RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 UBAC1Q9BSL1 405 aa9.21□□□□□ -0.93
SCN8A-201ENST00000354534 SMIM24O75264 130 aa9.21□□□□□ -0.94
SCN8A-201ENST00000354534 RASSF4Q9H2L5 321 aa9.21□□□□□ -0.94
SCN8A-201ENST00000354534 KIF6Q6ZMV9 814 aa9.21□□□□□ -0.94
SCN8A-201ENST00000354534 SH2D4BQ5SQS7 431 aa9.21□□□□□ -0.94
SCN8A-201ENST00000354534 TMC6Q7Z403 805 aa9.21□□□□□ -0.94
SCN8A-201ENST00000354534 KCNK9Q9NPC2 374 aa9.21□□□□□ -0.94
SCN8A-201ENST00000354534 WASHC2CQ9Y4E1 1318 aa9.21□□□□□ -0.94
SCN8A-201ENST00000354534 IFI16Q16666 785 aaKnown RBP9.21□□□□□ -0.94
SCN8A-201ENST00000354534 SCAPERQ9BY12 1400 aa9.21□□□□□ -0.94
SCN8A-201ENST00000354534 RUNDC1Q96C34 613 aa9.2□□□□□ -0.94
SCN8A-201ENST00000354534 VPS41P49754 854 aa9.2□□□□□ -0.94
SCN8A-201ENST00000354534 SELENOOQ9BVL4 669 aa9.2□□□□□ -0.94
SCN8A-201ENST00000354534 TXNDC16Q9P2K2 825 aa9.2□□□□□ -0.94
SCN8A-201ENST00000354534 DBN1Q16643 649 aa9.2□□□□□ -0.94
SCN8A-201ENST00000354534 BAG1Q99933 345 aaPredicted RBP9.2□□□□□ -0.94
SCN8A-201ENST00000354534 PAXBP1Q9Y5B6 917 aa9.2□□□□□ -0.94
SCN8A-201ENST00000354534 KRT13P13646 458 aa9.2□□□□□ -0.94
SCN8A-201ENST00000354534 RASAL2Q9UJF2 1139 aa9.2□□□□□ -0.94
SCN8A-201ENST00000354534 PRDM2Q13029 1718 aa9.2□□□□□ -0.94
SCN8A-201ENST00000354534 GKAP1Q5VSY0 366 aaPredicted RBP9.2□□□□□ -0.94
SCN8A-201ENST00000354534 FRMD4BQ9Y2L6 1034 aa9.2□□□□□ -0.94
SCN8A-201ENST00000354534 GNL3LQ9NVN8 582 aaKnown RBP9.2□□□□□ -0.94
SCN8A-201ENST00000354534 CCDC183Q5T5S1 534 aa9.2□□□□□ -0.94
SCN8A-201ENST00000354534 TRMT1LQ7Z2T5 733 aaKnown RBP9.2□□□□□ -0.94
SCN8A-201ENST00000354534 CNTLNQ9NXG0 1405 aa9.2□□□□□ -0.94
SCN8A-201ENST00000354534 SIL1Q9H173 461 aa9.2□□□□□ -0.94
SCN8A-201ENST00000354534 KRBA2Q6ZNG9 492 aa9.2□□□□□ -0.94
SCN8A-201ENST00000354534 INTS8Q75QN2 995 aaKnown RBP9.2□□□□□ -0.94
SCN8A-201ENST00000354534 CCT6BQ92526 530 aa9.2□□□□□ -0.94
SCN8A-201ENST00000354534 CRCPO75575 148 aa9.19□□□□□ -0.94
SCN8A-201ENST00000354534 LRCH2Q5VUJ6 765 aa9.19□□□□□ -0.94
SCN8A-201ENST00000354534 ARHGEF2Q92974 986 aaKnown RBP9.19□□□□□ -0.94
SCN8A-201ENST00000354534 MMRN2Q9H8L6 949 aa9.19□□□□□ -0.94
SCN8A-201ENST00000354534 ABCC8Q09428 1581 aa9.19□□□□□ -0.94
SCN8A-201ENST00000354534 MTIF2P46199 727 aaKnown RBP9.19□□□□□ -0.94
SCN8A-201ENST00000354534 MINK1Q8N4C8 1332 aaPredicted RBP9.19□□□□□ -0.94
SCN8A-201ENST00000354534 AEBP2Q6ZN18 517 aaPredicted RBP9.19□□□□□ -0.94
SCN8A-201ENST00000354534 SAMD15Q9P1V8 674 aa9.19□□□□□ -0.94
SCN8A-201ENST00000354534 COG7P83436 770 aa9.19□□□□□ -0.94
SCN8A-201ENST00000354534 CETN1Q12798 172 aa9.19□□□□□ -0.94
SCN8A-201ENST00000354534 TCERG1LQ5VWI1 586 aa9.19□□□□□ -0.94
SCN8A-201ENST00000354534 SYNCQ9H7C4 482 aa9.19□□□□□ -0.94
SCN8A-201ENST00000354534 BLOC1S2Q6QNY1 142 aa9.19□□□□□ -0.94
SCN8A-201ENST00000354534 FKBP4Q02790 459 aaKnown RBP eCLIP9.19□□□□□ -0.94
SCN8A-201ENST00000354534 C1orf115Q9H7X2 142 aa9.19□□□□□ -0.94
SCN8A-201ENST00000354534 PDRG1Q9NUG6 133 aa9.19□□□□□ -0.94
SCN8A-201ENST00000354534 ANKFY1Q9P2R3 1169 aa9.19□□□□□ -0.94
SCN8A-201ENST00000354534 SDCCAG8Q86SQ7 713 aaPredicted RBP9.19□□□□□ -0.94
SCN8A-201ENST00000354534 SEC63Q9UGP8 760 aaKnown RBP9.19□□□□□ -0.94
SCN8A-201ENST00000354534 ST20-MTHFSA0A0A6YYL1 179 aa9.18□□□□□ -0.94
SCN8A-201ENST00000354534 WASF1Q92558 559 aa9.18□□□□□ -0.94
SCN8A-201ENST00000354534 RRBP1Q9P2E9 1410 aaKnown RBP9.18□□□□□ -0.94
SCN8A-201ENST00000354534 GSDMDP57764 484 aa9.18□□□□□ -0.94
SCN8A-201ENST00000354534 PLVAPQ9BX97 442 aa9.18□□□□□ -0.94
SCN8A-201ENST00000354534 SOGA1O94964 1423 aa9.18□□□□□ -0.94
SCN8A-201ENST00000354534 VCXQ9H320 206 aa9.18□□□□□ -0.94
SCN8A-201ENST00000354534 WHAMMP3Q1A5X7 153 aa9.18□□□□□ -0.94
SCN8A-201ENST00000354534 ZNF365Q70YC5 407 aa9.18□□□□□ -0.94
SCN8A-201ENST00000354534 GNG11P61952 73 aa9.18□□□□□ -0.94
SCN8A-201ENST00000354534 ZRANB2O95218 330 aaKnown RBP eCLIP9.18□□□□□ -0.94
SCN8A-201ENST00000354534 ISM2Q6H9L7 571 aa9.18□□□□□ -0.94
SCN8A-201ENST00000354534 MTUS1Q9ULD2 1270 aa9.18□□□□□ -0.94
SCN8A-201ENST00000354534 CIZ1Q9ULV3 898 aaPredicted RBP9.18□□□□□ -0.94
SCN8A-201ENST00000354534 MCM4P33991 863 aa9.18□□□□□ -0.94
SCN8A-201ENST00000354534 SPECC1L-ADORA2AF8WAN1 911 aa9.18□□□□□ -0.94
SCN8A-201ENST00000354534 SYF2O95926 243 aaKnown RBP9.18□□□□□ -0.94
SCN8A-201ENST00000354534 TRIM35Q9UPQ4 493 aa9.18□□□□□ -0.94
SCN8A-201ENST00000354534 CALCOCO2Q13137 446 aa9.18□□□□□ -0.94
SCN8A-201ENST00000354534 CCDC14Q49A88 953 aa9.18□□□□□ -0.94
SCN8A-201ENST00000354534 CCDC89Q8N998 374 aa9.18□□□□□ -0.94
SCN8A-201ENST00000354534 CCDC171Q6TFL3 1326 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 HSPA1LP34931 641 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 IFT74Q96LB3 600 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 CCDC77Q9BR77 488 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 PPME1Q9Y570 386 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 TMEM110-MUSTN1A8MSY1 372 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 GNAI3P08754 354 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 JAKMIP1Q96N16 626 aaKnown RBP9.17□□□□□ -0.94
SCN8A-201ENST00000354534 SYCP3Q8IZU3 236 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 CNNM3Q8NE01 707 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 RBM42Q9BTD8 480 aaKnown RBP9.17□□□□□ -0.94
SCN8A-201ENST00000354534 TPX2Q9ULW0 747 aaKnown RBP9.17□□□□□ -0.94
SCN8A-201ENST00000354534 BRD4O60885 1362 aaPredicted RBP9.17□□□□□ -0.94
SCN8A-201ENST00000354534 MX2P20592 715 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 ERCC6LQ2NKX8 1250 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 LRSAM1Q6UWE0 723 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 MRPL46Q9H2W6 279 aaKnown RBP9.17□□□□□ -0.94
SCN8A-201ENST00000354534 MAFGO15525 162 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 PFDN1O60925 122 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 RAB3IPQ96QF0 476 aaPredicted RBP9.17□□□□□ -0.94
SCN8A-201ENST00000354534 ADCY5O95622 1261 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 POLD1P28340 1107 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 ALDH3A1P30838 453 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 NBPF11Q86T75 865 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 CCDC65Q8IXS2 484 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 TTC12Q9H892 705 aaPredicted RBP9.17□□□□□ -0.94
SCN8A-201ENST00000354534 CCDC25Q86WR0 208 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 TBC1D5Q92609 795 aa9.17□□□□□ -0.94
SCN8A-201ENST00000354534 ZC3H6P61129 1189 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms