RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 TMEM266Q2M3C6 531 aa11.56□□□□□ -0.56
COL11A1-201ENST00000353414 UNC13AQ9UPW8 1703 aa11.56□□□□□ -0.56
COL11A1-201ENST00000353414 NUDT16Q96DE0 195 aaKnown RBP11.56□□□□□ -0.56
COL11A1-201ENST00000353414 CIZ1Q9ULV3 898 aaPredicted RBP11.56□□□□□ -0.56
COL11A1-201ENST00000353414 GJA3Q9Y6H8 435 aa11.56□□□□□ -0.56
COL11A1-201ENST00000353414 ANXA1P04083 346 aa11.56□□□□□ -0.56
COL11A1-201ENST00000353414 C8orf76Q96K31 380 aa11.56□□□□□ -0.56
COL11A1-201ENST00000353414 ZSWIM4Q9H7M6 989 aa11.56□□□□□ -0.56
COL11A1-201ENST00000353414 PPP6R1Q9UPN7 881 aa11.56□□□□□ -0.56
COL11A1-201ENST00000353414 SCAPERQ9BY12 1400 aa11.56□□□□□ -0.56
COL11A1-201ENST00000353414 MCM2P49736 904 aa11.55□□□□□ -0.56
COL11A1-201ENST00000353414 TXLNBQ8N3L3 684 aa11.55□□□□□ -0.56
COL11A1-201ENST00000353414 SYNJ2O15056 1496 aa11.55□□□□□ -0.56
COL11A1-201ENST00000353414 ANKRD18BA2A2Z9 1011 aa11.55□□□□□ -0.56
COL11A1-201ENST00000353414 EXOC5O00471 708 aa11.55□□□□□ -0.56
COL11A1-201ENST00000353414 DDX46Q7L014 1031 aaKnown RBP11.55□□□□□ -0.56
COL11A1-201ENST00000353414 IQCA1Q86XH1 822 aa11.55□□□□□ -0.56
COL11A1-201ENST00000353414 TFIP11Q9UBB9 837 aaKnown RBP11.55□□□□□ -0.56
COL11A1-201ENST00000353414 RNF216Q9NWF9 866 aaPredicted RBP11.55□□□□□ -0.56
COL11A1-201ENST00000353414 AKAP2Q9Y2D5 859 aa11.55□□□□□ -0.56
COL11A1-201ENST00000353414 CCDC194A0A1B0GVG4 234 aa11.55□□□□□ -0.56
COL11A1-201ENST00000353414 EIF3JO75822 258 aaKnown RBP11.55□□□□□ -0.56
COL11A1-201ENST00000353414 CCDC40Q4G0X9 1142 aa11.55□□□□□ -0.56
COL11A1-201ENST00000353414 CATIPQ7Z7H3 387 aa11.55□□□□□ -0.56
COL11A1-201ENST00000353414 UIMC1Q96RL1 719 aa11.55□□□□□ -0.56
COL11A1-201ENST00000353414 FAM107BQ9H098 131 aa11.55□□□□□ -0.56
COL11A1-201ENST00000353414 PKD2L1Q9P0L9 805 aa11.55□□□□□ -0.56
COL11A1-201ENST00000353414 URI1O94763 535 aaPredicted RBP11.55□□□□□ -0.56
COL11A1-201ENST00000353414 IQCEQ6IPM2 695 aa11.55□□□□□ -0.56
COL11A1-201ENST00000353414 ERLIN1O75477 346 aa11.55□□□□□ -0.56
COL11A1-201ENST00000353414 MICU3Q86XE3 530 aa11.55□□□□□ -0.56
COL11A1-201ENST00000353414 SMTNL1A8MU46 457 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 CALM1P0DP23 149 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 CALM2P0DP24 149 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 CALM3P0DP25 149 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 ST5P78524 1137 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 KIF4BQ2VIQ3 1234 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 CNNM3Q8NE01 707 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 MAP3K2Q9Y2U5 619 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 U3KPZ7 1027 aaPredicted RBP11.54□□□□□ -0.56
COL11A1-201ENST00000353414 BAG4O95429 457 aaKnown RBP11.54□□□□□ -0.56
COL11A1-201ENST00000353414 LRSAM1Q6UWE0 723 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 ERBINQ96RT1 1412 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 ARID5AQ03989 594 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 ZNF692Q9BU19 519 aaPredicted RBP11.54□□□□□ -0.56
COL11A1-201ENST00000353414 FBLN1P23142 703 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 LRRC2Q9BYS8 371 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 CABP5Q9NP86 173 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 STX8Q9UNK0 236 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 A0A087WZG4 1122 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 PHACTR2O75167 634 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 PRKG1Q13976 671 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 CRACR2AQ9BSW2 395 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 KAT14Q9H8E8 782 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 LMTK3Q96Q04 1460 aa11.54□□□□□ -0.56
COL11A1-201ENST00000353414 TMEM67Q5HYA8 995 aa11.53□□□□□ -0.56
COL11A1-201ENST00000353414 SPECC1Q5M775 1068 aa11.53□□□□□ -0.56
COL11A1-201ENST00000353414 TMCO4Q5TGY1 634 aa11.53□□□□□ -0.56
COL11A1-201ENST00000353414 SLC26A6Q9BXS9 759 aa11.53□□□□□ -0.56
COL11A1-201ENST00000353414 EHMT1Q9H9B1 1298 aa11.53□□□□□ -0.56
COL11A1-201ENST00000353414 SH3BP5O60239 455 aa11.53□□□□□ -0.56
COL11A1-201ENST00000353414 TAF12Q16514 161 aa11.53□□□□□ -0.56
COL11A1-201ENST00000353414 MAP3K11Q16584 847 aa11.53□□□□□ -0.56
COL11A1-201ENST00000353414 PPP1R14CQ8TAE6 165 aa11.53□□□□□ -0.56
COL11A1-201ENST00000353414 MVPQ14764 893 aaKnown RBP11.52□□□□□ -0.56
COL11A1-201ENST00000353414 NBPF6Q5VWK0 638 aa11.52□□□□□ -0.56
COL11A1-201ENST00000353414 HEATR3Q7Z4Q2 680 aa11.52□□□□□ -0.56
COL11A1-201ENST00000353414 NBPF5PQ86XG9 351 aaPredicted RBP11.52□□□□□ -0.56
COL11A1-201ENST00000353414 NBPF4Q96M43 638 aa11.52□□□□□ -0.56
COL11A1-201ENST00000353414 AFMP43652 599 aa11.52□□□□□ -0.56
COL11A1-201ENST00000353414 PPARDQ03181 441 aa11.52□□□□□ -0.56
COL11A1-201ENST00000353414 NME9Q86XW9 330 aa11.52□□□□□ -0.56
COL11A1-201ENST00000353414 GRPEL1Q9HAV7 217 aa11.52□□□□□ -0.57
COL11A1-201ENST00000353414 MRVI1Q9Y6F6 885 aa11.52□□□□□ -0.57
COL11A1-201ENST00000353414 ANKRD50Q9ULJ7 1429 aa11.52□□□□□ -0.57
COL11A1-201ENST00000353414 CUX1P39880 1505 aa11.52□□□□□ -0.57
COL11A1-201ENST00000353414 TOP1P11387 765 aaKnown RBP11.52□□□□□ -0.57
COL11A1-201ENST00000353414 SBNO2Q9Y2G9 1366 aa11.52□□□□□ -0.57
COL11A1-201ENST00000353414 SYNJ1O43426 1573 aa11.52□□□□□ -0.57
COL11A1-201ENST00000353414 CALML4Q96GE6 196 aa11.52□□□□□ -0.57
COL11A1-201ENST00000353414 NAIPQ13075 1403 aa11.51□□□□□ -0.57
COL11A1-201ENST00000353414 ATP6V1AP38606 617 aa11.51□□□□□ -0.57
COL11A1-201ENST00000353414 RFX1P22670 979 aa11.51□□□□□ -0.57
COL11A1-201ENST00000353414 MAATS1Q7Z4T9 603 aa11.51□□□□□ -0.57
COL11A1-201ENST00000353414 KIF5CO60282 957 aa11.51□□□□□ -0.57
COL11A1-201ENST00000353414 TSPY3P0CV98 308 aa11.51□□□□□ -0.57
COL11A1-201ENST00000353414 TSPY8P0CW00 308 aa11.51□□□□□ -0.57
COL11A1-201ENST00000353414 CD109Q6YHK3 1445 aa11.51□□□□□ -0.57
COL11A1-201ENST00000353414 LDHAL6AQ6ZMR3 332 aa11.51□□□□□ -0.57
COL11A1-201ENST00000353414 PSMC4P43686 418 aa11.5□□□□□ -0.57
COL11A1-201ENST00000353414 FERP16591 822 aa11.5□□□□□ -0.57
COL11A1-201ENST00000353414 VPS36Q86VN1 386 aa11.5□□□□□ -0.57
COL11A1-201ENST00000353414 CCDC63Q8NA47 563 aa11.5□□□□□ -0.57
COL11A1-201ENST00000353414 TSNARE1Q96NA8 513 aa11.5□□□□□ -0.57
COL11A1-201ENST00000353414 PLIN2Q99541 437 aa11.5□□□□□ -0.57
COL11A1-201ENST00000353414 UTP14AQ9BVJ6 771 aaKnown RBP11.5□□□□□ -0.57
COL11A1-201ENST00000353414 HLA-DOAP06340 250 aa11.5□□□□□ -0.57
COL11A1-201ENST00000353414 HARSP12081 509 aaKnown RBP11.5□□□□□ -0.57
COL11A1-201ENST00000353414 PTGS1P23219 599 aa11.5□□□□□ -0.57
COL11A1-201ENST00000353414 STAC3Q96MF2 364 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms