RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 LOC102724428A0A0B4J2F2 783 aa8.8□□□□□ -1
CCDC196-201ENST00000359454 EMP3P54852 163 aa8.8□□□□□ -1
CCDC196-201ENST00000359454 SIK1P57059 783 aa8.8□□□□□ -1
CCDC196-201ENST00000359454 C6orf132Q5T0Z8 1188 aa8.8□□□□□ -1
CCDC196-201ENST00000359454 AMIGO3Q86WK7 504 aa8.8□□□□□ -1
CCDC196-201ENST00000359454 SPG7Q9UQ90 795 aa8.8□□□□□ -1
CCDC196-201ENST00000359454 TOGARAM1Q9Y4F4 1720 aa8.8□□□□□ -1
CCDC196-201ENST00000359454 UTRNP46939 3433 aa8.79□□□□□ -1
CCDC196-201ENST00000359454 UBR3Q6ZT12 1888 aa8.79□□□□□ -1
CCDC196-201ENST00000359454 PTGDRQ13258 359 aa8.79□□□□□ -1
CCDC196-201ENST00000359454 HIC1Q14526 733 aa8.79□□□□□ -1
CCDC196-201ENST00000359454 CDCA8Q53HL2 280 aa8.79□□□□□ -1
CCDC196-201ENST00000359454 POTEGQ6S5H5 508 aa8.79□□□□□ -1
CCDC196-201ENST00000359454 SMIM5Q71RC9 77 aa8.79□□□□□ -1
CCDC196-201ENST00000359454 LINC00116Q8NCU8 138 aa8.79□□□□□ -1
CCDC196-201ENST00000359454 MARVELD3Q96A59 401 aa8.79□□□□□ -1
CCDC196-201ENST00000359454 TMOD3Q9NYL9 352 aa8.79□□□□□ -1
CCDC196-201ENST00000359454 WWC3Q9ULE0 1092 aa8.79□□□□□ -1
CCDC196-201ENST00000359454 ITGB4P16144 1822 aa8.79□□□□□ -1
CCDC196-201ENST00000359454 PKD1L3Q7Z443 1732 aa8.79□□□□□ -1
CCDC196-201ENST00000359454 NCAPD2Q15021 1401 aa8.79□□□□□ -1
CCDC196-201ENST00000359454 GNPATO15228 680 aa8.78□□□□□ -1
CCDC196-201ENST00000359454 APLP1P51693 650 aa8.78□□□□□ -1
CCDC196-201ENST00000359454 KRI1Q8N9T8 703 aaKnown RBP8.78□□□□□ -1
CCDC196-201ENST00000359454 BCL2L12Q9HB09 334 aa8.78□□□□□ -1
CCDC196-201ENST00000359454 CICQ96RK0 1608 aaPredicted RBP8.78□□□□□ -1
CCDC196-201ENST00000359454 KIF20BQ96Q89 1820 aa8.77□□□□□ -1
CCDC196-201ENST00000359454 MMP10P09238 476 aa8.77□□□□□ -1.01
CCDC196-201ENST00000359454 ATP6V1AP38606 617 aa8.77□□□□□ -1.01
CCDC196-201ENST00000359454 TGFB2P61812 414 aa8.77□□□□□ -1.01
CCDC196-201ENST00000359454 ITPK1Q13572 414 aa8.77□□□□□ -1.01
CCDC196-201ENST00000359454 VARS2Q5ST30 1063 aaKnown RBP8.77□□□□□ -1.01
CCDC196-201ENST00000359454 SLC24A3Q9HC58 644 aa8.77□□□□□ -1.01
CCDC196-201ENST00000359454 ASAP1Q9ULH1 1129 aa8.77□□□□□ -1.01
CCDC196-201ENST00000359454 EMILIN1Q9Y6C2 1016 aa8.77□□□□□ -1.01
CCDC196-201ENST00000359454 MAP2P11137 1827 aaKnown RBP8.77□□□□□ -1.01
CCDC196-201ENST00000359454 PPM1GO15355 546 aaPredicted RBP8.76□□□□□ -1.01
CCDC196-201ENST00000359454 TOMM70O94826 608 aa8.76□□□□□ -1.01
CCDC196-201ENST00000359454 IFNL2Q8IZJ0 200 aa8.76□□□□□ -1.01
CCDC196-201ENST00000359454 NLGN1Q8N2Q7 840 aa8.76□□□□□ -1.01
CCDC196-201ENST00000359454 NPDC1Q9NQX5 325 aaPredicted RBP8.76□□□□□ -1.01
CCDC196-201ENST00000359454 WASHC2AQ641Q2 1341 aa8.76□□□□□ -1.01
CCDC196-201ENST00000359454 PXDNLA1KZ92 1463 aa8.76□□□□□ -1.01
CCDC196-201ENST00000359454 PHKG2P15735 406 aa8.75□□□□□ -1.01
CCDC196-201ENST00000359454 PTPREP23469 700 aa8.75□□□□□ -1.01
CCDC196-201ENST00000359454 TRAPPC3LQ5T215 181 aa8.75□□□□□ -1.01
CCDC196-201ENST00000359454 ARHGAP27Q6ZUM4 889 aa8.75□□□□□ -1.01
CCDC196-201ENST00000359454 EYA1Q99502 592 aa8.75□□□□□ -1.01
CCDC196-201ENST00000359454 CARD14Q9BXL6 1004 aa8.75□□□□□ -1.01
CCDC196-201ENST00000359454 ATG3Q9NT62 314 aa8.75□□□□□ -1.01
CCDC196-201ENST00000359454 CCDC87Q9NVE4 849 aa8.75□□□□□ -1.01
CCDC196-201ENST00000359454 BCS1LQ9Y276 419 aa8.75□□□□□ -1.01
CCDC196-201ENST00000359454 RTCBQ9Y3I0 505 aaKnown RBP8.75□□□□□ -1.01
CCDC196-201ENST00000359454 PLEKHG2Q9H7P9 1386 aa8.74□□□□□ -1.01
CCDC196-201ENST00000359454 C10orf71Q711Q0 1435 aa8.74□□□□□ -1.01
CCDC196-201ENST00000359454 A0A0G2JLW4 131 aa8.74□□□□□ -1.01
CCDC196-201ENST00000359454 FAM205CA6NFA0 338 aa8.74□□□□□ -1.01
CCDC196-201ENST00000359454 RC3H1Q5TC82 1133 aaKnown RBP8.74□□□□□ -1.01
CCDC196-201ENST00000359454 DNAJC5GQ8N7S2 189 aa8.74□□□□□ -1.01
CCDC196-201ENST00000359454 KIF13BQ9NQT8 1826 aa8.74□□□□□ -1.01
CCDC196-201ENST00000359454 KDRP35968 1356 aa8.73□□□□□ -1.01
CCDC196-201ENST00000359454 ERVV-2B6SEH9 535 aa8.73□□□□□ -1.01
CCDC196-201ENST00000359454 EIF5BO60841 1220 aaKnown RBP8.73□□□□□ -1.01
CCDC196-201ENST00000359454 DPEP1P16444 411 aa8.73□□□□□ -1.01
CCDC196-201ENST00000359454 FECHP22830 423 aa8.73□□□□□ -1.01
CCDC196-201ENST00000359454 MAP2K5Q13163 448 aa8.73□□□□□ -1.01
CCDC196-201ENST00000359454 PARP3Q9Y6F1 533 aa8.73□□□□□ -1.01
CCDC196-201ENST00000359454 KIAA1551Q9HCM1 1747 aa8.73□□□□□ -1.01
CCDC196-201ENST00000359454 ANKRD26Q9UPS8 1709 aa8.73□□□□□ -1.01
CCDC196-201ENST00000359454 PPP1R3GB7ZBB8 358 aa8.72□□□□□ -1.01
CCDC196-201ENST00000359454 RPS6KA4O75676 772 aa8.72□□□□□ -1.01
CCDC196-201ENST00000359454 HSP90AB1P08238 724 aaKnown RBP8.72□□□□□ -1.01
CCDC196-201ENST00000359454 GYS1P13807 737 aa8.72□□□□□ -1.01
CCDC196-201ENST00000359454 RFC4P35249 363 aa8.72□□□□□ -1.01
CCDC196-201ENST00000359454 TRIM26Q12899 539 aaPredicted RBP8.72□□□□□ -1.01
CCDC196-201ENST00000359454 LCE2DQ5TA82 110 aaPredicted RBP8.72□□□□□ -1.01
CCDC196-201ENST00000359454 C16orf71Q8IYS4 520 aaPredicted RBP8.72□□□□□ -1.01
CCDC196-201ENST00000359454 RBM46Q8TBY0 533 aaKnown RBP8.72□□□□□ -1.01
CCDC196-201ENST00000359454 KCNK17Q96T54 332 aa8.72□□□□□ -1.01
CCDC196-201ENST00000359454 NMRK2Q9NPI5 230 aa8.72□□□□□ -1.01
CCDC196-201ENST00000359454 POLKQ9UBT6 870 aa8.72□□□□□ -1.01
CCDC196-201ENST00000359454 CNTNAP4Q9C0A0 1308 aa8.72□□□□□ -1.01
CCDC196-201ENST00000359454 ZNF831Q5JPB2 1677 aa8.72□□□□□ -1.01
CCDC196-201ENST00000359454 C4AP0C0L4 1744 aa8.71□□□□□ -1.01
CCDC196-201ENST00000359454 N4BP2Q86UW6 1770 aaPredicted RBP8.71□□□□□ -1.01
CCDC196-201ENST00000359454 COL9A1P20849 921 aa8.71□□□□□ -1.02
CCDC196-201ENST00000359454 FSTL1Q12841 308 aa8.71□□□□□ -1.02
CCDC196-201ENST00000359454 EIF4A2Q14240 407 aaKnown RBP8.71□□□□□ -1.02
CCDC196-201ENST00000359454 C9orf131Q5VYM1 1079 aa8.71□□□□□ -1.02
CCDC196-201ENST00000359454 DCAF5Q96JK2 942 aa8.71□□□□□ -1.02
CCDC196-201ENST00000359454 SLC4A9Q96Q91 983 aa8.71□□□□□ -1.02
CCDC196-201ENST00000359454 PLEKHO1Q53GL0 409 aaPredicted RBP8.7□□□□□ -1.02
CCDC196-201ENST00000359454 PADI6Q6TGC4 694 aa8.7□□□□□ -1.02
CCDC196-201ENST00000359454 HS3ST6Q96QI5 342 aa8.7□□□□□ -1.02
CCDC196-201ENST00000359454 PIM2Q9P1W9 311 aa8.7□□□□□ -1.02
CCDC196-201ENST00000359454 KDM2BQ8NHM5 1336 aa8.7□□□□□ -1.02
CCDC196-201ENST00000359454 IRF6O14896 467 aa8.69□□□□□ -1.02
CCDC196-201ENST00000359454 KCNA3P22001 575 aa8.69□□□□□ -1.02
CCDC196-201ENST00000359454 PRSS12P56730 875 aa8.69□□□□□ -1.02
CCDC196-201ENST00000359454 CABP4P57796 275 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms