RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 TTLL7Q6ZT98 887 aa22.14■■□□□ 1.14
FAM3D-201ENST00000358781 LRP10Q7Z4F1 713 aa22.14■■□□□ 1.14
FAM3D-201ENST00000358781 NECTIN2Q92692 538 aa22.14■■□□□ 1.14
FAM3D-201ENST00000358781 WWC3Q9ULE0 1092 aa22.14■■□□□ 1.14
FAM3D-201ENST00000358781 ERVV-1B6SEH8 477 aa22.13■■□□□ 1.13
FAM3D-201ENST00000358781 HLFQ16534 295 aa22.13■■□□□ 1.13
FAM3D-201ENST00000358781 PROSER3Q2NL68 480 aa22.13■■□□□ 1.13
FAM3D-201ENST00000358781 KIF6Q6ZMV9 814 aa22.13■■□□□ 1.13
FAM3D-201ENST00000358781 MAP3K15Q6ZN16 1313 aa22.13■■□□□ 1.13
FAM3D-201ENST00000358781 BRCA1P38398 1863 aaKnown RBP22.13■■□□□ 1.13
FAM3D-201ENST00000358781 KCNA3P22001 575 aa22.12■■□□□ 1.13
FAM3D-201ENST00000358781 DUSP27Q5VZP5 1158 aa22.12■■□□□ 1.13
FAM3D-201ENST00000358781 NUP98P52948 1817 aa22.12■■□□□ 1.13
FAM3D-201ENST00000358781 ANXA1P04083 346 aa22.11■■□□□ 1.13
FAM3D-201ENST00000358781 YY1P25490 414 aa22.11■■□□□ 1.13
FAM3D-201ENST00000358781 HDGFL1Q5TGJ6 251 aa22.11■■□□□ 1.13
FAM3D-201ENST00000358781 PRR5LQ6MZQ0 368 aa22.1■■□□□ 1.13
FAM3D-201ENST00000358781 DDX21Q9NR30 783 aaKnown RBP eCLIP22.1■■□□□ 1.13
FAM3D-201ENST00000358781 NIP7Q9Y221 180 aaKnown RBP eCLIP22.1■■□□□ 1.13
FAM3D-201ENST00000358781 IL16Q14005 1332 aa22.1■■□□□ 1.13
FAM3D-201ENST00000358781 CHRNA5P30532 468 aa22.09■■□□□ 1.13
FAM3D-201ENST00000358781 CNBD1Q8NA66 436 aa22.09■■□□□ 1.13
FAM3D-201ENST00000358781 ZBTB3Q9H5J0 574 aa22.09■■□□□ 1.13
FAM3D-201ENST00000358781 SALL2Q9Y467 1007 aaPredicted RBP22.09■■□□□ 1.13
FAM3D-201ENST00000358781 ANKRD31Q8N7Z5 1873 aa22.09■■□□□ 1.13
FAM3D-201ENST00000358781 PIM2Q9P1W9 311 aa22.08■■□□□ 1.13
FAM3D-201ENST00000358781 CHPF2Q9P2E5 772 aa22.08■■□□□ 1.13
FAM3D-201ENST00000358781 ATP10DQ9P241 1426 aa22.08■■□□□ 1.12
FAM3D-201ENST00000358781 NBPF5PQ86XG9 351 aaPredicted RBP22.07■■□□□ 1.12
FAM3D-201ENST00000358781 C8orf58Q8NAV2 365 aa22.07■■□□□ 1.12
FAM3D-201ENST00000358781 TSR2Q969E8 191 aaKnown RBP22.07■■□□□ 1.12
FAM3D-201ENST00000358781 BRIP1Q9BX63 1249 aa22.07■■□□□ 1.12
FAM3D-201ENST00000358781 BCS1LQ9Y276 419 aa22.07■■□□□ 1.12
FAM3D-201ENST00000358781 CCER2I3L3R5 266 aa22.06■■□□□ 1.12
FAM3D-201ENST00000358781 ELL2O00472 640 aaPredicted RBP22.06■■□□□ 1.12
FAM3D-201ENST00000358781 NPHP1O15259 732 aa22.06■■□□□ 1.12
FAM3D-201ENST00000358781 COPS6Q7L5N1 327 aa22.06■■□□□ 1.12
FAM3D-201ENST00000358781 WDR63Q8IWG1 891 aa22.06■■□□□ 1.12
FAM3D-201ENST00000358781 CCDC24Q8N4L8 307 aa22.06■■□□□ 1.12
FAM3D-201ENST00000358781 XAGE3Q8WTP9 111 aa22.06■■□□□ 1.12
FAM3D-201ENST00000358781 DBF4Q9UBU7 674 aaPredicted RBP22.06■■□□□ 1.12
FAM3D-201ENST00000358781 DLEC1Q9Y238 1755 aa22.06■■□□□ 1.12
FAM3D-201ENST00000358781 ST5P78524 1137 aa22.06■■□□□ 1.12
FAM3D-201ENST00000358781 GIGYF2Q6Y7W6 1299 aaKnown RBP22.06■■□□□ 1.12
FAM3D-201ENST00000358781 ARFGEF1Q9Y6D6 1849 aa22.05■■□□□ 1.12
FAM3D-201ENST00000358781 PDE6BP35913 854 aa22.05■■□□□ 1.12
FAM3D-201ENST00000358781 AIMP1Q12904 312 aaKnown RBP22.05■■□□□ 1.12
FAM3D-201ENST00000358781 DALRD3Q5D0E6 543 aaKnown RBP22.05■■□□□ 1.12
FAM3D-201ENST00000358781 C2CD5Q86YS7 1000 aa22.05■■□□□ 1.12
FAM3D-201ENST00000358781 H0YIN7 160 aa22.04■■□□□ 1.12
FAM3D-201ENST00000358781 TPTE2Q6XPS3 522 aa22.04■■□□□ 1.12
FAM3D-201ENST00000358781 PDZRN3Q9UPQ7 1066 aa22.04■■□□□ 1.12
FAM3D-201ENST00000358781 FAM177BA6PVY3 158 aa22.03■■□□□ 1.12
FAM3D-201ENST00000358781 ZNF34Q8IZ26 560 aa22.03■■□□□ 1.12
FAM3D-201ENST00000358781 TSPYL6Q8N831 410 aa22.03■■□□□ 1.12
FAM3D-201ENST00000358781 HYPKQ9NX55 129 aa22.03■■□□□ 1.12
FAM3D-201ENST00000358781 COL11A2P13942 1736 aaPredicted RBP22.02■■□□□ 1.12
FAM3D-201ENST00000358781 UBN2Q6ZU65 1347 aa22.02■■□□□ 1.12
FAM3D-201ENST00000358781 GPTP24298 496 aa22.02■■□□□ 1.12
FAM3D-201ENST00000358781 CHMP4AQ9BY43 222 aa22.02■■□□□ 1.12
FAM3D-201ENST00000358781 DIEXFQ68CQ4 756 aaKnown RBP22.01■■□□□ 1.11
FAM3D-201ENST00000358781 NYXQ9GZU5 481 aa22.01■■□□□ 1.11
FAM3D-201ENST00000358781 IBTKQ9P2D0 1353 aaPredicted RBP22■■□□□ 1.11
FAM3D-201ENST00000358781 ANKRD36CQ5JPF3 1778 aa22■■□□□ 1.11
FAM3D-201ENST00000358781 FANCIQ9NVI1 1328 aa22■■□□□ 1.11
FAM3D-201ENST00000358781 PARP10Q53GL7 1025 aa21.99■■□□□ 1.11
FAM3D-201ENST00000358781 HSP90AB3PQ58FF7 597 aa21.99■■□□□ 1.11
FAM3D-201ENST00000358781 CCDC30Q5VVM6 783 aa21.99■■□□□ 1.11
FAM3D-201ENST00000358781 SUSD4Q5VX71 490 aa21.99■■□□□ 1.11
FAM3D-201ENST00000358781 TTLL6Q8N841 843 aa21.99■■□□□ 1.11
FAM3D-201ENST00000358781 PLBD2Q8NHP8 589 aa21.99■■□□□ 1.11
FAM3D-201ENST00000358781 GTF2E1P29083 439 aaPredicted RBP21.98■■□□□ 1.11
FAM3D-201ENST00000358781 ARHGAP27Q6ZUM4 889 aa21.98■■□□□ 1.11
FAM3D-201ENST00000358781 KLRG2A4D1S0 409 aaPredicted RBP21.97■■□□□ 1.11
FAM3D-201ENST00000358781 SRGNP10124 158 aa21.97■■□□□ 1.11
FAM3D-201ENST00000358781 TCIRG1Q13488 830 aa21.97■■□□□ 1.11
FAM3D-201ENST00000358781 TWISTNBQ3B726 338 aaPredicted RBP21.97■■□□□ 1.11
FAM3D-201ENST00000358781 ANKRD13DQ6ZTN6 518 aa21.97■■□□□ 1.11
FAM3D-201ENST00000358781 NUTM1Q86Y26 1132 aa21.97■■□□□ 1.11
FAM3D-201ENST00000358781 ZNF622Q969S3 477 aaKnown RBP eCLIP21.97■■□□□ 1.11
FAM3D-201ENST00000358781 SPINK5Q9NQ38 1064 aaPredicted RBP21.97■■□□□ 1.11
FAM3D-201ENST00000358781 ZNF521Q96K83 1311 aa21.96■■□□□ 1.11
FAM3D-201ENST00000358781 ABCC12Q96J65 1359 aa21.96■■□□□ 1.11
FAM3D-201ENST00000358781 NTSR2O95665 410 aa21.96■■□□□ 1.11
FAM3D-201ENST00000358781 STYK1Q6J9G0 422 aa21.96■■□□□ 1.11
FAM3D-201ENST00000358781 PPP1R42Q7Z4L9 355 aa21.96■■□□□ 1.11
FAM3D-201ENST00000358781 GOLGA2Q08379 1002 aa21.95■■□□□ 1.1
FAM3D-201ENST00000358781 ERFEQ4G0M1 354 aa21.95■■□□□ 1.1
FAM3D-201ENST00000358781 MASTLQ96GX5 879 aa21.95■■□□□ 1.1
FAM3D-201ENST00000358781 MYH16Q9H6N6 1097 aa21.95■■□□□ 1.1
FAM3D-201ENST00000358781 PHAXQ9H814 394 aaKnown RBP21.95■■□□□ 1.1
FAM3D-201ENST00000358781 NLRP10Q86W26 655 aa21.94■■□□□ 1.1
FAM3D-201ENST00000358781 UTP14AQ9BVJ6 771 aaKnown RBP21.94■■□□□ 1.1
FAM3D-201ENST00000358781 ARFGEF2Q9Y6D5 1785 aa21.94■■□□□ 1.1
FAM3D-201ENST00000358781 RIC1Q4ADV7 1423 aa21.94■■□□□ 1.1
FAM3D-201ENST00000358781 TNRC6CQ9HCJ0 1690 aaKnown RBP21.94■■□□□ 1.1
FAM3D-201ENST00000358781 EXOSC9Q06265 439 aaKnown RBP21.93■■□□□ 1.1
FAM3D-201ENST00000358781 MIER1Q8N108 512 aa21.93■■□□□ 1.1
FAM3D-201ENST00000358781 ZNF784Q8NCA9 323 aaPredicted RBP21.93■■□□□ 1.1
FAM3D-201ENST00000358781 CNKSR1Q969H4 720 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms