00000359683 USP42Q9H9J4 1324 aaKnown RBP15.76■□□□□ 0.11
NIF3L1-201ENST00000359683 ZPR1O75312 459 aa15.76■□□□□ 0.11
NIF3L1-201ENST00000359683 CLEC4GQ6UXB4 293 aa15.76■□□□□ 0.11
NIF3L1-201ENST00000359683 SGIP1Q9BQI5 828 aa15.76■□□□□ 0.11
NIF3L1-201ENST00000359683 METTL22Q9BUU2 404 aaPredicted RBP15.76■□□□□ 0.11
NIF3L1-201ENST00000359683 FHDC1Q9C0D6 1143 aaPredicted RBP15.76■□□□□ 0.11
NIF3L1-201ENST00000359683 BCL2L12Q9HB09 334 aa15.76■□□□□ 0.11
NIF3L1-201ENST00000359683 SRP68Q9UHB9 627 aaKnown RBP15.76■□□□□ 0.11
NIF3L1-201ENST00000359683 TNNQ9UQP3 1299 aa15.76■□□□□ 0.11
NIF3L1-201ENST00000359683 CHD4Q14839 1912 aa15.76■□□□□ 0.11
NIF3L1-201ENST00000359683 MS4A1P11836 297 aa15.76■□□□□ 0.11
NIF3L1-201ENST00000359683 TCIRG1Q13488 830 aa15.76■□□□□ 0.11
NIF3L1-201ENST00000359683 USPL1Q5W0Q7 1092 aa15.76■□□□□ 0.11
NIF3L1-201ENST00000359683 ABCC4O15439 1325 aa15.75■□□□□ 0.11
NIF3L1-201ENST00000359683 PDE3AQ14432 1141 aa15.75■□□□□ 0.11
NIF3L1-201ENST00000359683 DZIP1LQ8IYY4 767 aaKnown RBP15.75■□□□□ 0.11
NIF3L1-201ENST00000359683 C4AP0C0L4 1744 aa15.75■□□□□ 0.11
NIF3L1-201ENST00000359683 HSP90AB3PQ58FF7 597 aa15.74■□□□□ 0.11
NIF3L1-201ENST00000359683 BEND3Q5T5X7 828 aa15.74■□□□□ 0.11
NIF3L1-201ENST00000359683 CLUAP1Q96AJ1 413 aa15.74■□□□□ 0.11
NIF3L1-201ENST00000359683 SYT17Q9BSW7 474 aa15.74■□□□□ 0.11
NIF3L1-201ENST00000359683 NUP98P52948 1817 aa15.73■□□□□ 0.11
NIF3L1-201ENST00000359683 RLBP1P12271 317 aa15.73■□□□□ 0.11
NIF3L1-201ENST00000359683 GYS1P13807 737 aa15.73■□□□□ 0.11
NIF3L1-201ENST00000359683 TRIM28Q13263 835 aaKnown RBP15.73■□□□□ 0.11
NIF3L1-201ENST00000359683 INTS3Q68E01 1043 aaKnown RBP15.73■□□□□ 0.11
NIF3L1-201ENST00000359683 SLC4A10Q6U841 1118 aa15.73■□□□□ 0.11
NIF3L1-201ENST00000359683 ISCA1Q9BUE6 129 aa15.73■□□□□ 0.11
NIF3L1-201ENST00000359683 ZNF652Q9Y2D9 606 aa15.73■□□□□ 0.11
NIF3L1-201ENST00000359683 ARFGEF2Q9Y6D5 1785 aa15.73■□□□□ 0.11
NIF3L1-201ENST00000359683 ATP10DQ9P241 1426 aa15.73■□□□□ 0.11
NIF3L1-201ENST00000359683 BCORQ6W2J9 1755 aa15.72■□□□□ 0.11
NIF3L1-201ENST00000359683 IGKV5-2P06315 115 aa15.72■□□□□ 0.11
NIF3L1-201ENST00000359683 NEXNQ0ZGT2 675 aa15.72■□□□□ 0.11
NIF3L1-201ENST00000359683 C20orf194Q5TEA3 1177 aa15.72■□□□□ 0.11
NIF3L1-201ENST00000359683 ZNF34Q8IZ26 560 aa15.72■□□□□ 0.11
NIF3L1-201ENST00000359683 LINS1Q8NG48 757 aa15.72■□□□□ 0.11
NIF3L1-201ENST00000359683 MYD88Q99836 296 aa15.72■□□□□ 0.11
NIF3L1-201ENST00000359683 CCT4P50991 539 aaKnown RBP15.72■□□□□ 0.11
NIF3L1-201ENST00000359683 FKBP8Q14318 412 aa15.72■□□□□ 0.11
NIF3L1-201ENST00000359683 FTSJ3Q8IY81 847 aaKnown RBP15.72■□□□□ 0.11
NIF3L1-201ENST00000359683 PANK1Q8TE04 598 aa15.72■□□□□ 0.11
NIF3L1-201ENST00000359683 PXDNLA1KZ92 1463 aa15.71■□□□□ 0.11
NIF3L1-201ENST00000359683 SCN7AQ01118 1682 aa15.71■□□□□ 0.11
NIF3L1-201ENST00000359683 ATP5J2-PTCD1G3V325 749 aa15.71■□□□□ 0.11
NIF3L1-201ENST00000359683 ALDH1L1O75891 902 aa15.71■□□□□ 0.11
NIF3L1-201ENST00000359683 TMEM57Q8N5G2 664 aa15.71■□□□□ 0.11
NIF3L1-201ENST00000359683 SLC16A10Q8TF71 515 aa15.71■□□□□ 0.11
NIF3L1-201ENST00000359683 IBTKQ9P2D0 1353 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms