RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 EIF2S2P20042 333 aaKnown RBP20.96■□□□□ 0.95
ATG4B-201ENST00000344376 PDE6BP35913 854 aa20.96■□□□□ 0.95
ATG4B-201ENST00000344376 ARHGAP27Q6ZUM4 889 aa20.96■□□□□ 0.95
ATG4B-201ENST00000344376 NBPF5PQ86XG9 351 aaPredicted RBP20.96■□□□□ 0.95
ATG4B-201ENST00000344376 C2CD5Q86YS7 1000 aa20.96■□□□□ 0.95
ATG4B-201ENST00000344376 BRIP1Q9BX63 1249 aa20.96■□□□□ 0.95
ATG4B-201ENST00000344376 CCDC184Q52MB2 194 aa20.95■□□□□ 0.94
ATG4B-201ENST00000344376 NIP7Q9Y221 180 aaKnown RBP eCLIP20.95■□□□□ 0.94
ATG4B-201ENST00000344376 BRCA1P38398 1863 aaKnown RBP20.95■□□□□ 0.94
ATG4B-201ENST00000344376 ERVV-1B6SEH8 477 aa20.94■□□□□ 0.94
ATG4B-201ENST00000344376 CFAP44Q96MT7 982 aa20.94■□□□□ 0.94
ATG4B-201ENST00000344376 MAP3K15Q6ZN16 1313 aa20.94■□□□□ 0.94
ATG4B-201ENST00000344376 HLFQ16534 295 aa20.92■□□□□ 0.94
ATG4B-201ENST00000344376 TPTE2Q6XPS3 522 aa20.92■□□□□ 0.94
ATG4B-201ENST00000344376 CCDC24Q8N4L8 307 aa20.92■□□□□ 0.94
ATG4B-201ENST00000344376 TTLL6Q8N841 843 aa20.92■□□□□ 0.94
ATG4B-201ENST00000344376 ATP10DQ9P241 1426 aa20.91■□□□□ 0.94
ATG4B-201ENST00000344376 HOXB7P09629 217 aa20.91■□□□□ 0.94
ATG4B-201ENST00000344376 GNAI1P63096 354 aa20.91■□□□□ 0.94
ATG4B-201ENST00000344376 TTLL7Q6ZT98 887 aa20.91■□□□□ 0.94
ATG4B-201ENST00000344376 IFT57Q9NWB7 429 aa20.91■□□□□ 0.94
ATG4B-201ENST00000344376 ARFGEF1Q9Y6D6 1849 aa20.9■□□□□ 0.94
ATG4B-201ENST00000344376 ZBTB3Q9H5J0 574 aa20.9■□□□□ 0.94
ATG4B-201ENST00000344376 ADCY9O60503 1353 aa20.9■□□□□ 0.94
ATG4B-201ENST00000344376 NECTIN2Q92692 538 aa20.89■□□□□ 0.94
ATG4B-201ENST00000344376 ZNF622Q969S3 477 aaKnown RBP eCLIP20.89■□□□□ 0.942e-6■■□□□ 11.6
ATG4B-201ENST00000344376 MBIPQ9NS73 344 aa20.89■□□□□ 0.94
ATG4B-201ENST00000344376 DLEC1Q9Y238 1755 aa20.89■□□□□ 0.93
ATG4B-201ENST00000344376 GTF2E1P29083 439 aaPredicted RBP20.89■□□□□ 0.93
ATG4B-201ENST00000344376 KRT24Q2M2I5 525 aa20.89■□□□□ 0.93
ATG4B-201ENST00000344376 NYXQ9GZU5 481 aa20.89■□□□□ 0.93
ATG4B-201ENST00000344376 FAM177BA6PVY3 158 aa20.88■□□□□ 0.93
ATG4B-201ENST00000344376 PDIA6Q15084 440 aa20.88■□□□□ 0.93
ATG4B-201ENST00000344376 HDGFL1Q5TGJ6 251 aa20.88■□□□□ 0.93
ATG4B-201ENST00000344376 ZNF853P0CG23 659 aa20.87■□□□□ 0.93
ATG4B-201ENST00000344376 PROSER3Q2NL68 480 aa20.87■□□□□ 0.93
ATG4B-201ENST00000344376 DDX21Q9NR30 783 aaKnown RBP eCLIP20.87■□□□□ 0.93
ATG4B-201ENST00000344376 ANKRD31Q8N7Z5 1873 aa20.86■□□□□ 0.93
ATG4B-201ENST00000344376 ANXA1P04083 346 aa20.86■□□□□ 0.93
ATG4B-201ENST00000344376 GIGYF2Q6Y7W6 1299 aaKnown RBP20.86■□□□□ 0.93
ATG4B-201ENST00000344376 CNKSR1Q969H4 720 aa20.86■□□□□ 0.93
ATG4B-201ENST00000344376 DUSP27Q5VZP5 1158 aa20.85■□□□□ 0.93
ATG4B-201ENST00000344376 STYK1Q6J9G0 422 aa20.85■□□□□ 0.93
ATG4B-201ENST00000344376 LRP10Q7Z4F1 713 aa20.85■□□□□ 0.93
ATG4B-201ENST00000344376 MASTLQ96GX5 879 aa20.85■□□□□ 0.93
ATG4B-201ENST00000344376 GPBP1L1Q9HC44 474 aaPredicted RBP20.85■□□□□ 0.93
ATG4B-201ENST00000344376 GPTP24298 496 aa20.85■□□□□ 0.93
ATG4B-201ENST00000344376 CCDC27Q2M243 656 aa20.85■□□□□ 0.93
ATG4B-201ENST00000344376 IBTKQ9P2D0 1353 aaPredicted RBP20.84■□□□□ 0.93
ATG4B-201ENST00000344376 SRGNP10124 158 aa20.84■□□□□ 0.93
ATG4B-201ENST00000344376 AIMP1Q12904 312 aaKnown RBP20.84■□□□□ 0.93
ATG4B-201ENST00000344376 C9orf131Q5VYM1 1079 aa20.84■□□□□ 0.93
ATG4B-201ENST00000344376 COPS6Q7L5N1 327 aa20.84■□□□□ 0.93
ATG4B-201ENST00000344376 XAGE3Q8WTP9 111 aa20.84■□□□□ 0.93
ATG4B-201ENST00000344376 CHPF2Q9P2E5 772 aa20.84■□□□□ 0.93
ATG4B-201ENST00000344376 DBF4Q9UBU7 674 aaPredicted RBP20.84■□□□□ 0.93
ATG4B-201ENST00000344376 PARP10Q53GL7 1025 aa20.83■□□□□ 0.92
ATG4B-201ENST00000344376 HSP90AB3PQ58FF7 597 aa20.83■□□□□ 0.92
ATG4B-201ENST00000344376 ZNF526Q8TF50 670 aaPredicted RBP20.83■□□□□ 0.92
ATG4B-201ENST00000344376 COL11A2P13942 1736 aaPredicted RBP20.83■□□□□ 0.92
ATG4B-201ENST00000344376 NPR1P16066 1061 aa20.82■□□□□ 0.92
ATG4B-201ENST00000344376 NCBP3Q53F19 620 aaKnown RBP20.82■□□□□ 0.92
ATG4B-201ENST00000344376 PPP1R42Q7Z4L9 355 aa20.82■□□□□ 0.92
ATG4B-201ENST00000344376 ZNF34Q8IZ26 560 aa20.82■□□□□ 0.92
ATG4B-201ENST00000344376 CHMP4AQ9BY43 222 aa20.82■□□□□ 0.92
ATG4B-201ENST00000344376 NUP98P52948 1817 aa20.82■□□□□ 0.92
ATG4B-201ENST00000344376 UBN2Q6ZU65 1347 aa20.81■□□□□ 0.92
ATG4B-201ENST00000344376 RNF181Q9P0P0 153 aa20.81■□□□□ 0.92
ATG4B-201ENST00000344376 KLRG2A4D1S0 409 aaPredicted RBP20.8■□□□□ 0.92
ATG4B-201ENST00000344376 NUTM1Q86Y26 1132 aa20.8■□□□□ 0.92
ATG4B-201ENST00000344376 WWC1Q8IX03 1113 aa20.8■□□□□ 0.92
ATG4B-201ENST00000344376 HYPKQ9NX55 129 aa20.8■□□□□ 0.92
ATG4B-201ENST00000344376 SOGA3Q5TF21 947 aa20.8■□□□□ 0.92
ATG4B-201ENST00000344376 SUSD4Q5VX71 490 aa20.8■□□□□ 0.92
ATG4B-201ENST00000344376 PRPF40BQ6NWY9 871 aaKnown RBP20.8■□□□□ 0.92
ATG4B-201ENST00000344376 ZNF219Q9P2Y4 722 aaPredicted RBP20.8■□□□□ 0.92
ATG4B-201ENST00000344376 SENP3-EIF4A1A0A087X0R7 540 aa20.79■□□□□ 0.92
ATG4B-201ENST00000344376 C21orf2O43822 256 aa20.79■□□□□ 0.92
ATG4B-201ENST00000344376 RASSF7Q02833 373 aa20.79■□□□□ 0.92
ATG4B-201ENST00000344376 ERFEQ4G0M1 354 aa20.79■□□□□ 0.92
ATG4B-201ENST00000344376 ABCC12Q96J65 1359 aa20.79■□□□□ 0.92
ATG4B-201ENST00000344376 ELL2O00472 640 aaPredicted RBP20.78■□□□□ 0.92
ATG4B-201ENST00000344376 LMNB1P20700 586 aa20.78■□□□□ 0.92
ATG4B-201ENST00000344376 RIC1Q4ADV7 1423 aa20.78■□□□□ 0.92
ATG4B-201ENST00000344376 IL16Q14005 1332 aa20.78■□□□□ 0.92
ATG4B-201ENST00000344376 NTSR2O95665 410 aa20.77■□□□□ 0.92
ATG4B-201ENST00000344376 FAM9BQ8IZU0 186 aa20.77■□□□□ 0.92
ATG4B-201ENST00000344376 UTP14AQ9BVJ6 771 aaKnown RBP20.77■□□□□ 0.92
ATG4B-201ENST00000344376 RNF123Q5XPI4 1314 aa20.77■□□□□ 0.92
ATG4B-201ENST00000344376 ALDH1B1P30837 517 aa20.76■□□□□ 0.91
ATG4B-201ENST00000344376 PLBD2Q8NHP8 589 aa20.76■□□□□ 0.91
ATG4B-201ENST00000344376 C1QTNF8P60827 252 aa20.76■□□□□ 0.91
ATG4B-201ENST00000344376 TCIRG1Q13488 830 aa20.76■□□□□ 0.91
ATG4B-201ENST00000344376 ANKRD13DQ6ZTN6 518 aa20.76■□□□□ 0.91
ATG4B-201ENST00000344376 C8orf58Q8NAV2 365 aa20.76■□□□□ 0.91
ATG4B-201ENST00000344376 RPGRQ92834 1020 aaKnown RBP20.76■□□□□ 0.91
ATG4B-201ENST00000344376 ZC3H4Q9UPT8 1303 aaKnown RBP20.75■□□□□ 0.91
ATG4B-201ENST00000344376 NFKBIEO00221 500 aa20.75■□□□□ 0.91
ATG4B-201ENST00000344376 CRY2Q49AN0 593 aa20.75■□□□□ 0.91
ATG4B-201ENST00000344376 CCDC30Q5VVM6 783 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms