RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 SURF6O75683 361 aaKnown RBP16.18■□□□□ 0.18
RC3H2-201ENST00000335387 PDIA4P13667 645 aaKnown RBP16.18■□□□□ 0.18
RC3H2-201ENST00000335387 RILPL2Q969X0 211 aa16.18■□□□□ 0.18
RC3H2-201ENST00000335387 NUP188Q5SRE5 1749 aa16.18■□□□□ 0.18
RC3H2-201ENST00000335387 AFDNP55196 1824 aaKnown RBP16.18■□□□□ 0.18
RC3H2-201ENST00000335387 KSR2Q6VAB6 950 aa16.18■□□□□ 0.18
RC3H2-201ENST00000335387 TMEM94Q12767 1356 aa16.18■□□□□ 0.18
RC3H2-201ENST00000335387 RFX7Q2KHR2 1363 aa16.18■□□□□ 0.18
RC3H2-201ENST00000335387 PI4KAP2A4QPH2 592 aa16.17■□□□□ 0.18
RC3H2-201ENST00000335387 PI4KAP1Q8N8J0 262 aa16.17■□□□□ 0.18
RC3H2-201ENST00000335387 ANP32BQ92688 251 aaKnown RBP16.17■□□□□ 0.18
RC3H2-201ENST00000335387 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.17■□□□□ 0.18
RC3H2-201ENST00000335387 NSFL1CQ9UNZ2 370 aaKnown RBP16.17■□□□□ 0.18
RC3H2-201ENST00000335387 OFD1O75665 1012 aa16.17■□□□□ 0.18
RC3H2-201ENST00000335387 BTBD11A6QL63 1104 aa16.16■□□□□ 0.18
RC3H2-201ENST00000335387 NUTM1Q86Y26 1132 aa16.16■□□□□ 0.18
RC3H2-201ENST00000335387 HYPKQ9NX55 129 aa16.16■□□□□ 0.18
RC3H2-201ENST00000335387 VPS53Q5VIR6 699 aa16.16■□□□□ 0.18
RC3H2-201ENST00000335387 IL1RAPL2Q9NP60 686 aa16.16■□□□□ 0.18
RC3H2-201ENST00000335387 UBAP1LF5GYI3 381 aa16.15■□□□□ 0.18
RC3H2-201ENST00000335387 TPM2P07951 284 aa16.15■□□□□ 0.18
RC3H2-201ENST00000335387 USHBP1Q8N6Y0 703 aa16.15■□□□□ 0.18
RC3H2-201ENST00000335387 SYAP1Q96A49 352 aaPredicted RBP16.15■□□□□ 0.18
RC3H2-201ENST00000335387 ARXQ96QS3 562 aa16.15■□□□□ 0.18
RC3H2-201ENST00000335387 ZSWIM6Q9HCJ5 1215 aa16.15■□□□□ 0.18
RC3H2-201ENST00000335387 MYH15Q9Y2K3 1946 aa16.15■□□□□ 0.18
RC3H2-201ENST00000335387 UVSSAQ2YD98 709 aa16.15■□□□□ 0.18
RC3H2-201ENST00000335387 LIMCH1Q9UPQ0 1083 aa16.15■□□□□ 0.18
RC3H2-201ENST00000335387 KCNQ3O43525 872 aa16.15■□□□□ 0.18
RC3H2-201ENST00000335387 RUFY3Q7L099 469 aa16.15■□□□□ 0.18
RC3H2-201ENST00000335387 PDIA6Q15084 440 aa16.14■□□□□ 0.17
RC3H2-201ENST00000335387 RUFY2Q8WXA3 655 aa16.14■□□□□ 0.17
RC3H2-201ENST00000335387 NECTIN2Q92692 538 aa16.14■□□□□ 0.17
RC3H2-201ENST00000335387 ECHDC1Q9NTX5 307 aa16.14■□□□□ 0.17
RC3H2-201ENST00000335387 RBM27Q9P2N5 1060 aaKnown RBP16.14■□□□□ 0.17
RC3H2-201ENST00000335387 SPEF2Q9C093 1822 aa16.14■□□□□ 0.17
RC3H2-201ENST00000335387 PHF14O94880 888 aa16.14■□□□□ 0.17
RC3H2-201ENST00000335387 NECTIN1Q15223 517 aa16.14■□□□□ 0.17
RC3H2-201ENST00000335387 NUTM2GQ5VZR2 741 aa16.14■□□□□ 0.17
RC3H2-201ENST00000335387 ZNF530Q6P9A1 599 aaPredicted RBP16.14■□□□□ 0.17
RC3H2-201ENST00000335387 LINS1Q8NG48 757 aa16.14■□□□□ 0.17
RC3H2-201ENST00000335387 KAZALD1Q96I82 304 aa16.14■□□□□ 0.17
RC3H2-201ENST00000335387 MED23Q9ULK4 1368 aa16.14■□□□□ 0.17
RC3H2-201ENST00000335387 TJP1Q07157 1748 aa16.14■□□□□ 0.17
RC3H2-201ENST00000335387 KDM6AO15550 1401 aaPredicted RBP16.13■□□□□ 0.17
RC3H2-201ENST00000335387 TICAM2Q86XR7 235 aa16.13■□□□□ 0.17
RC3H2-201ENST00000335387 FAM184AQ8NB25 1140 aa16.13■□□□□ 0.17
RC3H2-201ENST00000335387 EVI5LQ96CN4 794 aa16.13■□□□□ 0.17
RC3H2-201ENST00000335387 ZSCAN31Q96LW9 406 aaPredicted RBP16.13■□□□□ 0.17
RC3H2-201ENST00000335387 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.13■□□□□ 0.17
RC3H2-201ENST00000335387 DCCP43146 1447 aa16.13■□□□□ 0.17
RC3H2-201ENST00000335387 HIP1O00291 1037 aa16.13■□□□□ 0.17
RC3H2-201ENST00000335387 ZSCAN22P10073 491 aaPredicted RBP16.13■□□□□ 0.17
RC3H2-201ENST00000335387 TSGA10IPQ3SY00 556 aa16.13■□□□□ 0.17
RC3H2-201ENST00000335387 RASEFQ8IZ41 740 aa16.13■□□□□ 0.17
RC3H2-201ENST00000335387 SH2B1Q9NRF2 756 aaPredicted RBP16.13■□□□□ 0.17
RC3H2-201ENST00000335387 LETM1O95202 739 aaPredicted RBP16.13■□□□□ 0.17
RC3H2-201ENST00000335387 TEFQ10587 303 aa16.13■□□□□ 0.17
RC3H2-201ENST00000335387 DDX21Q9NR30 783 aaKnown RBP eCLIP16.13■□□□□ 0.172e-15■□□□□ 8.9
RC3H2-201ENST00000335387 GCP02774 474 aa16.12■□□□□ 0.17
RC3H2-201ENST00000335387 AK2P54819 239 aa16.12■□□□□ 0.17
RC3H2-201ENST00000335387 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.12■□□□□ 0.173e-6■■□□□ 11.8
RC3H2-201ENST00000335387 C1orf167Q5SNV9 1468 aa16.12■□□□□ 0.17
RC3H2-201ENST00000335387 DDX60Q8IY21 1712 aaKnown RBP16.12■□□□□ 0.17
RC3H2-201ENST00000335387 CCDC171Q6TFL3 1326 aa16.12■□□□□ 0.17
RC3H2-201ENST00000335387 CLASRPQ8N2M8 674 aaKnown RBP16.11■□□□□ 0.17
RC3H2-201ENST00000335387 ZKSCAN5Q9Y2L8 839 aa16.11■□□□□ 0.17
RC3H2-201ENST00000335387 MAP3K2Q9Y2U5 619 aa16.11■□□□□ 0.17
RC3H2-201ENST00000335387 SYCE3A1L190 88 aa16.11■□□□□ 0.17
RC3H2-201ENST00000335387 LRP10Q7Z4F1 713 aa16.11■□□□□ 0.17
RC3H2-201ENST00000335387 LTV1Q96GA3 475 aaPredicted RBP16.11■□□□□ 0.17
RC3H2-201ENST00000335387 GPATCH3Q96I76 525 aa16.11■□□□□ 0.17
RC3H2-201ENST00000335387 MAP4K1Q92918 833 aa16.1■□□□□ 0.17
RC3H2-201ENST00000335387 UPF3BQ9BZI7 483 aaKnown RBP16.1■□□□□ 0.17
RC3H2-201ENST00000335387 TSPY26PQ9H489 355 aa16.1■□□□□ 0.17
RC3H2-201ENST00000335387 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.1■□□□□ 0.17
RC3H2-201ENST00000335387 USP48Q86UV5 1035 aa16.1■□□□□ 0.17
RC3H2-201ENST00000335387 LAMA4Q16363 1823 aa16.1■□□□□ 0.17
RC3H2-201ENST00000335387 GRM8O00222 908 aa16.1■□□□□ 0.17
RC3H2-201ENST00000335387 PSME1Q06323 249 aa16.1■□□□□ 0.17
RC3H2-201ENST00000335387 CCDC39Q9UFE4 941 aa16.1■□□□□ 0.17
RC3H2-201ENST00000335387 FUCA2Q9BTY2 467 aa16.09■□□□□ 0.17
RC3H2-201ENST00000335387 F13A1P00488 732 aa16.09■□□□□ 0.17
RC3H2-201ENST00000335387 UBE2HP62256 183 aa16.09■□□□□ 0.17
RC3H2-201ENST00000335387 C1orf141Q5JVX7 400 aa16.09■□□□□ 0.17
RC3H2-201ENST00000335387 ANKRD24Q8TF21 1146 aa16.09■□□□□ 0.17
RC3H2-201ENST00000335387 STX6O43752 255 aa16.08■□□□□ 0.17
RC3H2-201ENST00000335387 SASH1O94885 1247 aa16.08■□□□□ 0.17
RC3H2-201ENST00000335387 EIF2S2P20042 333 aaKnown RBP16.08■□□□□ 0.17
RC3H2-201ENST00000335387 PROSER3Q2NL68 480 aa16.08■□□□□ 0.17
RC3H2-201ENST00000335387 CCDC183Q5T5S1 534 aa16.08■□□□□ 0.17
RC3H2-201ENST00000335387 ATP6V1DQ9Y5K8 247 aa16.08■□□□□ 0.17
RC3H2-201ENST00000335387 ERBB3P21860 1342 aa16.08■□□□□ 0.17
RC3H2-201ENST00000335387 SYT1P21579 422 aa16.08■□□□□ 0.16
RC3H2-201ENST00000335387 ST3GAL1Q11201 340 aa16.08■□□□□ 0.16
RC3H2-201ENST00000335387 LRRC59Q96AG4 307 aaKnown RBP16.08■□□□□ 0.16
RC3H2-201ENST00000335387 CHAMP1Q96JM3 812 aa16.08■□□□□ 0.16
RC3H2-201ENST00000335387 RRP9O43818 475 aaKnown RBP16.08■□□□□ 0.16
RC3H2-201ENST00000335387 USPL1Q5W0Q7 1092 aa16.08■□□□□ 0.16
RC3H2-201ENST00000335387 MPRIPQ6WCQ1 1025 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms