RNA–Protein interactions for RNA: ENST00000343258.8

VAV3-201, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene VAV3, Length 2,552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-201ENST00000343258 PNISRQ8TF01 805 aaKnown RBP5.95□□□□□ -1.46
VAV3-201ENST00000343258 RUNDC1Q96C34 613 aa5.95□□□□□ -1.46
VAV3-201ENST00000343258 FMNL2Q96PY5 1086 aa5.95□□□□□ -1.46
VAV3-201ENST00000343258 CHMP4BQ9H444 224 aaKnown RBP5.95□□□□□ -1.46
VAV3-201ENST00000343258 CLEC11AQ9Y240 323 aa5.95□□□□□ -1.46
VAV3-201ENST00000343258 SOS1Q07889 1333 aaPredicted RBP5.95□□□□□ -1.46
VAV3-201ENST00000343258 SIPA1L3O60292 1781 aaPredicted RBP5.95□□□□□ -1.46
VAV3-201ENST00000343258 HTATSF1O43719 755 aaKnown RBP5.95□□□□□ -1.46
VAV3-201ENST00000343258 POLD1P28340 1107 aa5.95□□□□□ -1.46
VAV3-201ENST00000343258 RFC4P35249 363 aa5.95□□□□□ -1.46
VAV3-201ENST00000343258 USPL1Q5W0Q7 1092 aa5.95□□□□□ -1.46
VAV3-201ENST00000343258 NAP1L5Q96NT1 182 aaPredicted RBP5.95□□□□□ -1.46
VAV3-201ENST00000343258 BCL2L12Q9HB09 334 aa5.95□□□□□ -1.46
VAV3-201ENST00000343258 DLG5Q8TDM6 1919 aa5.95□□□□□ -1.46
VAV3-201ENST00000343258 NBPF26B4DH59 902 aa5.94□□□□□ -1.46
VAV3-201ENST00000343258 EIF4A1P60842 406 aaKnown RBP5.94□□□□□ -1.46
VAV3-201ENST00000343258 DDR1Q08345 913 aa5.94□□□□□ -1.46
VAV3-201ENST00000343258 NBPF10Q6P3W6 841 aaKnown RBP5.94□□□□□ -1.46
VAV3-201ENST00000343258 NBPF15Q8N660 670 aa5.94□□□□□ -1.46
VAV3-201ENST00000343258 FLAD1Q8NFF5 587 aa5.94□□□□□ -1.46
VAV3-201ENST00000343258 TBC1D2BQ9UPU7 963 aa5.94□□□□□ -1.46
VAV3-201ENST00000343258 USP42Q9H9J4 1324 aaKnown RBP5.94□□□□□ -1.46
VAV3-201ENST00000343258 UBR2Q8IWV8 1755 aa5.94□□□□□ -1.46
VAV3-201ENST00000343258 EIF5P55010 431 aaKnown RBP5.94□□□□□ -1.46
VAV3-201ENST00000343258 DHX37Q8IY37 1157 aaKnown RBP5.94□□□□□ -1.46
VAV3-201ENST00000343258 REM2Q8IYK8 340 aaPredicted RBP5.94□□□□□ -1.46
VAV3-201ENST00000343258 QSER1Q2KHR3 1735 aa5.94□□□□□ -1.46
VAV3-201ENST00000343258 ZNF831Q5JPB2 1677 aa5.93□□□□□ -1.46
VAV3-201ENST00000343258 COL15A1P39059 1388 aa5.93□□□□□ -1.46
VAV3-201ENST00000343258 GIGYF1O75420 1035 aaPredicted RBP5.93□□□□□ -1.46
VAV3-201ENST00000343258 STARD3NLO95772 234 aa5.93□□□□□ -1.46
VAV3-201ENST00000343258 ANXA1P04083 346 aa5.93□□□□□ -1.46
VAV3-201ENST00000343258 CCDC24Q8N4L8 307 aa5.93□□□□□ -1.46
VAV3-201ENST00000343258 NECTIN2Q92692 538 aa5.93□□□□□ -1.46
VAV3-201ENST00000343258 TSPYL4Q9UJ04 414 aa5.93□□□□□ -1.46
VAV3-201ENST00000343258 SNRPA1P09661 255 aaKnown RBP5.93□□□□□ -1.46
VAV3-201ENST00000343258 BICDL1Q6ZP65 573 aa5.93□□□□□ -1.46
VAV3-201ENST00000343258 FAM9BQ8IZU0 186 aa5.93□□□□□ -1.46
VAV3-201ENST00000343258 NGEFQ8N5V2 710 aa5.93□□□□□ -1.46
VAV3-201ENST00000343258 PNNQ9H307 717 aaKnown RBP5.93□□□□□ -1.46
VAV3-201ENST00000343258 PPP4R2Q9NY27 417 aa5.93□□□□□ -1.46
VAV3-201ENST00000343258 PRDM4Q9UKN5 801 aa5.93□□□□□ -1.46
VAV3-201ENST00000343258 NFIXQ14938 502 aa5.92□□□□□ -1.46
VAV3-201ENST00000343258 PROSER3Q2NL68 480 aa5.92□□□□□ -1.46
VAV3-201ENST00000343258 C4AP0C0L4 1744 aa5.92□□□□□ -1.46
VAV3-201ENST00000343258 CEP350Q5VT06 3117 aa5.92□□□□□ -1.46
VAV3-201ENST00000343258 YBX3P16989 372 aaKnown RBP eCLIP5.92□□□□□ -1.46
VAV3-201ENST00000343258 EIF2S2P20042 333 aaKnown RBP5.92□□□□□ -1.46
VAV3-201ENST00000343258 B4GALNT3Q6L9W6 998 aa5.92□□□□□ -1.46
VAV3-201ENST00000343258 NLGN1Q8N2Q7 840 aa5.92□□□□□ -1.46
VAV3-201ENST00000343258 FRAT1Q92837 279 aaPredicted RBP5.92□□□□□ -1.46
VAV3-201ENST00000343258 ZNF428Q96B54 188 aa5.92□□□□□ -1.46
VAV3-201ENST00000343258 NARFQ9UHQ1 456 aa5.92□□□□□ -1.46
VAV3-201ENST00000343258 CICQ96RK0 1608 aaPredicted RBP5.92□□□□□ -1.46
VAV3-201ENST00000343258 COL24A1Q17RW2 1714 aa5.91□□□□□ -1.46
VAV3-201ENST00000343258 A0A0G2JLW4 131 aa5.91□□□□□ -1.46
VAV3-201ENST00000343258 POLRMTO00411 1230 aaKnown RBP5.91□□□□□ -1.46
VAV3-201ENST00000343258 ELL2O00472 640 aaPredicted RBP5.91□□□□□ -1.46
VAV3-201ENST00000343258 CHL1O00533 1208 aa5.91□□□□□ -1.46
VAV3-201ENST00000343258 ZPR1O75312 459 aa5.91□□□□□ -1.46
VAV3-201ENST00000343258 CAMTA2O94983 1202 aa5.91□□□□□ -1.46
VAV3-201ENST00000343258 MYL6BP14649 208 aa5.91□□□□□ -1.46
VAV3-201ENST00000343258 TM4SF1P30408 202 aa5.91□□□□□ -1.46
VAV3-201ENST00000343258 TBC1D9BQ66K14 1250 aa5.91□□□□□ -1.46
VAV3-201ENST00000343258 TTLL7Q6ZT98 887 aa5.91□□□□□ -1.46
VAV3-201ENST00000343258 MBIPQ9NS73 344 aa5.91□□□□□ -1.46
VAV3-201ENST00000343258 PITPNM1O00562 1244 aa5.91□□□□□ -1.46
VAV3-201ENST00000343258 IL6STP40189 918 aaPredicted RBP5.91□□□□□ -1.46
VAV3-201ENST00000343258 HLFQ16534 295 aa5.91□□□□□ -1.46
VAV3-201ENST00000343258 TSR2Q969E8 191 aaKnown RBP5.91□□□□□ -1.46
VAV3-201ENST00000343258 TEX13AQ9BXU3 409 aaPredicted RBP5.91□□□□□ -1.46
VAV3-201ENST00000343258 CARMIL3Q8ND23 1372 aa5.9□□□□□ -1.46
VAV3-201ENST00000343258 ZNF853P0CG23 659 aa5.9□□□□□ -1.46
VAV3-201ENST00000343258 PDIA6Q15084 440 aa5.9□□□□□ -1.46
VAV3-201ENST00000343258 LRP10Q7Z4F1 713 aa5.9□□□□□ -1.46
VAV3-201ENST00000343258 DZIP3Q86Y13 1208 aaKnown RBP5.9□□□□□ -1.46
VAV3-201ENST00000343258 KDM3BQ7LBC6 1761 aa5.9□□□□□ -1.46
VAV3-201ENST00000343258 CHRNA5P30532 468 aa5.9□□□□□ -1.47
VAV3-201ENST00000343258 LMOD3Q0VAK6 560 aa5.9□□□□□ -1.47
VAV3-201ENST00000343258 GPR162Q16538 588 aa5.9□□□□□ -1.47
VAV3-201ENST00000343258 WWC1Q8IX03 1113 aa5.9□□□□□ -1.47
VAV3-201ENST00000343258 TSPYL6Q8N831 410 aa5.9□□□□□ -1.47
VAV3-201ENST00000343258 CD2APQ9Y5K6 639 aa5.9□□□□□ -1.47
VAV3-201ENST00000343258 PARP3Q9Y6F1 533 aa5.9□□□□□ -1.47
VAV3-201ENST00000343258 FAM177BA6PVY3 158 aa5.89□□□□□ -1.47
VAV3-201ENST00000343258 DPEP1P16444 411 aa5.89□□□□□ -1.47
VAV3-201ENST00000343258 KCNA3P22001 575 aa5.89□□□□□ -1.47
VAV3-201ENST00000343258 HMGB2P26583 209 aaKnown RBP5.89□□□□□ -1.47
VAV3-201ENST00000343258 GTF2E1P29083 439 aaPredicted RBP5.89□□□□□ -1.47
VAV3-201ENST00000343258 CALD1Q05682 793 aaKnown RBP5.89□□□□□ -1.47
VAV3-201ENST00000343258 PLCD3Q8N3E9 789 aa5.89□□□□□ -1.47
VAV3-201ENST00000343258 C8orf58Q8NAV2 365 aa5.89□□□□□ -1.47
VAV3-201ENST00000343258 CFAP44Q96MT7 982 aa5.89□□□□□ -1.47
VAV3-201ENST00000343258 ZBTB3Q9H5J0 574 aa5.89□□□□□ -1.47
VAV3-201ENST00000343258 RRAGDQ9NQL2 400 aaPredicted RBP5.89□□□□□ -1.47
VAV3-201ENST00000343258 PXDNLA1KZ92 1463 aa5.89□□□□□ -1.47
VAV3-201ENST00000343258 C10orf71Q711Q0 1435 aa5.89□□□□□ -1.47
VAV3-201ENST00000343258 TCERG1O14776 1098 aaKnown RBP5.89□□□□□ -1.47
VAV3-201ENST00000343258 SERPINB2P05120 415 aa5.89□□□□□ -1.47
VAV3-201ENST00000343258 NPM2Q86SE8 214 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms