RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 CUL4AQ13619 759 aa7.38□□□□□ -1.23
CLCN3-201ENST00000347613 STRCP1A6NGW2 1772 aa7.38□□□□□ -1.23
CLCN3-201ENST00000347613 PXDNLA1KZ92 1463 aa7.38□□□□□ -1.23
CLCN3-201ENST00000347613 HSPA4P34932 840 aa7.38□□□□□ -1.23
CLCN3-201ENST00000347613 FGD1P98174 961 aa7.38□□□□□ -1.23
CLCN3-201ENST00000347613 RUFY3Q7L099 469 aa7.38□□□□□ -1.23
CLCN3-201ENST00000347613 PHRF1Q9P1Y6 1649 aaKnown RBP7.37□□□□□ -1.23
CLCN3-201ENST00000347613 REC8O95072 547 aa7.37□□□□□ -1.23
CLCN3-201ENST00000347613 BRD1O95696 1058 aa7.37□□□□□ -1.23
CLCN3-201ENST00000347613 AKAP4Q5JQC9 854 aa7.37□□□□□ -1.23
CLCN3-201ENST00000347613 TTC14Q96N46 770 aa7.37□□□□□ -1.23
CLCN3-201ENST00000347613 KDM6AO15550 1401 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-201ENST00000347613 SGSM2O43147 1006 aa7.37□□□□□ -1.23
CLCN3-201ENST00000347613 LRP10Q7Z4F1 713 aa7.37□□□□□ -1.23
CLCN3-201ENST00000347613 EAF2Q96CJ1 260 aaPredicted RBP7.37□□□□□ -1.23
CLCN3-201ENST00000347613 FAM227BQ96M60 508 aa7.37□□□□□ -1.23
CLCN3-201ENST00000347613 COL15A1P39059 1388 aa7.37□□□□□ -1.23
CLCN3-201ENST00000347613 NCAPD2Q15021 1401 aa7.37□□□□□ -1.23
CLCN3-201ENST00000347613 ADGRL3Q9HAR2 1447 aa7.37□□□□□ -1.23
CLCN3-201ENST00000347613 SYCE3A1L190 88 aa7.37□□□□□ -1.23
CLCN3-201ENST00000347613 ANKLE2Q86XL3 938 aa7.37□□□□□ -1.23
CLCN3-201ENST00000347613 BICC1Q9H694 974 aaKnown RBP7.37□□□□□ -1.23
CLCN3-201ENST00000347613 USP16Q9Y5T5 823 aa7.37□□□□□ -1.23
CLCN3-201ENST00000347613 ST18O60284 1047 aa7.36□□□□□ -1.23
CLCN3-201ENST00000347613 MYL6BP14649 208 aa7.36□□□□□ -1.23
CLCN3-201ENST00000347613 AK2P54819 239 aa7.36□□□□□ -1.23
CLCN3-201ENST00000347613 MPNDQ8N594 471 aa7.36□□□□□ -1.23
CLCN3-201ENST00000347613 NFATC2IPQ8NCF5 419 aa7.36□□□□□ -1.23
CLCN3-201ENST00000347613 TCEANC2Q96MN5 208 aa7.36□□□□□ -1.23
CLCN3-201ENST00000347613 CCDC8Q9H0W5 538 aaPredicted RBP7.36□□□□□ -1.23
CLCN3-201ENST00000347613 SIL1Q9H173 461 aa7.36□□□□□ -1.23
CLCN3-201ENST00000347613 CHRNA2Q15822 529 aa7.36□□□□□ -1.23
CLCN3-201ENST00000347613 IL17RAQ96F46 866 aa7.36□□□□□ -1.23
CLCN3-201ENST00000347613 SLIT3O75094 1523 aa7.36□□□□□ -1.23
CLCN3-201ENST00000347613 MEGF6O75095 1541 aa7.35□□□□□ -1.23
CLCN3-201ENST00000347613 CAMTA1Q9Y6Y1 1673 aa7.35□□□□□ -1.23
CLCN3-201ENST00000347613 ADAMTS7Q9UKP4 1686 aa7.35□□□□□ -1.23
CLCN3-201ENST00000347613 CLCN1P35523 988 aa7.35□□□□□ -1.23
CLCN3-201ENST00000347613 ZNF445P59923 1031 aa7.35□□□□□ -1.23
CLCN3-201ENST00000347613 TEFQ10587 303 aa7.35□□□□□ -1.23
CLCN3-201ENST00000347613 A0A0G2JLW4 131 aa7.35□□□□□ -1.23
CLCN3-201ENST00000347613 ESPNB1AK53 854 aa7.35□□□□□ -1.23
CLCN3-201ENST00000347613 KRT28Q7Z3Y7 464 aa7.35□□□□□ -1.23
CLCN3-201ENST00000347613 COL18A1P39060 1754 aa7.34□□□□□ -1.23
CLCN3-201ENST00000347613 RAD50Q92878 1312 aa7.34□□□□□ -1.23
CLCN3-201ENST00000347613 NASPP49321 788 aaPredicted RBP7.34□□□□□ -1.23
CLCN3-201ENST00000347613 NUCB2P80303 420 aa7.34□□□□□ -1.23
CLCN3-201ENST00000347613 CASC1Q6TDU7 716 aa7.34□□□□□ -1.23
CLCN3-201ENST00000347613 RNF214Q8ND24 703 aa7.34□□□□□ -1.23
CLCN3-201ENST00000347613 BABAM1Q9NWV8 329 aa7.34□□□□□ -1.23
CLCN3-201ENST00000347613 GLI3P10071 1580 aa7.34□□□□□ -1.23
CLCN3-201ENST00000347613 ZNF589Q86UQ0 364 aaPredicted RBP7.34□□□□□ -1.23
CLCN3-201ENST00000347613 USP48Q86UV5 1035 aa7.34□□□□□ -1.23
CLCN3-201ENST00000347613 NECAB1Q8N987 351 aa7.34□□□□□ -1.23
CLCN3-201ENST00000347613 ZNF496Q96IT1 587 aaPredicted RBP7.34□□□□□ -1.23
CLCN3-201ENST00000347613 PPP1R9BQ96SB3 815 aa7.34□□□□□ -1.23
CLCN3-201ENST00000347613 CNPY2Q9Y2B0 182 aa7.34□□□□□ -1.23
CLCN3-201ENST00000347613 SCN11AQ9UI33 1791 aa7.34□□□□□ -1.23
CLCN3-201ENST00000347613 ERBB3P21860 1342 aa7.34□□□□□ -1.23
CLCN3-201ENST00000347613 A0A0D9SFI3 127 aa7.34□□□□□ -1.23
CLCN3-201ENST00000347613 CYP27B1O15528 508 aa7.34□□□□□ -1.23
CLCN3-201ENST00000347613 FAM173BQ6P4H8 233 aa7.34□□□□□ -1.23
CLCN3-201ENST00000347613 KSR2Q6VAB6 950 aa7.34□□□□□ -1.23
CLCN3-201ENST00000347613 KIF1BPQ96EK5 621 aa7.34□□□□□ -1.23
CLCN3-201ENST00000347613 HYPKQ9NX55 129 aa7.34□□□□□ -1.23
CLCN3-201ENST00000347613 DBF4Q9UBU7 674 aaPredicted RBP7.34□□□□□ -1.23
CLCN3-201ENST00000347613 ALS2Q96Q42 1657 aa7.34□□□□□ -1.24
CLCN3-201ENST00000347613 MTX1Q13505 466 aa7.33□□□□□ -1.24
CLCN3-201ENST00000347613 SKOR2Q2VWA4 1001 aaPredicted RBP7.33□□□□□ -1.24
CLCN3-201ENST00000347613 PRPF40BQ6NWY9 871 aaKnown RBP7.33□□□□□ -1.24
CLCN3-201ENST00000347613 SEC62Q99442 399 aaKnown RBP7.33□□□□□ -1.24
CLCN3-201ENST00000347613 CWC22Q9HCG8 908 aaKnown RBP7.33□□□□□ -1.24
CLCN3-201ENST00000347613 PLEKHO1Q53GL0 409 aaPredicted RBP7.33□□□□□ -1.24
CLCN3-201ENST00000347613 USP42Q9H9J4 1324 aaKnown RBP7.33□□□□□ -1.24
CLCN3-201ENST00000347613 ATP5J2-PTCD1G3V325 749 aa7.33□□□□□ -1.24
CLCN3-201ENST00000347613 PTCD1O75127 700 aaKnown RBP7.33□□□□□ -1.24
CLCN3-201ENST00000347613 CASTP20810 708 aaKnown RBP7.33□□□□□ -1.24
CLCN3-201ENST00000347613 ZNF790Q6PG37 636 aa7.33□□□□□ -1.24
CLCN3-201ENST00000347613 COPS6Q7L5N1 327 aa7.33□□□□□ -1.24
CLCN3-201ENST00000347613 AACSQ86V21 672 aa7.33□□□□□ -1.24
CLCN3-201ENST00000347613 XAGE3Q8WTP9 111 aa7.33□□□□□ -1.24
CLCN3-201ENST00000347613 BOLA2Q9H3K6 86 aa7.33□□□□□ -1.24
CLCN3-201ENST00000347613 C1orf167Q5SNV9 1468 aa7.32□□□□□ -1.24
CLCN3-201ENST00000347613 NPHP4O75161 1426 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-201ENST00000347613 AP5Z1O43299 807 aa7.32□□□□□ -1.24
CLCN3-201ENST00000347613 RAB11FIP3O75154 756 aa7.32□□□□□ -1.24
CLCN3-201ENST00000347613 NMIQ13287 307 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-201ENST00000347613 NECTIN1Q15223 517 aa7.32□□□□□ -1.24
CLCN3-201ENST00000347613 ME3Q16798 604 aa7.32□□□□□ -1.24
CLCN3-201ENST00000347613 KCNH5Q8NCM2 988 aa7.32□□□□□ -1.24
CLCN3-201ENST00000347613 C9orf78Q9NZ63 289 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-201ENST00000347613 ZBTB22O15209 634 aa7.32□□□□□ -1.24
CLCN3-201ENST00000347613 SYT1P21579 422 aa7.32□□□□□ -1.24
CLCN3-201ENST00000347613 TPCN1Q9ULQ1 816 aa7.32□□□□□ -1.24
CLCN3-201ENST00000347613 CCDC9Q9Y3X0 531 aaKnown RBP7.32□□□□□ -1.24
CLCN3-201ENST00000347613 NEURL1BA8MQ27 555 aa7.32□□□□□ -1.24
CLCN3-201ENST00000347613 GRM8O00222 908 aa7.32□□□□□ -1.24
CLCN3-201ENST00000347613 RFX5P48382 616 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-201ENST00000347613 ANAPC15P60006 121 aa7.32□□□□□ -1.24
CLCN3-201ENST00000347613 TAF7LQ5H9L4 462 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms