RNA–Protein interactions for RNA: ENST00000334983.9

CMTM7-201, Transcript of CKLF like MARVEL transmembrane domain containing 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM7, Length 2,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM7-201ENST00000334983 RTN4Q9NQC3 1192 aaKnown RBP23.25■■□□□ 1.31
CMTM7-201ENST00000334983 KIF1BPQ96EK5 621 aa23.25■■□□□ 1.31
CMTM7-201ENST00000334983 HDAC5Q9UQL6 1122 aa23.25■■□□□ 1.31
CMTM7-201ENST00000334983 TRIM6-TRIM34B2RNG4 842 aa23.24■■□□□ 1.31
CMTM7-201ENST00000334983 SURF6O75683 361 aaKnown RBP23.24■■□□□ 1.31
CMTM7-201ENST00000334983 MTX1Q13505 466 aa23.23■■□□□ 1.31
CMTM7-201ENST00000334983 TSHZ3Q63HK5 1081 aa23.23■■□□□ 1.31
CMTM7-201ENST00000334983 POTEAQ6S8J7 498 aa23.23■■□□□ 1.31
CMTM7-201ENST00000334983 MPRIPQ6WCQ1 1025 aa23.23■■□□□ 1.31
CMTM7-201ENST00000334983 RHPN1Q8TCX5 695 aa23.23■■□□□ 1.31
CMTM7-201ENST00000334983 KCNQ3O43525 872 aa23.23■■□□□ 1.31
CMTM7-201ENST00000334983 ALDH1L1O75891 902 aa23.23■■□□□ 1.31
CMTM7-201ENST00000334983 RILPL2Q969X0 211 aa23.23■■□□□ 1.31
CMTM7-201ENST00000334983 ADCY9O60503 1353 aa23.23■■□□□ 1.31
CMTM7-201ENST00000334983 SRGAP3O43295 1099 aa23.22■■□□□ 1.31
CMTM7-201ENST00000334983 NBPF7P0C2Y1 421 aaPredicted RBP23.22■■□□□ 1.31
CMTM7-201ENST00000334983 GIGYF1O75420 1035 aaPredicted RBP23.21■■□□□ 1.31
CMTM7-201ENST00000334983 KLHL40Q2TBA0 621 aa23.21■■□□□ 1.31
CMTM7-201ENST00000334983 ADAMTS7Q9UKP4 1686 aa23.21■■□□□ 1.31
CMTM7-201ENST00000334983 GRPEL1Q9HAV7 217 aa23.21■■□□□ 1.31
CMTM7-201ENST00000334983 GLI3P10071 1580 aa23.2■■□□□ 1.3
CMTM7-201ENST00000334983 NEK4P51957 841 aa23.2■■□□□ 1.3
CMTM7-201ENST00000334983 THRAP3Q9Y2W1 955 aaKnown RBP23.2■■□□□ 1.3
CMTM7-201ENST00000334983 USP42Q9H9J4 1324 aaKnown RBP23.19■■□□□ 1.3
CMTM7-201ENST00000334983 FAM98CQ17RN3 349 aaKnown RBP23.19■■□□□ 1.3
CMTM7-201ENST00000334983 IL1RAPL2Q9NP60 686 aa23.19■■□□□ 1.3
CMTM7-201ENST00000334983 ANO2Q9NQ90 1003 aa23.19■■□□□ 1.3
CMTM7-201ENST00000334983 KSR2Q6VAB6 950 aa23.18■■□□□ 1.3
CMTM7-201ENST00000334983 PI4K2BQ8TCG2 481 aa23.18■■□□□ 1.3
CMTM7-201ENST00000334983 RBM6P78332 1123 aaKnown RBP23.18■■□□□ 1.3
CMTM7-201ENST00000334983 BARGINQ6ZT62 677 aa23.18■■□□□ 1.3
CMTM7-201ENST00000334983 HYPKQ9NX55 129 aa23.18■■□□□ 1.3
CMTM7-201ENST00000334983 SIPA1L3O60292 1781 aaPredicted RBP23.17■■□□□ 1.3
CMTM7-201ENST00000334983 INTS4Q96HW7 963 aaKnown RBP23.17■■□□□ 1.3
CMTM7-201ENST00000334983 TTC41PQ6P2S7 1318 aa23.17■■□□□ 1.3
CMTM7-201ENST00000334983 CUL4AQ13619 759 aa23.16■■□□□ 1.3
CMTM7-201ENST00000334983 PLEKHG2Q9H7P9 1386 aa23.16■■□□□ 1.3
CMTM7-201ENST00000334983 RXRBP28702 533 aa23.16■■□□□ 1.3
CMTM7-201ENST00000334983 NUTM1Q86Y26 1132 aa23.16■■□□□ 1.3
CMTM7-201ENST00000334983 TMX3Q96JJ7 454 aa23.16■■□□□ 1.3
CMTM7-201ENST00000334983 IL2RBP14784 551 aa23.15■■□□□ 1.3
CMTM7-201ENST00000334983 ZGPATQ8N5A5 531 aaKnown RBP23.15■■□□□ 1.3
CMTM7-201ENST00000334983 CNTROBQ8N137 903 aa23.15■■□□□ 1.3
CMTM7-201ENST00000334983 MAP3K2Q9Y2U5 619 aa23.15■■□□□ 1.3
CMTM7-201ENST00000334983 DDX49Q9Y6V7 483 aaKnown RBP23.15■■□□□ 1.3
CMTM7-201ENST00000334983 DISP2A7MBM2 1401 aa23.14■■□□□ 1.3
CMTM7-201ENST00000334983 MEGF6O75095 1541 aa23.14■■□□□ 1.3
CMTM7-201ENST00000334983 ONECUT3O60422 494 aaPredicted RBP23.14■■□□□ 1.29
CMTM7-201ENST00000334983 HSPA4P34932 840 aa23.14■■□□□ 1.29
CMTM7-201ENST00000334983 RAPGEF4Q8WZA2 1011 aa23.14■■□□□ 1.29
CMTM7-201ENST00000334983 ERC1Q8IUD2 1116 aa23.13■■□□□ 1.29
CMTM7-201ENST00000334983 PALD1Q9ULE6 856 aa23.13■■□□□ 1.29
CMTM7-201ENST00000334983 DDX58O95786 925 aaKnown RBP23.13■■□□□ 1.29
CMTM7-201ENST00000334983 PANK2Q9BZ23 570 aa23.13■■□□□ 1.29
CMTM7-201ENST00000334983 C9orf78Q9NZ63 289 aaPredicted RBP23.13■■□□□ 1.29
CMTM7-201ENST00000334983 UTYO14607 1347 aa23.13■■□□□ 1.29
CMTM7-201ENST00000334983 SGSM2O43147 1006 aa23.12■■□□□ 1.29
CMTM7-201ENST00000334983 ANXA1P04083 346 aa23.12■■□□□ 1.29
CMTM7-201ENST00000334983 LINS1Q8NG48 757 aa23.12■■□□□ 1.29
CMTM7-201ENST00000334983 DDX21Q9NR30 783 aaKnown RBP eCLIP23.12■■□□□ 1.29
CMTM7-201ENST00000334983 LMBRD1Q9NUN5 540 aa23.12■■□□□ 1.29
CMTM7-201ENST00000334983 GLRX3O76003 335 aaKnown RBP23.11■■□□□ 1.29
CMTM7-201ENST00000334983 PKP1Q13835 747 aa23.11■■□□□ 1.29
CMTM7-201ENST00000334983 MCTP1Q6DN14 999 aa23.11■■□□□ 1.29
CMTM7-201ENST00000334983 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.11■■□□□ 1.29
CMTM7-201ENST00000334983 ZDHHC9Q9Y397 364 aa23.11■■□□□ 1.29
CMTM7-201ENST00000334983 AK9Q5TCS8 1911 aa23.11■■□□□ 1.29
CMTM7-201ENST00000334983 TATP17735 454 aaPredicted RBP23.11■■□□□ 1.29
CMTM7-201ENST00000334983 CLASRPQ8N2M8 674 aaKnown RBP23.11■■□□□ 1.29
CMTM7-201ENST00000334983 ARXQ96QS3 562 aa23.11■■□□□ 1.29
CMTM7-201ENST00000334983 CDCA7Q9BWT1 371 aaPredicted RBP23.11■■□□□ 1.29
CMTM7-201ENST00000334983 RAD50Q92878 1312 aa23.1■■□□□ 1.29
CMTM7-201ENST00000334983 A0A0G2JS52 829 aa23.1■■□□□ 1.29
CMTM7-201ENST00000334983 GAS2L3Q86XJ1 694 aa23.1■■□□□ 1.29
CMTM7-201ENST00000334983 SEPT12Q8IYM1 358 aa23.09■■□□□ 1.29
CMTM7-201ENST00000334983 PROSER3Q2NL68 480 aa23.09■■□□□ 1.29
CMTM7-201ENST00000334983 ZNF445P59923 1031 aa23.08■■□□□ 1.28
CMTM7-201ENST00000334983 OS9Q13438 667 aaPredicted RBP23.08■■□□□ 1.28
CMTM7-201ENST00000334983 GPATCH3Q96I76 525 aa23.08■■□□□ 1.28
CMTM7-201ENST00000334983 THSD7AQ9UPZ6 1657 aa23.07■■□□□ 1.28
CMTM7-201ENST00000334983 IL25Q9H293 177 aa23.07■■□□□ 1.28
CMTM7-201ENST00000334983 GRM8O00222 908 aa23.06■■□□□ 1.28
CMTM7-201ENST00000334983 BRD1O95696 1058 aa23.06■■□□□ 1.28
CMTM7-201ENST00000334983 ZNF790Q6PG37 636 aa23.06■■□□□ 1.28
CMTM7-201ENST00000334983 SLC52A2Q9HAB3 445 aa23.06■■□□□ 1.28
CMTM7-201ENST00000334983 ECHDC1Q9NTX5 307 aa23.06■■□□□ 1.28
CMTM7-201ENST00000334983 WNK3Q9BYP7 1800 aa23.06■■□□□ 1.28
CMTM7-201ENST00000334983 EXOC5O00471 708 aa23.06■■□□□ 1.28
CMTM7-201ENST00000334983 PDIA6Q15084 440 aa23.06■■□□□ 1.28
CMTM7-201ENST00000334983 DDB1Q16531 1140 aa23.06■■□□□ 1.28
CMTM7-201ENST00000334983 RUFY2Q8WXA3 655 aa23.06■■□□□ 1.28
CMTM7-201ENST00000334983 LSG1Q9H089 658 aaKnown RBP23.06■■□□□ 1.28
CMTM7-201ENST00000334983 SPG7Q9UQ90 795 aa23.06■■□□□ 1.28
CMTM7-201ENST00000334983 ZCRB1Q8TBF4 217 aaKnown RBP23.05■■□□□ 1.28
CMTM7-201ENST00000334983 SCN11AQ9UI33 1791 aa23.05■■□□□ 1.28
CMTM7-201ENST00000334983 KIAA1211Q6ZU35 1233 aa23.04■■□□□ 1.28
CMTM7-201ENST00000334983 PRAMEF22A3QJZ6 481 aa23.04■■□□□ 1.28
CMTM7-201ENST00000334983 CWF19L2Q2TBE0 894 aaKnown RBP23.04■■□□□ 1.28
CMTM7-201ENST00000334983 PARP4Q9UKK3 1724 aaKnown RBP23.04■■□□□ 1.28
CMTM7-201ENST00000334983 KDM6AO15550 1401 aaPredicted RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms