RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 DUSP27Q5VZP5 1158 aa24.44■■□□□ 1.5
VPS72-201ENST00000354473 TTLL7Q6ZT98 887 aa24.44■■□□□ 1.5
VPS72-201ENST00000354473 BRCA1P38398 1863 aaKnown RBP24.43■■□□□ 1.5
VPS72-201ENST00000354473 RGL2O15211 777 aa24.43■■□□□ 1.5
VPS72-201ENST00000354473 ANXA1P04083 346 aa24.43■■□□□ 1.5
VPS72-201ENST00000354473 HDGFL1Q5TGJ6 251 aa24.43■■□□□ 1.5
VPS72-201ENST00000354473 NUP98P52948 1817 aa24.43■■□□□ 1.5
VPS72-201ENST00000354473 MAP3K15Q6ZN16 1313 aa24.43■■□□□ 1.5
VPS72-201ENST00000354473 HLFQ16534 295 aa24.42■■□□□ 1.5
VPS72-201ENST00000354473 LRP10Q7Z4F1 713 aa24.42■■□□□ 1.5
VPS72-201ENST00000354473 CHD4Q14839 1912 aa24.42■■□□□ 1.5
VPS72-201ENST00000354473 ZBTB3Q9H5J0 574 aa24.41■■□□□ 1.5
VPS72-201ENST00000354473 ERVV-1B6SEH8 477 aa24.4■■□□□ 1.5
VPS72-201ENST00000354473 GRIN3BO60391 1043 aa24.4■■□□□ 1.5
VPS72-201ENST00000354473 TSR2Q969E8 191 aaKnown RBP24.4■■□□□ 1.5
VPS72-201ENST00000354473 ANKRD31Q8N7Z5 1873 aa24.4■■□□□ 1.5
VPS72-201ENST00000354473 IL16Q14005 1332 aa24.4■■□□□ 1.5
VPS72-201ENST00000354473 GOLGB1Q14789 3259 aaKnown RBP24.4■■□□□ 1.5
VPS72-201ENST00000354473 NPHP1O15259 732 aa24.39■■□□□ 1.5
VPS72-201ENST00000354473 CHRNA5P30532 468 aa24.39■■□□□ 1.5
VPS72-201ENST00000354473 PRR5LQ6MZQ0 368 aa24.39■■□□□ 1.5
VPS72-201ENST00000354473 CNBD1Q8NA66 436 aa24.39■■□□□ 1.5
VPS72-201ENST00000354473 DDX21Q9NR30 783 aaKnown RBP eCLIP24.39■■□□□ 1.5
VPS72-201ENST00000354473 CHPF2Q9P2E5 772 aa24.39■■□□□ 1.5
VPS72-201ENST00000354473 NIP7Q9Y221 180 aaKnown RBP eCLIP24.39■■□□□ 1.5
VPS72-201ENST00000354473 CCER2I3L3R5 266 aa24.38■■□□□ 1.49
VPS72-201ENST00000354473 ELL2O00472 640 aaPredicted RBP24.38■■□□□ 1.49
VPS72-201ENST00000354473 KCNA3P22001 575 aa24.37■■□□□ 1.49
VPS72-201ENST00000354473 NBPF5PQ86XG9 351 aaPredicted RBP24.37■■□□□ 1.49
VPS72-201ENST00000354473 CCDC24Q8N4L8 307 aa24.37■■□□□ 1.49
VPS72-201ENST00000354473 C8orf58Q8NAV2 365 aa24.37■■□□□ 1.49
VPS72-201ENST00000354473 DLEC1Q9Y238 1755 aa24.37■■□□□ 1.49
VPS72-201ENST00000354473 ATP10DQ9P241 1426 aa24.37■■□□□ 1.49
VPS72-201ENST00000354473 YY1P25490 414 aa24.36■■□□□ 1.49
VPS72-201ENST00000354473 DIEXFQ68CQ4 756 aaKnown RBP24.36■■□□□ 1.49
VPS72-201ENST00000354473 XAGE3Q8WTP9 111 aa24.36■■□□□ 1.49
VPS72-201ENST00000354473 DBF4Q9UBU7 674 aaPredicted RBP24.36■■□□□ 1.49
VPS72-201ENST00000354473 BCS1LQ9Y276 419 aa24.36■■□□□ 1.49
VPS72-201ENST00000354473 AIMP1Q12904 312 aaKnown RBP24.35■■□□□ 1.49
VPS72-201ENST00000354473 COPS6Q7L5N1 327 aa24.35■■□□□ 1.49
VPS72-201ENST00000354473 WDR63Q8IWG1 891 aa24.35■■□□□ 1.49
VPS72-201ENST00000354473 PIM2Q9P1W9 311 aa24.35■■□□□ 1.49
VPS72-201ENST00000354473 ST5P78524 1137 aa24.35■■□□□ 1.49
VPS72-201ENST00000354473 UTRNP46939 3433 aa24.34■■□□□ 1.49
VPS72-201ENST00000354473 COL11A2P13942 1736 aaPredicted RBP24.34■■□□□ 1.49
VPS72-201ENST00000354473 FAM177BA6PVY3 158 aa24.34■■□□□ 1.49
VPS72-201ENST00000354473 GIGYF2Q6Y7W6 1299 aaKnown RBP24.34■■□□□ 1.49
VPS72-201ENST00000354473 C2CD5Q86YS7 1000 aa24.34■■□□□ 1.49
VPS72-201ENST00000354473 BRIP1Q9BX63 1249 aa24.34■■□□□ 1.49
VPS72-201ENST00000354473 ARFGEF1Q9Y6D6 1849 aa24.33■■□□□ 1.49
VPS72-201ENST00000354473 TSPYL6Q8N831 410 aa24.33■■□□□ 1.48
VPS72-201ENST00000354473 FANCIQ9NVI1 1328 aa24.32■■□□□ 1.48
VPS72-201ENST00000354473 ANKRD36CQ5JPF3 1778 aa24.32■■□□□ 1.48
VPS72-201ENST00000354473 H0YIN7 160 aa24.32■■□□□ 1.48
VPS72-201ENST00000354473 GPTP24298 496 aa24.32■■□□□ 1.48
VPS72-201ENST00000354473 PDE6BP35913 854 aa24.32■■□□□ 1.48
VPS72-201ENST00000354473 DALRD3Q5D0E6 543 aaKnown RBP24.32■■□□□ 1.48
VPS72-201ENST00000354473 TPTE2Q6XPS3 522 aa24.32■■□□□ 1.48
VPS72-201ENST00000354473 HYPKQ9NX55 129 aa24.32■■□□□ 1.48
VPS72-201ENST00000354473 UBN2Q6ZU65 1347 aa24.31■■□□□ 1.48
VPS72-201ENST00000354473 ZNF34Q8IZ26 560 aa24.3■■□□□ 1.48
VPS72-201ENST00000354473 IBTKQ9P2D0 1353 aaPredicted RBP24.28■■□□□ 1.48
VPS72-201ENST00000354473 GTF2E1P29083 439 aaPredicted RBP24.28■■□□□ 1.48
VPS72-201ENST00000354473 TWISTNBQ3B726 338 aaPredicted RBP24.28■■□□□ 1.48
VPS72-201ENST00000354473 CCDC30Q5VVM6 783 aa24.28■■□□□ 1.48
VPS72-201ENST00000354473 CHMP4AQ9BY43 222 aa24.28■■□□□ 1.48
VPS72-201ENST00000354473 NYXQ9GZU5 481 aa24.28■■□□□ 1.48
VPS72-201ENST00000354473 SPINK5Q9NQ38 1064 aaPredicted RBP24.28■■□□□ 1.48
VPS72-201ENST00000354473 PDZRN3Q9UPQ7 1066 aa24.28■■□□□ 1.48
VPS72-201ENST00000354473 MIER1Q8N108 512 aa24.27■■□□□ 1.48
VPS72-201ENST00000354473 PLBD2Q8NHP8 589 aa24.27■■□□□ 1.48
VPS72-201ENST00000354473 ARFGEF2Q9Y6D5 1785 aa24.26■■□□□ 1.47
VPS72-201ENST00000354473 ZNF521Q96K83 1311 aa24.26■■□□□ 1.47
VPS72-201ENST00000354473 TNRC6CQ9HCJ0 1690 aaKnown RBP24.26■■□□□ 1.47
VPS72-201ENST00000354473 PARP10Q53GL7 1025 aa24.26■■□□□ 1.47
VPS72-201ENST00000354473 HSP90AB3PQ58FF7 597 aa24.26■■□□□ 1.47
VPS72-201ENST00000354473 SUSD4Q5VX71 490 aa24.26■■□□□ 1.47
VPS72-201ENST00000354473 NUTM1Q86Y26 1132 aa24.26■■□□□ 1.47
VPS72-201ENST00000354473 ZNF622Q969S3 477 aaKnown RBP eCLIP24.26■■□□□ 1.472e-12■□□□□ 10.5
VPS72-201ENST00000354473 MYH16Q9H6N6 1097 aa24.26■■□□□ 1.47
VPS72-201ENST00000354473 ABCC12Q96J65 1359 aa24.25■■□□□ 1.47
VPS72-201ENST00000354473 GOLGA2Q08379 1002 aa24.25■■□□□ 1.47
VPS72-201ENST00000354473 ANKRD13DQ6ZTN6 518 aa24.25■■□□□ 1.47
VPS72-201ENST00000354473 TTLL6Q8N841 843 aa24.25■■□□□ 1.47
VPS72-201ENST00000354473 PHAXQ9H814 394 aaKnown RBP24.25■■□□□ 1.47
VPS72-201ENST00000354473 ERFEQ4G0M1 354 aa24.24■■□□□ 1.47
VPS72-201ENST00000354473 ARHGAP27Q6ZUM4 889 aa24.24■■□□□ 1.47
VPS72-201ENST00000354473 CACNA1SQ13698 1873 aa24.24■■□□□ 1.47
VPS72-201ENST00000354473 TCERG1O14776 1098 aaKnown RBP24.23■■□□□ 1.47
VPS72-201ENST00000354473 NTSR2O95665 410 aa24.23■■□□□ 1.47
VPS72-201ENST00000354473 SRGNP10124 158 aa24.23■■□□□ 1.47
VPS72-201ENST00000354473 EXOSC9Q06265 439 aaKnown RBP24.23■■□□□ 1.47
VPS72-201ENST00000354473 TCIRG1Q13488 830 aa24.23■■□□□ 1.47
VPS72-201ENST00000354473 PPP1R42Q7Z4L9 355 aa24.23■■□□□ 1.47
VPS72-201ENST00000354473 STK31Q9BXU1 1019 aa24.23■■□□□ 1.47
VPS72-201ENST00000354473 STYK1Q6J9G0 422 aa24.21■■□□□ 1.47
VPS72-201ENST00000354473 NLRP10Q86W26 655 aa24.21■■□□□ 1.47
VPS72-201ENST00000354473 MASTLQ96GX5 879 aa24.21■■□□□ 1.47
VPS72-201ENST00000354473 UTP14AQ9BVJ6 771 aaKnown RBP24.21■■□□□ 1.47
VPS72-201ENST00000354473 RIC1Q4ADV7 1423 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms