RNA–Protein interactions for RNA: ENST00000335674.1

LCE3A-201, Transcript of late cornified envelope 3A, humanhuman

APPRIS P1 BASIC

Gene LCE3A, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3A-201ENST00000335674 LMNB1P20700 586 aa20.53■□□□□ 0.88
LCE3A-201ENST00000335674 DDX10Q13206 875 aaKnown RBP20.53■□□□□ 0.88
LCE3A-201ENST00000335674 NPHP1O15259 732 aa20.52■□□□□ 0.88
LCE3A-201ENST00000335674 NMRK2Q9NPI5 230 aa20.52■□□□□ 0.88
LCE3A-201ENST00000335674 DICER1Q9UPY3 1922 aaKnown RBP20.52■□□□□ 0.88
LCE3A-201ENST00000335674 TIAM2Q8IVF5 1701 aa20.52■□□□□ 0.88
LCE3A-201ENST00000335674 RASSF7Q02833 373 aa20.51■□□□□ 0.87
LCE3A-201ENST00000335674 STYK1Q6J9G0 422 aa20.51■□□□□ 0.87
LCE3A-201ENST00000335674 NBPF5PQ86XG9 351 aaPredicted RBP20.51■□□□□ 0.87
LCE3A-201ENST00000335674 CNKSR1Q969H4 720 aa20.51■□□□□ 0.87
LCE3A-201ENST00000335674 ZNF622Q969S3 477 aaKnown RBP eCLIP20.51■□□□□ 0.87
LCE3A-201ENST00000335674 BABAM1Q9NWV8 329 aa20.51■□□□□ 0.87
LCE3A-201ENST00000335674 CEP350Q5VT06 3117 aa20.51■□□□□ 0.87
LCE3A-201ENST00000335674 NUP98P52948 1817 aa20.5■□□□□ 0.87
LCE3A-201ENST00000335674 CACNA1SQ13698 1873 aa20.5■□□□□ 0.87
LCE3A-201ENST00000335674 SRGNP10124 158 aa20.5■□□□□ 0.87
LCE3A-201ENST00000335674 LMOD3Q0VAK6 560 aa20.5■□□□□ 0.87
LCE3A-201ENST00000335674 THUMPD2Q9BTF0 503 aaKnown RBP20.5■□□□□ 0.87
LCE3A-201ENST00000335674 SLX4Q8IY92 1834 aa20.5■□□□□ 0.87
LCE3A-201ENST00000335674 ERBB4Q15303 1308 aa20.5■□□□□ 0.87
LCE3A-201ENST00000335674 KLRG2A4D1S0 409 aaPredicted RBP20.49■□□□□ 0.87
LCE3A-201ENST00000335674 ERVV-1B6SEH8 477 aa20.49■□□□□ 0.87
LCE3A-201ENST00000335674 NFKBIEO00221 500 aa20.49■□□□□ 0.87
LCE3A-201ENST00000335674 TPTE2Q6XPS3 522 aa20.49■□□□□ 0.87
LCE3A-201ENST00000335674 CCDC24Q8N4L8 307 aa20.49■□□□□ 0.87
LCE3A-201ENST00000335674 MASTLQ96GX5 879 aa20.49■□□□□ 0.87
LCE3A-201ENST00000335674 NIP7Q9Y221 180 aaKnown RBP eCLIP20.49■□□□□ 0.87
LCE3A-201ENST00000335674 LTBP3Q9NS15 1303 aa20.49■□□□□ 0.87
LCE3A-201ENST00000335674 TMPOP42166 694 aaKnown RBP20.48■□□□□ 0.87
LCE3A-201ENST00000335674 RIPK4P57078 832 aa20.48■□□□□ 0.87
LCE3A-201ENST00000335674 SOGA3Q5TF21 947 aa20.48■□□□□ 0.87
LCE3A-201ENST00000335674 RBM46Q8TBY0 533 aaKnown RBP20.48■□□□□ 0.87
LCE3A-201ENST00000335674 PRELPP51888 382 aa20.47■□□□□ 0.87
LCE3A-201ENST00000335674 HLFQ16534 295 aa20.46■□□□□ 0.87
LCE3A-201ENST00000335674 TSPYL4Q9UJ04 414 aa20.46■□□□□ 0.87
LCE3A-201ENST00000335674 MAP3K15Q6ZN16 1313 aa20.46■□□□□ 0.87
LCE3A-201ENST00000335674 IBTKQ9P2D0 1353 aaPredicted RBP20.46■□□□□ 0.87
LCE3A-201ENST00000335674 GLTPD2A6NH11 291 aa20.45■□□□□ 0.86
LCE3A-201ENST00000335674 C21orf2O43822 256 aa20.45■□□□□ 0.86
LCE3A-201ENST00000335674 PRPF40BQ6NWY9 871 aaKnown RBP20.45■□□□□ 0.86
LCE3A-201ENST00000335674 NPR1P16066 1061 aa20.44■□□□□ 0.86
LCE3A-201ENST00000335674 KIF6Q6ZMV9 814 aa20.44■□□□□ 0.86
LCE3A-201ENST00000335674 C16orf71Q8IYS4 520 aaPredicted RBP20.44■□□□□ 0.86
LCE3A-201ENST00000335674 NYXQ9GZU5 481 aa20.44■□□□□ 0.86
LCE3A-201ENST00000335674 RIC1Q4ADV7 1423 aa20.44■□□□□ 0.86
LCE3A-201ENST00000335674 APLP1P51693 650 aa20.43■□□□□ 0.86
LCE3A-201ENST00000335674 FSTL1Q12841 308 aa20.43■□□□□ 0.86
LCE3A-201ENST00000335674 TAOK3Q9H2K8 898 aa20.43■□□□□ 0.86
LCE3A-201ENST00000335674 RRP7AQ9Y3A4 280 aaKnown RBP20.43■□□□□ 0.86
LCE3A-201ENST00000335674 WDR90Q96KV7 1748 aa20.42■□□□□ 0.86
LCE3A-201ENST00000335674 C7orf43Q8WVR3 580 aa20.42■□□□□ 0.86
LCE3A-201ENST00000335674 RUNDC1Q96C34 613 aa20.42■□□□□ 0.86
LCE3A-201ENST00000335674 RRAGCQ9HB90 399 aa20.42■□□□□ 0.86
LCE3A-201ENST00000335674 WDR43Q15061 677 aaKnown RBP eCLIP20.41■□□□□ 0.86
LCE3A-201ENST00000335674 TTLL7Q6ZT98 887 aa20.41■□□□□ 0.86
LCE3A-201ENST00000335674 PRKRIP1Q9H875 184 aaPredicted RBP20.41■□□□□ 0.86
LCE3A-201ENST00000335674 MYL6BP14649 208 aa20.4■□□□□ 0.86
LCE3A-201ENST00000335674 CRY2Q49AN0 593 aa20.4■□□□□ 0.86
LCE3A-201ENST00000335674 LRP10Q7Z4F1 713 aa20.4■□□□□ 0.86
LCE3A-201ENST00000335674 NGEFQ8N5V2 710 aa20.4■□□□□ 0.86
LCE3A-201ENST00000335674 VEGFAP15692 232 aaPredicted RBP20.39■□□□□ 0.85
LCE3A-201ENST00000335674 GTF2E1P29083 439 aaPredicted RBP20.39■□□□□ 0.85
LCE3A-201ENST00000335674 PDIA6Q15084 440 aa20.39■□□□□ 0.85
LCE3A-201ENST00000335674 ERFEQ4G0M1 354 aa20.39■□□□□ 0.85
LCE3A-201ENST00000335674 DPY19L2Q6NUT2 758 aa20.39■□□□□ 0.85
LCE3A-201ENST00000335674 GIGYF2Q6Y7W6 1299 aaKnown RBP20.39■□□□□ 0.85
LCE3A-201ENST00000335674 ZNF219Q9P2Y4 722 aaPredicted RBP20.39■□□□□ 0.85
LCE3A-201ENST00000335674 CHL1O00533 1208 aa20.38■□□□□ 0.85
LCE3A-201ENST00000335674 ALDH1B1P30837 517 aa20.38■□□□□ 0.85
LCE3A-201ENST00000335674 CCDC93Q567U6 631 aa20.38■□□□□ 0.85
LCE3A-201ENST00000335674 CCDC146Q8IYE0 955 aa20.38■□□□□ 0.85
LCE3A-201ENST00000335674 ZNF34Q8IZ26 560 aa20.38■□□□□ 0.85
LCE3A-201ENST00000335674 ABCC12Q96J65 1359 aa20.37■□□□□ 0.85
LCE3A-201ENST00000335674 ANKRD36CQ5JPF3 1778 aa20.37■□□□□ 0.85
LCE3A-201ENST00000335674 UBN2Q6ZU65 1347 aa20.37■□□□□ 0.85
LCE3A-201ENST00000335674 FAM177BA6PVY3 158 aa20.37■□□□□ 0.85
LCE3A-201ENST00000335674 SMC1BQ8NDV3 1235 aa20.37■□□□□ 0.85
LCE3A-201ENST00000335674 ZBTB3Q9H5J0 574 aa20.37■□□□□ 0.85
LCE3A-201ENST00000335674 ADAMTS8Q9UP79 889 aa20.37■□□□□ 0.85
LCE3A-201ENST00000335674 TRIM35Q9UPQ4 493 aa20.37■□□□□ 0.85
LCE3A-201ENST00000335674 PARP10Q53GL7 1025 aa20.36■□□□□ 0.85
LCE3A-201ENST00000335674 EIF2S2P20042 333 aaKnown RBP20.35■□□□□ 0.85
LCE3A-201ENST00000335674 NEUROD2Q15784 382 aa20.35■□□□□ 0.85
LCE3A-201ENST00000335674 RTKN2Q8IZC4 609 aa20.35■□□□□ 0.85
LCE3A-201ENST00000335674 NTSR2O95665 410 aa20.34■□□□□ 0.85
LCE3A-201ENST00000335674 HOXB7P09629 217 aa20.34■□□□□ 0.85
LCE3A-201ENST00000335674 HOXA10P31260 410 aaPredicted RBP20.34■□□□□ 0.85
LCE3A-201ENST00000335674 FKBP4Q02790 459 aaKnown RBP eCLIP20.34■□□□□ 0.85
LCE3A-201ENST00000335674 NUTM1Q86Y26 1132 aa20.34■□□□□ 0.85
LCE3A-201ENST00000335674 SNED1Q8TER0 1413 aa20.34■□□□□ 0.85
LCE3A-201ENST00000335674 RNF123Q5XPI4 1314 aa20.33■□□□□ 0.85
LCE3A-201ENST00000335674 GPTP24298 496 aa20.33■□□□□ 0.85
LCE3A-201ENST00000335674 SUSD4Q5VX71 490 aa20.33■□□□□ 0.85
LCE3A-201ENST00000335674 PPP1R42Q7Z4L9 355 aa20.33■□□□□ 0.85
LCE3A-201ENST00000335674 POTECB2RU33 542 aa20.32■□□□□ 0.84
LCE3A-201ENST00000335674 PROSER3Q2NL68 480 aa20.32■□□□□ 0.84
LCE3A-201ENST00000335674 CC2D2BQ6DHV5 1058 aa20.32■□□□□ 0.84
LCE3A-201ENST00000335674 DNAJC5GQ8N7S2 189 aa20.32■□□□□ 0.84
LCE3A-201ENST00000335674 DDX21Q9NR30 783 aaKnown RBP eCLIP20.32■□□□□ 0.84
LCE3A-201ENST00000335674 SCN4AP35499 1836 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms