RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 ATF3P18847 181 aa14.63□□□□□ -0.07
SNRNP48-201ENST00000342415 EVI5LQ96CN4 794 aa14.63□□□□□ -0.07
SNRNP48-201ENST00000342415 ABCC1P33527 1531 aa14.62□□□□□ -0.07
SNRNP48-201ENST00000342415 LRRFIP1Q32MZ4 808 aaKnown RBP14.62□□□□□ -0.07
SNRNP48-201ENST00000342415 GOLIM4O00461 696 aa14.62□□□□□ -0.07
SNRNP48-201ENST00000342415 STRN4Q9NRL3 753 aa14.62□□□□□ -0.07
SNRNP48-201ENST00000342415 NMIQ13287 307 aaPredicted RBP14.61□□□□□ -0.07
SNRNP48-201ENST00000342415 OLFM4Q6UX06 510 aa14.61□□□□□ -0.07
SNRNP48-201ENST00000342415 FSIP1Q8NA03 581 aa14.61□□□□□ -0.07
SNRNP48-201ENST00000342415 SNX14Q9Y5W7 946 aa14.61□□□□□ -0.07
SNRNP48-201ENST00000342415 RTL1A6NKG5 1358 aa14.61□□□□□ -0.07
SNRNP48-201ENST00000342415 SOS1Q07889 1333 aaPredicted RBP14.61□□□□□ -0.07
SNRNP48-201ENST00000342415 A0A087WZG4 1122 aa14.61□□□□□ -0.07
SNRNP48-201ENST00000342415 BRD1O95696 1058 aa14.61□□□□□ -0.07
SNRNP48-201ENST00000342415 PPP1R9BQ96SB3 815 aa14.61□□□□□ -0.07
SNRNP48-201ENST00000342415 FAM227BQ96M60 508 aa14.6□□□□□ -0.07
SNRNP48-201ENST00000342415 PHF23Q9BUL5 403 aaPredicted RBP14.6□□□□□ -0.07
SNRNP48-201ENST00000342415 ARHGEF5Q12774 1597 aa14.6□□□□□ -0.07
SNRNP48-201ENST00000342415 KDM5AP29375 1690 aaKnown RBP14.6□□□□□ -0.07
SNRNP48-201ENST00000342415 PIK3R4Q99570 1358 aa14.6□□□□□ -0.07
SNRNP48-201ENST00000342415 INTS4Q96HW7 963 aaKnown RBP14.6□□□□□ -0.07
SNRNP48-201ENST00000342415 CABP4P57796 275 aa14.6□□□□□ -0.07
SNRNP48-201ENST00000342415 TYRO3Q06418 890 aa14.6□□□□□ -0.07
SNRNP48-201ENST00000342415 CFAP100Q494V2 611 aa14.6□□□□□ -0.07
SNRNP48-201ENST00000342415 KAT6BQ8WYB5 2073 aa14.6□□□□□ -0.07
SNRNP48-201ENST00000342415 KRT32Q14532 448 aa14.59□□□□□ -0.07
SNRNP48-201ENST00000342415 SAFBQ15424 915 aaKnown RBP eCLIP14.59□□□□□ -0.07
SNRNP48-201ENST00000342415 TTC39AQ5SRH9 613 aa14.59□□□□□ -0.07
SNRNP48-201ENST00000342415 TRPM1Q7Z4N2 1603 aa14.59□□□□□ -0.07
SNRNP48-201ENST00000342415 TATP17735 454 aaPredicted RBP14.59□□□□□ -0.07
SNRNP48-201ENST00000342415 UVSSAQ2YD98 709 aa14.59□□□□□ -0.07
SNRNP48-201ENST00000342415 HS1BP3Q53T59 392 aa14.59□□□□□ -0.07
SNRNP48-201ENST00000342415 FAM200AQ8TCP9 573 aa14.59□□□□□ -0.07
SNRNP48-201ENST00000342415 EDC3Q96F86 508 aaKnown RBP14.59□□□□□ -0.07
SNRNP48-201ENST00000342415 NEK1Q96PY6 1258 aa14.59□□□□□ -0.07
SNRNP48-201ENST00000342415 KIF2CQ99661 725 aa14.59□□□□□ -0.07
SNRNP48-201ENST00000342415 LGR6Q9HBX8 967 aa14.59□□□□□ -0.07
SNRNP48-201ENST00000342415 TTC37Q6PGP7 1564 aa14.59□□□□□ -0.07
SNRNP48-201ENST00000342415 CCDC144CPQ8IYA2 1237 aa14.59□□□□□ -0.07
SNRNP48-201ENST00000342415 ERCC4Q92889 916 aaPredicted RBP14.59□□□□□ -0.07
SNRNP48-201ENST00000342415 CCAR1Q8IX12 1150 aaKnown RBP14.59□□□□□ -0.07
SNRNP48-201ENST00000342415 ARGLU1Q9NWB6 273 aaPredicted RBP14.59□□□□□ -0.07
SNRNP48-201ENST00000342415 ATP7AQ04656 1500 aa14.58□□□□□ -0.07
SNRNP48-201ENST00000342415 ABCA8O94911 1581 aa14.58□□□□□ -0.07
SNRNP48-201ENST00000342415 CEP126Q9P2H0 1117 aa14.58□□□□□ -0.08
SNRNP48-201ENST00000342415 SYNMO15061 1565 aa14.58□□□□□ -0.08
SNRNP48-201ENST00000342415 IDH1O75874 414 aaKnown RBP14.58□□□□□ -0.08
SNRNP48-201ENST00000342415 CREB3L3Q68CJ9 461 aa14.58□□□□□ -0.08
SNRNP48-201ENST00000342415 GOLGA6L1Q8N7Z2 621 aa14.58□□□□□ -0.08
SNRNP48-201ENST00000342415 PCMTD1Q96MG8 357 aaPredicted RBP14.58□□□□□ -0.08
SNRNP48-201ENST00000342415 PDE4CQ08493 712 aa14.58□□□□□ -0.08
SNRNP48-201ENST00000342415 CCDC158Q5M9N0 1113 aa14.58□□□□□ -0.08
SNRNP48-201ENST00000342415 LARP1Q6PKG0 1096 aaKnown RBP14.58□□□□□ -0.08
SNRNP48-201ENST00000342415 PIBF1Q8WXW3 757 aa14.58□□□□□ -0.08
SNRNP48-201ENST00000342415 PRIMPOLQ96LW4 560 aa14.58□□□□□ -0.08
SNRNP48-201ENST00000342415 USP44Q9H0E7 712 aa14.58□□□□□ -0.08
SNRNP48-201ENST00000342415 PHF8Q9UPP1 1060 aa14.58□□□□□ -0.08
SNRNP48-201ENST00000342415 RASEFQ8IZ41 740 aa14.57□□□□□ -0.08
SNRNP48-201ENST00000342415 ZBTB3Q9H5J0 574 aa14.57□□□□□ -0.08
SNRNP48-201ENST00000342415 DDX19AQ9NUU7 478 aaKnown RBP14.57□□□□□ -0.08
SNRNP48-201ENST00000342415 CGNQ9P2M7 1197 aaKnown RBP14.57□□□□□ -0.08
SNRNP48-201ENST00000342415 SBNO2Q9Y2G9 1366 aa14.57□□□□□ -0.08
SNRNP48-201ENST00000342415 SGSM2O43147 1006 aa14.57□□□□□ -0.08
SNRNP48-201ENST00000342415 SFPQP23246 707 aaKnown RBP eCLIP14.57□□□□□ -0.08
SNRNP48-201ENST00000342415 CCDC129Q6ZRS4 1044 aa14.57□□□□□ -0.08
SNRNP48-201ENST00000342415 COPS6Q7L5N1 327 aa14.57□□□□□ -0.08
SNRNP48-201ENST00000342415 NUP133Q8WUM0 1156 aa14.57□□□□□ -0.08
SNRNP48-201ENST00000342415 URI1O94763 535 aaPredicted RBP14.56□□□□□ -0.08
SNRNP48-201ENST00000342415 IFIT1P09914 478 aaKnown RBP14.56□□□□□ -0.08
SNRNP48-201ENST00000342415 CCDC57Q2TAC2 916 aa14.56□□□□□ -0.08
SNRNP48-201ENST00000342415 TEX35Q5T0J7 233 aa14.56□□□□□ -0.08
SNRNP48-201ENST00000342415 Q6ZUG5 572 aa14.56□□□□□ -0.08
SNRNP48-201ENST00000342415 CNNM1Q9NRU3 951 aa14.56□□□□□ -0.08
SNRNP48-201ENST00000342415 CDC42BPAQ5VT25 1732 aa14.56□□□□□ -0.08
SNRNP48-201ENST00000342415 TPM1P09493 284 aa14.56□□□□□ -0.08
SNRNP48-201ENST00000342415 DHX16O60231 1041 aaKnown RBP14.56□□□□□ -0.08
SNRNP48-201ENST00000342415 TMC6Q7Z403 805 aa14.56□□□□□ -0.08
SNRNP48-201ENST00000342415 ERICH2A1L162 156 aa14.55□□□□□ -0.08
SNRNP48-201ENST00000342415 KCNQ3O43525 872 aa14.55□□□□□ -0.08
SNRNP48-201ENST00000342415 SKILP12757 684 aa14.55□□□□□ -0.08
SNRNP48-201ENST00000342415 HSP90AB3PQ58FF7 597 aa14.55□□□□□ -0.08
SNRNP48-201ENST00000342415 C8orf76Q96K31 380 aa14.55□□□□□ -0.08
SNRNP48-201ENST00000342415 POLR3GO15318 223 aaPredicted RBP14.55□□□□□ -0.08
SNRNP48-201ENST00000342415 TSR1Q2NL82 804 aaKnown RBP14.55□□□□□ -0.08
SNRNP48-201ENST00000342415 KIF18AQ8NI77 898 aa14.55□□□□□ -0.08
SNRNP48-201ENST00000342415 ANO10Q9NW15 660 aa14.55□□□□□ -0.08
SNRNP48-201ENST00000342415 PTH1RQ03431 593 aa14.55□□□□□ -0.08
SNRNP48-201ENST00000342415 XAGE3Q8WTP9 111 aa14.55□□□□□ -0.08
SNRNP48-201ENST00000342415 ZFYVE9O95405 1425 aa14.55□□□□□ -0.08
SNRNP48-201ENST00000342415 GRM8O00222 908 aa14.55□□□□□ -0.08
SNRNP48-201ENST00000342415 KLHL10Q6JEL2 608 aa14.54□□□□□ -0.08
SNRNP48-201ENST00000342415 UBXN4Q92575 508 aa14.54□□□□□ -0.08
SNRNP48-201ENST00000342415 ZSWIM4Q9H7M6 989 aa14.54□□□□□ -0.08
SNRNP48-201ENST00000342415 RIOK3O14730 519 aaKnown RBP14.54□□□□□ -0.08
SNRNP48-201ENST00000342415 U2AF2P26368 475 aaKnown RBP eCLIP14.54□□□□□ -0.083e-6■■■□□ 19.1
SNRNP48-201ENST00000342415 CDC37L1Q7L3B6 337 aa14.54□□□□□ -0.08
SNRNP48-201ENST00000342415 HOOK1Q9UJC3 728 aaKnown RBP14.54□□□□□ -0.08
SNRNP48-201ENST00000342415 CEP135Q66GS9 1140 aa14.54□□□□□ -0.08
SNRNP48-201ENST00000342415 U3KPZ7 1027 aaPredicted RBP14.54□□□□□ -0.08
SNRNP48-201ENST00000342415 LRMPQ12912 555 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms