RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 BCL2L13Q9BXK5 485 aa17.02■□□□□ 0.31
TUBD1-202ENST00000340993 NUP98P52948 1817 aa17.01■□□□□ 0.31
TUBD1-202ENST00000340993 UTRNP46939 3433 aa17.01■□□□□ 0.31
TUBD1-202ENST00000340993 CCDC24Q8N4L8 307 aa17.01■□□□□ 0.31
TUBD1-202ENST00000340993 WWC3Q9ULE0 1092 aa17.01■□□□□ 0.31
TUBD1-202ENST00000340993 HOXB7P09629 217 aa17■□□□□ 0.31
TUBD1-202ENST00000340993 CCDC30Q5VVM6 783 aa17■□□□□ 0.31
TUBD1-202ENST00000340993 TBC1D9BQ66K14 1250 aa17■□□□□ 0.31
TUBD1-202ENST00000340993 DDX21Q9NR30 783 aaKnown RBP eCLIP17■□□□□ 0.31
TUBD1-202ENST00000340993 VAMP4O75379 141 aa17■□□□□ 0.31
TUBD1-202ENST00000340993 GPTP24298 496 aa17■□□□□ 0.31
TUBD1-202ENST00000340993 STK31Q9BXU1 1019 aa17■□□□□ 0.31
TUBD1-202ENST00000340993 DBF4Q9UBU7 674 aaPredicted RBP17■□□□□ 0.31
TUBD1-202ENST00000340993 ZBED9Q6R2W3 1325 aa16.99■□□□□ 0.31
TUBD1-202ENST00000340993 G2E3Q7L622 706 aa16.99■□□□□ 0.31
TUBD1-202ENST00000340993 LRP10Q7Z4F1 713 aa16.99■□□□□ 0.31
TUBD1-202ENST00000340993 LRP5O75197 1615 aa16.98■□□□□ 0.31
TUBD1-202ENST00000340993 SLC4A2P04920 1241 aa16.98■□□□□ 0.31
TUBD1-202ENST00000340993 DDR1Q08345 913 aa16.98■□□□□ 0.31
TUBD1-202ENST00000340993 NFIXQ14938 502 aa16.98■□□□□ 0.31
TUBD1-202ENST00000340993 SGIP1Q9BQI5 828 aa16.98■□□□□ 0.31
TUBD1-202ENST00000340993 AFDNP55196 1824 aaKnown RBP16.98■□□□□ 0.31
TUBD1-202ENST00000340993 ERBB4Q15303 1308 aa16.98■□□□□ 0.31
TUBD1-202ENST00000340993 NLGN1Q8N2Q7 840 aa16.97■□□□□ 0.31
TUBD1-202ENST00000340993 MAP3K15Q6ZN16 1313 aa16.97■□□□□ 0.31
TUBD1-202ENST00000340993 NPHP1O15259 732 aa16.97■□□□□ 0.31
TUBD1-202ENST00000340993 PARP3Q9Y6F1 533 aa16.97■□□□□ 0.31
TUBD1-202ENST00000340993 HYPKQ9NX55 129 aa16.96■□□□□ 0.31
TUBD1-202ENST00000340993 NIP7Q9Y221 180 aaKnown RBP eCLIP16.96■□□□□ 0.31
TUBD1-202ENST00000340993 COL24A1Q17RW2 1714 aa16.96■□□□□ 0.31
TUBD1-202ENST00000340993 ARFGEF2Q9Y6D5 1785 aa16.95■□□□□ 0.3
TUBD1-202ENST00000340993 FHDC1Q9C0D6 1143 aaPredicted RBP16.95■□□□□ 0.3
TUBD1-202ENST00000340993 ZNF652Q9Y2D9 606 aa16.94■□□□□ 0.3
TUBD1-202ENST00000340993 POLRMTO00411 1230 aaKnown RBP16.94■□□□□ 0.3
TUBD1-202ENST00000340993 RIC3Q7Z5B4 369 aa16.94■□□□□ 0.3
TUBD1-202ENST00000340993 SETDB2Q96T68 719 aa16.94■□□□□ 0.3
TUBD1-202ENST00000340993 ATP5J2-PTCD1G3V325 749 aa16.93■□□□□ 0.3
TUBD1-202ENST00000340993 TRMT2AQ8IZ69 625 aaKnown RBP16.93■□□□□ 0.3
TUBD1-202ENST00000340993 CACNA1FO60840 1977 aa16.93■□□□□ 0.3
TUBD1-202ENST00000340993 SERPINB2P05120 415 aa16.92■□□□□ 0.3
TUBD1-202ENST00000340993 TM4SF1P30408 202 aa16.92■□□□□ 0.3
TUBD1-202ENST00000340993 FKBP5Q13451 457 aaPredicted RBP16.92■□□□□ 0.3
TUBD1-202ENST00000340993 ANKRD13DQ6ZTN6 518 aa16.92■□□□□ 0.3
TUBD1-202ENST00000340993 NLGN2Q8NFZ4 835 aa16.92■□□□□ 0.3
TUBD1-202ENST00000340993 ANKRD36CQ5JPF3 1778 aa16.92■□□□□ 0.3
TUBD1-202ENST00000340993 N4BP2Q86UW6 1770 aaPredicted RBP16.92■□□□□ 0.3
TUBD1-202ENST00000340993 FLIIQ13045 1269 aa16.92■□□□□ 0.3
TUBD1-202ENST00000340993 RTL5Q5HYW3 569 aaPredicted RBP16.92■□□□□ 0.3
TUBD1-202ENST00000340993 SSH1Q8WYL5 1049 aa16.92■□□□□ 0.3
TUBD1-202ENST00000340993 SMC4Q9NTJ3 1288 aa16.92■□□□□ 0.3
TUBD1-202ENST00000340993 CARMIL3Q8ND23 1372 aa16.91■□□□□ 0.3
TUBD1-202ENST00000340993 NBPF5PQ86XG9 351 aaPredicted RBP16.91■□□□□ 0.3
TUBD1-202ENST00000340993 NUTM1Q86Y26 1132 aa16.91■□□□□ 0.3
TUBD1-202ENST00000340993 MYD88Q99836 296 aa16.91■□□□□ 0.3
TUBD1-202ENST00000340993 UBN2Q6ZU65 1347 aa16.91■□□□□ 0.3
TUBD1-202ENST00000340993 PI4KAP2A4QPH2 592 aa16.9■□□□□ 0.3
TUBD1-202ENST00000340993 F6X3S4 739 aa16.9■□□□□ 0.3
TUBD1-202ENST00000340993 GIGYF2Q6Y7W6 1299 aaKnown RBP16.9■□□□□ 0.3
TUBD1-202ENST00000340993 PELP1Q8IZL8 1130 aaKnown RBP16.9■□□□□ 0.3
TUBD1-202ENST00000340993 PI4KAP1Q8N8J0 262 aa16.9■□□□□ 0.3
TUBD1-202ENST00000340993 MAP3K2Q9Y2U5 619 aa16.9■□□□□ 0.3
TUBD1-202ENST00000340993 ERVV-1B6SEH8 477 aa16.89■□□□□ 0.3
TUBD1-202ENST00000340993 PLBD2Q8NHP8 589 aa16.89■□□□□ 0.3
TUBD1-202ENST00000340993 JARID2Q92833 1246 aaPredicted RBP16.89■□□□□ 0.3
TUBD1-202ENST00000340993 GTF2E1P29083 439 aaPredicted RBP16.89■□□□□ 0.29
TUBD1-202ENST00000340993 CLEC4GQ6UXB4 293 aa16.89■□□□□ 0.29
TUBD1-202ENST00000340993 ADCY9O60503 1353 aa16.88■□□□□ 0.29
TUBD1-202ENST00000340993 SUSD4Q5VX71 490 aa16.88■□□□□ 0.29
TUBD1-202ENST00000340993 MRPL50Q8N5N7 158 aaKnown RBP16.88■□□□□ 0.29
TUBD1-202ENST00000340993 CNBD1Q8NA66 436 aa16.88■□□□□ 0.29
TUBD1-202ENST00000340993 SYT17Q9BSW7 474 aa16.88■□□□□ 0.29
TUBD1-202ENST00000340993 DDX58O95786 925 aaKnown RBP16.87■□□□□ 0.29
TUBD1-202ENST00000340993 PRR5LQ6MZQ0 368 aa16.87■□□□□ 0.29
TUBD1-202ENST00000340993 SLC4A10Q6U841 1118 aa16.87■□□□□ 0.29
TUBD1-202ENST00000340993 SYNE4Q8N205 404 aa16.87■□□□□ 0.29
TUBD1-202ENST00000340993 CHMP4AQ9BY43 222 aa16.87■□□□□ 0.29
TUBD1-202ENST00000340993 CACNA1SQ13698 1873 aa16.87■□□□□ 0.29
TUBD1-202ENST00000340993 ANKRD31Q8N7Z5 1873 aa16.87■□□□□ 0.29
TUBD1-202ENST00000340993 BCAR3O75815 825 aa16.87■□□□□ 0.29
TUBD1-202ENST00000340993 CHRNA5P30532 468 aa16.87■□□□□ 0.29
TUBD1-202ENST00000340993 A0A0G2JLW4 131 aa16.86■□□□□ 0.29
TUBD1-202ENST00000340993 TCIRG1Q13488 830 aa16.86■□□□□ 0.29
TUBD1-202ENST00000340993 CWF19L2Q2TBE0 894 aaKnown RBP16.86■□□□□ 0.29
TUBD1-202ENST00000340993 ZNF34Q8IZ26 560 aa16.86■□□□□ 0.29
TUBD1-202ENST00000340993 RARSP54136 660 aaKnown RBP16.85■□□□□ 0.29
TUBD1-202ENST00000340993 ERFEQ4G0M1 354 aa16.85■□□□□ 0.29
TUBD1-202ENST00000340993 KSR2Q6VAB6 950 aa16.85■□□□□ 0.29
TUBD1-202ENST00000340993 C10orf71Q711Q0 1435 aa16.85■□□□□ 0.29
TUBD1-202ENST00000340993 FRAT1Q92837 279 aaPredicted RBP16.85■□□□□ 0.29
TUBD1-202ENST00000340993 ATP10DQ9P241 1426 aa16.85■□□□□ 0.29
TUBD1-202ENST00000340993 NRXN2Q9P2S2 1712 aa16.85■□□□□ 0.29
TUBD1-202ENST00000340993 ABCC12Q96J65 1359 aa16.84■□□□□ 0.29
TUBD1-202ENST00000340993 ST5P78524 1137 aa16.84■□□□□ 0.29
TUBD1-202ENST00000340993 NLRP10Q86W26 655 aa16.84■□□□□ 0.29
TUBD1-202ENST00000340993 TNRC6CQ9HCJ0 1690 aaKnown RBP16.84■□□□□ 0.29
TUBD1-202ENST00000340993 HSP90AB3PQ58FF7 597 aa16.84■□□□□ 0.29
TUBD1-202ENST00000340993 TRMT112Q9UI30 125 aaKnown RBP16.84■□□□□ 0.29
TUBD1-202ENST00000340993 NOB1Q9ULX3 412 aaKnown RBP16.84■□□□□ 0.29
TUBD1-202ENST00000340993 KIF13BQ9NQT8 1826 aa16.84■□□□□ 0.29
TUBD1-202ENST00000340993 COL11A2P13942 1736 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms