RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 RAB11FIP4Q86YS3 637 aa21.68■■□□□ 1.06
UBE3C-201ENST00000348165 CCDC144CPQ8IYA2 1237 aa21.68■■□□□ 1.06
UBE3C-201ENST00000348165 PCDHB15Q9Y5E8 787 aa21.68■■□□□ 1.06
UBE3C-201ENST00000348165 ARHGAP45Q92619 1136 aa21.68■■□□□ 1.06
UBE3C-201ENST00000348165 TFIP11Q9UBB9 837 aaKnown RBP21.68■■□□□ 1.06
UBE3C-201ENST00000348165 RAPGEF6Q8TEU7 1601 aa21.68■■□□□ 1.06
UBE3C-201ENST00000348165 TTC22Q5TAA0 569 aa21.67■■□□□ 1.06
UBE3C-201ENST00000348165 GDPD2Q9HCC8 539 aa21.67■■□□□ 1.06
UBE3C-201ENST00000348165 MYO6Q9UM54 1294 aa21.67■■□□□ 1.06
UBE3C-201ENST00000348165 MTHFSDQ2M296 383 aaKnown RBP21.67■■□□□ 1.06
UBE3C-201ENST00000348165 NBPF6Q5VWK0 638 aa21.67■■□□□ 1.06
UBE3C-201ENST00000348165 NBPF5PQ86XG9 351 aaPredicted RBP21.67■■□□□ 1.06
UBE3C-201ENST00000348165 NBPF4Q96M43 638 aa21.67■■□□□ 1.06
UBE3C-201ENST00000348165 TTF1Q15361 905 aaPredicted RBP21.67■■□□□ 1.06
UBE3C-201ENST00000348165 CCDC112Q8NEF3 446 aa21.67■■□□□ 1.06
UBE3C-201ENST00000348165 USP16Q9Y5T5 823 aa21.66■■□□□ 1.06
UBE3C-201ENST00000348165 UBAP1LF5GYI3 381 aa21.66■■□□□ 1.06
UBE3C-201ENST00000348165 NCKAP5LQ9HCH0 1330 aa21.66■■□□□ 1.06
UBE3C-201ENST00000348165 MATR3P43243 847 aaKnown RBP eCLIP21.66■■□□□ 1.062e-6■■□□□ 12.7
UBE3C-201ENST00000348165 HSPA2P54652 639 aa21.66■■□□□ 1.06
UBE3C-201ENST00000348165 CCDC181Q5TID7 509 aa21.66■■□□□ 1.06
UBE3C-201ENST00000348165 IQSEC3Q9UPP2 1182 aaPredicted RBP21.66■■□□□ 1.06
UBE3C-201ENST00000348165 DUOX2Q9NRD8 1548 aa21.66■■□□□ 1.06
UBE3C-201ENST00000348165 LMBR1LQ6UX01 489 aa21.65■■□□□ 1.06
UBE3C-201ENST00000348165 CATIPQ7Z7H3 387 aa21.65■■□□□ 1.06
UBE3C-201ENST00000348165 SLF2Q8IX21 1173 aa21.65■■□□□ 1.06
UBE3C-201ENST00000348165 NLRP5P59047 1200 aa21.65■■□□□ 1.06
UBE3C-201ENST00000348165 SSRP1Q08945 709 aaKnown RBP21.65■■□□□ 1.06
UBE3C-201ENST00000348165 MICU3Q86XE3 530 aa21.65■■□□□ 1.06
UBE3C-201ENST00000348165 AKAP4Q5JQC9 854 aa21.65■■□□□ 1.06
UBE3C-201ENST00000348165 ZNF622Q969S3 477 aaKnown RBP eCLIP21.65■■□□□ 1.062e-6■■□□□ 12.8
UBE3C-201ENST00000348165 IBSPP21815 317 aaPredicted RBP21.65■■□□□ 1.06
UBE3C-201ENST00000348165 PRAG1Q86YV5 1406 aa21.65■■□□□ 1.06
UBE3C-201ENST00000348165 CCDC194A0A1B0GVG4 234 aa21.64■■□□□ 1.06
UBE3C-201ENST00000348165 TMEM67Q5HYA8 995 aa21.64■■□□□ 1.06
UBE3C-201ENST00000348165 ZMYND15Q9H091 742 aa21.64■■□□□ 1.06
UBE3C-201ENST00000348165 UGGT2Q9NYU1 1516 aa21.64■■□□□ 1.06
UBE3C-201ENST00000348165 UQCRHLA0A096LP55 91 aa21.64■■□□□ 1.06
UBE3C-201ENST00000348165 UQCRHP07919 91 aa21.64■■□□□ 1.06
UBE3C-201ENST00000348165 LDHCP07864 332 aa21.64■■□□□ 1.05
UBE3C-201ENST00000348165 ATP6V1AP38606 617 aa21.64■■□□□ 1.05
UBE3C-201ENST00000348165 KRI1Q8N9T8 703 aaKnown RBP21.64■■□□□ 1.05
UBE3C-201ENST00000348165 ZNF518AQ6AHZ1 1483 aa21.64■■□□□ 1.05
UBE3C-201ENST00000348165 KRT24Q2M2I5 525 aa21.64■■□□□ 1.05
UBE3C-201ENST00000348165 NFATC2IPQ8NCF5 419 aa21.64■■□□□ 1.05
UBE3C-201ENST00000348165 NEK1Q96PY6 1258 aa21.64■■□□□ 1.05
UBE3C-201ENST00000348165 CKAP2LQ8IYA6 745 aa21.63■■□□□ 1.05
UBE3C-201ENST00000348165 TNPO1Q92973 898 aaKnown RBP21.63■■□□□ 1.05
UBE3C-201ENST00000348165 RALGAPBQ86X10 1494 aa21.63■■□□□ 1.05
UBE3C-201ENST00000348165 TAF3Q5VWG9 929 aa21.63■■□□□ 1.05
UBE3C-201ENST00000348165 TESK2Q96S53 571 aa21.63■■□□□ 1.05
UBE3C-201ENST00000348165 VAT1LQ9HCJ6 419 aa21.63■■□□□ 1.05
UBE3C-201ENST00000348165 TSPY2A6NKD2 308 aa21.63■■□□□ 1.05
UBE3C-201ENST00000348165 SDSP20132 328 aa21.63■■□□□ 1.05
UBE3C-201ENST00000348165 GRM8O00222 908 aa21.63■■□□□ 1.05
UBE3C-201ENST00000348165 AXDND1Q5T1B0 1012 aaPredicted RBP21.63■■□□□ 1.05
UBE3C-201ENST00000348165 GJB2P29033 226 aa21.63■■□□□ 1.05
UBE3C-201ENST00000348165 IARSP41252 1262 aaKnown RBP21.63■■□□□ 1.05
UBE3C-201ENST00000348165 WDR78Q5VTH9 848 aa21.63■■□□□ 1.05
UBE3C-201ENST00000348165 KSR2Q6VAB6 950 aa21.62■■□□□ 1.05
UBE3C-201ENST00000348165 CHMP4BP1P59074 171 aa21.62■■□□□ 1.05
UBE3C-201ENST00000348165 CCDC152Q4G0S7 254 aa21.62■■□□□ 1.05
UBE3C-201ENST00000348165 MRPL50Q8N5N7 158 aaKnown RBP21.62■■□□□ 1.05
UBE3C-201ENST00000348165 ASXL1Q8IXJ9 1541 aa21.62■■□□□ 1.05
UBE3C-201ENST00000348165 TOM1O60784 492 aa21.62■■□□□ 1.05
UBE3C-201ENST00000348165 KCNA6P17658 529 aa21.62■■□□□ 1.05
UBE3C-201ENST00000348165 NUCB1Q02818 461 aa21.62■■□□□ 1.05
UBE3C-201ENST00000348165 HDAC1Q13547 482 aaPredicted RBP21.62■■□□□ 1.05
UBE3C-201ENST00000348165 TSPYL6Q8N831 410 aa21.62■■□□□ 1.05
UBE3C-201ENST00000348165 CARD14Q9BXL6 1004 aa21.62■■□□□ 1.05
UBE3C-201ENST00000348165 MFSD6Q6ZSS7 791 aa21.61■■□□□ 1.05
UBE3C-201ENST00000348165 ORC3Q9UBD5 711 aaPredicted RBP21.61■■□□□ 1.05
UBE3C-201ENST00000348165 EPB41L2O43491 1005 aaKnown RBP21.61■■□□□ 1.05
UBE3C-201ENST00000348165 BAG3O95817 575 aa21.61■■□□□ 1.05
UBE3C-201ENST00000348165 PHACTR3Q96KR7 559 aa21.61■■□□□ 1.05
UBE3C-201ENST00000348165 C19orf44Q9H6X5 657 aa21.61■■□□□ 1.05
UBE3C-201ENST00000348165 CCDC183Q5T5S1 534 aa21.61■■□□□ 1.05
UBE3C-201ENST00000348165 TCEANC2Q96MN5 208 aa21.61■■□□□ 1.05
UBE3C-201ENST00000348165 C8orf37Q96NL8 207 aa21.61■■□□□ 1.05
UBE3C-201ENST00000348165 ANO10Q9NW15 660 aa21.61■■□□□ 1.05
UBE3C-201ENST00000348165 TNNQ9UQP3 1299 aa21.61■■□□□ 1.05
UBE3C-201ENST00000348165 DDB1Q16531 1140 aa21.61■■□□□ 1.05
UBE3C-201ENST00000348165 WDR7Q9Y4E6 1490 aa21.6■■□□□ 1.05
UBE3C-201ENST00000348165 GCP02774 474 aa21.6■■□□□ 1.05
UBE3C-201ENST00000348165 ANKRD44Q8N8A2 993 aa21.6■■□□□ 1.05
UBE3C-201ENST00000348165 PANK2Q9BZ23 570 aa21.6■■□□□ 1.05
UBE3C-201ENST00000348165 UBA5Q9GZZ9 404 aa21.6■■□□□ 1.05
UBE3C-201ENST00000348165 PDE1AP54750 535 aa21.6■■□□□ 1.05
UBE3C-201ENST00000348165 TNIP1Q15025 636 aa21.6■■□□□ 1.05
UBE3C-201ENST00000348165 ATP2B3Q16720 1220 aa21.6■■□□□ 1.05
UBE3C-201ENST00000348165 EYA1Q99502 592 aa21.6■■□□□ 1.05
UBE3C-201ENST00000348165 TEX14Q8IWB6 1497 aa21.6■■□□□ 1.05
UBE3C-201ENST00000348165 KAT6BQ8WYB5 2073 aa21.6■■□□□ 1.05
UBE3C-201ENST00000348165 H0YHG0 523 aa21.6■■□□□ 1.05
UBE3C-201ENST00000348165 PA2G4Q9UQ80 394 aaKnown RBP21.6■■□□□ 1.05
UBE3C-201ENST00000348165 STX6O43752 255 aa21.59■■□□□ 1.05
UBE3C-201ENST00000348165 ARHGAP29Q52LW3 1261 aa21.59■■□□□ 1.05
UBE3C-201ENST00000348165 TXLNBQ8N3L3 684 aa21.59■■□□□ 1.05
UBE3C-201ENST00000348165 NCOA7Q8NI08 942 aa21.59■■□□□ 1.05
UBE3C-201ENST00000348165 UQCRFS1P1P0C7P4 283 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms