RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 RUFY2Q8WXA3 655 aa28.3■■■□□ 2.12
NPAS3-203ENST00000357798 GTPBP4Q9BZE4 634 aaKnown RBP28.3■■■□□ 2.12
NPAS3-203ENST00000357798 SOX12O15370 315 aa28.3■■■□□ 2.12
NPAS3-203ENST00000357798 PDIA4P13667 645 aaKnown RBP28.3■■■□□ 2.12
NPAS3-203ENST00000357798 CWC27Q6UX04 472 aaKnown RBP28.3■■■□□ 2.12
NPAS3-203ENST00000357798 ANKRD7Q92527 254 aa28.3■■■□□ 2.12
NPAS3-203ENST00000357798 PDRG1Q9NUG6 133 aa28.3■■■□□ 2.12
NPAS3-203ENST00000357798 RIOK3O14730 519 aaKnown RBP28.29■■■□□ 2.12
NPAS3-203ENST00000357798 HSP90AB4PQ58FF6 505 aa28.29■■■□□ 2.12
NPAS3-203ENST00000357798 FAM200AQ8TCP9 573 aa28.29■■■□□ 2.12
NPAS3-203ENST00000357798 PDCL2Q8N4E4 241 aa28.28■■■□□ 2.12
NPAS3-203ENST00000357798 ZSWIM6Q9HCJ5 1215 aa28.28■■■□□ 2.12
NPAS3-203ENST00000357798 SPG7Q9UQ90 795 aa28.28■■■□□ 2.12
NPAS3-203ENST00000357798 CTIFO43310 598 aaKnown RBP28.28■■■□□ 2.12
NPAS3-203ENST00000357798 GLRX3O76003 335 aaKnown RBP28.28■■■□□ 2.12
NPAS3-203ENST00000357798 SRGAP3O43295 1099 aa28.28■■■□□ 2.12
NPAS3-203ENST00000357798 PTPRUQ92729 1446 aa28.27■■■□□ 2.12
NPAS3-203ENST00000357798 CPA1P15085 419 aa28.27■■■□□ 2.12
NPAS3-203ENST00000357798 CYP46A1Q9Y6A2 500 aa28.27■■■□□ 2.12
NPAS3-203ENST00000357798 CBX1P83916 185 aa28.27■■■□□ 2.12
NPAS3-203ENST00000357798 ATP2B3Q16720 1220 aa28.27■■■□□ 2.12
NPAS3-203ENST00000357798 JAKMIP1Q96N16 626 aaKnown RBP28.27■■■□□ 2.12
NPAS3-203ENST00000357798 ELP1O95163 1332 aa28.26■■■□□ 2.12
NPAS3-203ENST00000357798 FAM177BA6PVY3 158 aa28.26■■■□□ 2.11
NPAS3-203ENST00000357798 TAF7Q15545 349 aaPredicted RBP28.26■■■□□ 2.11
NPAS3-203ENST00000357798 SPC24Q8NBT2 197 aa28.26■■■□□ 2.11
NPAS3-203ENST00000357798 CCDC171Q6TFL3 1326 aa28.26■■■□□ 2.11
NPAS3-203ENST00000357798 MAP3K11Q16584 847 aa28.25■■■□□ 2.11
NPAS3-203ENST00000357798 HDGFL1Q5TGJ6 251 aa28.25■■■□□ 2.11
NPAS3-203ENST00000357798 AMPHP49418 695 aa28.25■■■□□ 2.11
NPAS3-203ENST00000357798 VPS37CA5D8V6 355 aaPredicted RBP28.24■■■□□ 2.11
NPAS3-203ENST00000357798 ST3GAL1Q11201 340 aa28.24■■■□□ 2.11
NPAS3-203ENST00000357798 KRT85P78386 507 aa28.24■■■□□ 2.11
NPAS3-203ENST00000357798 NUP62CLQ9H1M0 184 aa28.24■■■□□ 2.11
NPAS3-203ENST00000357798 PTH1RQ03431 593 aa28.23■■■□□ 2.11
NPAS3-203ENST00000357798 ADCK5Q3MIX3 580 aa28.23■■■□□ 2.11
NPAS3-203ENST00000357798 IL17REQ8NFR9 667 aa28.23■■■□□ 2.11
NPAS3-203ENST00000357798 PHAXQ9H814 394 aaKnown RBP28.23■■■□□ 2.11
NPAS3-203ENST00000357798 MRVI1Q9Y6F6 885 aa28.22■■■□□ 2.11
NPAS3-203ENST00000357798 ADAMTS13Q76LX8 1427 aa28.22■■■□□ 2.11
NPAS3-203ENST00000357798 TYRO3Q06418 890 aa28.22■■■□□ 2.11
NPAS3-203ENST00000357798 PRPF40BQ6NWY9 871 aaKnown RBP28.22■■■□□ 2.11
NPAS3-203ENST00000357798 TTC6Q86TZ1 520 aa28.22■■■□□ 2.11
NPAS3-203ENST00000357798 ZHX1Q9UKY1 873 aaPredicted RBP28.22■■■□□ 2.11
NPAS3-203ENST00000357798 NWD1Q149M9 1564 aa28.21■■■□□ 2.11
NPAS3-203ENST00000357798 ME3Q16798 604 aa28.21■■■□□ 2.11
NPAS3-203ENST00000357798 PTGS1P23219 599 aa28.2■■■□□ 2.11
NPAS3-203ENST00000357798 SYCP1Q15431 976 aa28.2■■■□□ 2.11
NPAS3-203ENST00000357798 NUTM2FA1L443 756 aa28.2■■■□□ 2.1
NPAS3-203ENST00000357798 ADGRL3Q9HAR2 1447 aa28.19■■■□□ 2.1
NPAS3-203ENST00000357798 NECTIN1Q15223 517 aa28.19■■■□□ 2.1
NPAS3-203ENST00000357798 PDCP20941 246 aa28.19■■■□□ 2.1
NPAS3-203ENST00000357798 PIK3C2AO00443 1686 aa28.19■■■□□ 2.1
NPAS3-203ENST00000357798 NBPF7P0C2Y1 421 aaPredicted RBP28.18■■■□□ 2.1
NPAS3-203ENST00000357798 LARP1BQ659C4 914 aaKnown RBP28.18■■■□□ 2.1
NPAS3-203ENST00000357798 ZKSCAN1P17029 563 aaPredicted RBP28.18■■■□□ 2.1
NPAS3-203ENST00000357798 TMEM2Q9UHN6 1383 aa28.17■■■□□ 2.1
NPAS3-203ENST00000357798 LIG1P18858 919 aa28.17■■■□□ 2.1
NPAS3-203ENST00000357798 BEND3Q5T5X7 828 aa28.17■■■□□ 2.1
NPAS3-203ENST00000357798 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.17■■■□□ 2.1
NPAS3-203ENST00000357798 UBR1Q8IWV7 1749 aa28.17■■■□□ 2.1
NPAS3-203ENST00000357798 KIF20AO95235 890 aa28.17■■■□□ 2.1
NPAS3-203ENST00000357798 ECHDC1Q9NTX5 307 aa28.17■■■□□ 2.1
NPAS3-203ENST00000357798 CLASRPQ8N2M8 674 aaKnown RBP28.16■■■□□ 2.1
NPAS3-203ENST00000357798 GPATCH3Q96I76 525 aa28.16■■■□□ 2.1
NPAS3-203ENST00000357798 DIP2BQ9P265 1576 aa28.16■■■□□ 2.1
NPAS3-203ENST00000357798 MTX1Q13505 466 aa28.16■■■□□ 2.1
NPAS3-203ENST00000357798 RBM43Q6ZSC3 357 aaKnown RBP28.16■■■□□ 2.1
NPAS3-203ENST00000357798 FEZ1Q99689 392 aa28.16■■■□□ 2.1
NPAS3-203ENST00000357798 DDX19AQ9NUU7 478 aaKnown RBP28.16■■■□□ 2.1
NPAS3-203ENST00000357798 NECAB1Q8N987 351 aa28.16■■■□□ 2.1
NPAS3-203ENST00000357798 DNAAF4Q8WXU2 420 aa28.16■■■□□ 2.1
NPAS3-203ENST00000357798 OS9Q13438 667 aaPredicted RBP28.15■■■□□ 2.1
NPAS3-203ENST00000357798 LUZP1Q86V48 1076 aa28.15■■■□□ 2.1
NPAS3-203ENST00000357798 SCAND2PQ9GZW5 306 aaPredicted RBP28.15■■■□□ 2.1
NPAS3-203ENST00000357798 TNMDQ9H2S6 317 aa28.15■■■□□ 2.1
NPAS3-203ENST00000357798 TPCN1Q9ULQ1 816 aa28.15■■■□□ 2.1
NPAS3-203ENST00000357798 SMTNL1A8MU46 457 aa28.15■■■□□ 2.1
NPAS3-203ENST00000357798 CDC37L1Q7L3B6 337 aa28.15■■■□□ 2.1
NPAS3-203ENST00000357798 EVI5LQ96CN4 794 aa28.15■■■□□ 2.1
NPAS3-203ENST00000357798 CBX8Q9HC52 389 aa28.15■■■□□ 2.1
NPAS3-203ENST00000357798 CCDC186Q7Z3E2 898 aa28.14■■■□□ 2.1
NPAS3-203ENST00000357798 CHMP4AQ9BY43 222 aa28.14■■■□□ 2.1
NPAS3-203ENST00000357798 HOXB7P09629 217 aa28.14■■■□□ 2.09
NPAS3-203ENST00000357798 CREB3L3Q68CJ9 461 aa28.14■■■□□ 2.09
NPAS3-203ENST00000357798 PLA2G4DQ86XP0 818 aa28.14■■■□□ 2.09
NPAS3-203ENST00000357798 RBM8AQ9Y5S9 174 aaKnown RBP28.14■■■□□ 2.09
NPAS3-203ENST00000357798 PSMA5P28066 241 aa28.13■■■□□ 2.09
NPAS3-203ENST00000357798 MLECQ14165 292 aa28.13■■■□□ 2.09
NPAS3-203ENST00000357798 TDRD7Q8NHU6 1098 aaKnown RBP28.13■■■□□ 2.09
NPAS3-203ENST00000357798 NPHP3Q7Z494 1330 aa28.13■■■□□ 2.09
NPAS3-203ENST00000357798 ZNF75DP51815 510 aa28.13■■■□□ 2.09
NPAS3-203ENST00000357798 ANO6Q4KMQ2 910 aa28.13■■■□□ 2.09
NPAS3-203ENST00000357798 MED1Q15648 1581 aaPredicted RBP28.12■■■□□ 2.09
NPAS3-203ENST00000357798 HIP1O00291 1037 aa28.12■■■□□ 2.09
NPAS3-203ENST00000357798 U2AF2P26368 475 aaKnown RBP eCLIP28.12■■■□□ 2.09
NPAS3-203ENST00000357798 CAMK4Q16566 473 aa28.12■■■□□ 2.09
NPAS3-203ENST00000357798 CLSTN2Q9H4D0 955 aa28.12■■■□□ 2.09
NPAS3-203ENST00000357798 KDM3BQ7LBC6 1761 aa28.12■■■□□ 2.09
NPAS3-203ENST00000357798 NCBP1Q09161 790 aaKnown RBP28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms