RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 DDX21Q9NR30 783 aaKnown RBP eCLIP21.16■□□□□ 0.98
C11orf88-201ENST00000332814 CHPF2Q9P2E5 772 aa21.16■□□□□ 0.98
C11orf88-201ENST00000332814 MAP3K15Q6ZN16 1313 aa21.15■□□□□ 0.98
C11orf88-201ENST00000332814 FANCIQ9NVI1 1328 aa21.15■□□□□ 0.98
C11orf88-201ENST00000332814 ANXA1P04083 346 aa21.15■□□□□ 0.98
C11orf88-201ENST00000332814 GOLGA2Q08379 1002 aa21.15■□□□□ 0.98
C11orf88-201ENST00000332814 C8orf58Q8NAV2 365 aa21.15■□□□□ 0.98
C11orf88-201ENST00000332814 ZBTB3Q9H5J0 574 aa21.15■□□□□ 0.98
C11orf88-201ENST00000332814 ERVV-1B6SEH8 477 aa21.14■□□□□ 0.97
C11orf88-201ENST00000332814 AIMP1Q12904 312 aaKnown RBP21.14■□□□□ 0.97
C11orf88-201ENST00000332814 PROSER3Q2NL68 480 aa21.14■□□□□ 0.97
C11orf88-201ENST00000332814 TTLL7Q6ZT98 887 aa21.14■□□□□ 0.97
C11orf88-201ENST00000332814 PDIA6Q15084 440 aa21.13■□□□□ 0.97
C11orf88-201ENST00000332814 GPR162Q16538 588 aa21.13■□□□□ 0.97
C11orf88-201ENST00000332814 CCDC30Q5VVM6 783 aa21.13■□□□□ 0.97
C11orf88-201ENST00000332814 NIP7Q9Y221 180 aaKnown RBP eCLIP21.13■□□□□ 0.97
C11orf88-201ENST00000332814 TGFB2P61812 414 aa21.12■□□□□ 0.97
C11orf88-201ENST00000332814 TWISTNBQ3B726 338 aaPredicted RBP21.12■□□□□ 0.97
C11orf88-201ENST00000332814 COPS6Q7L5N1 327 aa21.12■□□□□ 0.97
C11orf88-201ENST00000332814 CNBD1Q8NA66 436 aa21.12■□□□□ 0.97
C11orf88-201ENST00000332814 XAGE3Q8WTP9 111 aa21.12■□□□□ 0.97
C11orf88-201ENST00000332814 HYPKQ9NX55 129 aa21.12■□□□□ 0.97
C11orf88-201ENST00000332814 HLFQ16534 295 aa21.11■□□□□ 0.97
C11orf88-201ENST00000332814 NBPF5PQ86XG9 351 aaPredicted RBP21.11■□□□□ 0.97
C11orf88-201ENST00000332814 STK31Q9BXU1 1019 aa21.11■□□□□ 0.97
C11orf88-201ENST00000332814 ST5P78524 1137 aa21.1■□□□□ 0.97
C11orf88-201ENST00000332814 TSPYL6Q8N831 410 aa21.1■□□□□ 0.97
C11orf88-201ENST00000332814 PXDNLA1KZ92 1463 aa21.09■□□□□ 0.97
C11orf88-201ENST00000332814 LRP10Q7Z4F1 713 aa21.09■□□□□ 0.97
C11orf88-201ENST00000332814 ZNF521Q96K83 1311 aa21.08■□□□□ 0.97
C11orf88-201ENST00000332814 FAM177BA6PVY3 158 aa21.08■□□□□ 0.97
C11orf88-201ENST00000332814 GTF2E1P29083 439 aaPredicted RBP21.08■□□□□ 0.97
C11orf88-201ENST00000332814 EXOSC9Q06265 439 aaKnown RBP21.08■□□□□ 0.97
C11orf88-201ENST00000332814 HSP90AB3PQ58FF7 597 aa21.08■□□□□ 0.97
C11orf88-201ENST00000332814 GIGYF2Q6Y7W6 1299 aaKnown RBP21.08■□□□□ 0.97
C11orf88-201ENST00000332814 ATP10DQ9P241 1426 aa21.08■□□□□ 0.97
C11orf88-201ENST00000332814 KIF13BQ9NQT8 1826 aa21.07■□□□□ 0.96
C11orf88-201ENST00000332814 PRR5LQ6MZQ0 368 aa21.07■□□□□ 0.96
C11orf88-201ENST00000332814 TPTE2Q6XPS3 522 aa21.07■□□□□ 0.96
C11orf88-201ENST00000332814 WWC3Q9ULE0 1092 aa21.07■□□□□ 0.96
C11orf88-201ENST00000332814 NRXN2Q9P2S2 1712 aa21.07■□□□□ 0.96
C11orf88-201ENST00000332814 A0A0G2JLW4 131 aa21.06■□□□□ 0.96
C11orf88-201ENST00000332814 E9PSI1 815 aa21.06■□□□□ 0.96
C11orf88-201ENST00000332814 DPEP1P16444 411 aa21.06■□□□□ 0.96
C11orf88-201ENST00000332814 GPTP24298 496 aa21.06■□□□□ 0.96
C11orf88-201ENST00000332814 NYXQ9GZU5 481 aa21.06■□□□□ 0.96
C11orf88-201ENST00000332814 SPINK5Q9NQ38 1064 aaPredicted RBP21.06■□□□□ 0.96
C11orf88-201ENST00000332814 PDE6BP35913 854 aa21.05■□□□□ 0.96
C11orf88-201ENST00000332814 ANKRD13DQ6ZTN6 518 aa21.05■□□□□ 0.96
C11orf88-201ENST00000332814 PLBD2Q8NHP8 589 aa21.05■□□□□ 0.96
C11orf88-201ENST00000332814 AFDNP55196 1824 aaKnown RBP21.05■□□□□ 0.96
C11orf88-201ENST00000332814 DDX58O95786 925 aaKnown RBP21.04■□□□□ 0.96
C11orf88-201ENST00000332814 RIC3Q7Z5B4 369 aa21.04■□□□□ 0.96
C11orf88-201ENST00000332814 CCDC24Q8N4L8 307 aa21.04■□□□□ 0.96
C11orf88-201ENST00000332814 PDZRN3Q9UPQ7 1066 aa21.04■□□□□ 0.96
C11orf88-201ENST00000332814 H0YIN7 160 aa21.03■□□□□ 0.96
C11orf88-201ENST00000332814 TCERG1O14776 1098 aaKnown RBP21.03■□□□□ 0.96
C11orf88-201ENST00000332814 GRIN3BO60391 1043 aa21.03■□□□□ 0.96
C11orf88-201ENST00000332814 CHRNA5P30532 468 aa21.03■□□□□ 0.96
C11orf88-201ENST00000332814 PARP10Q53GL7 1025 aa21.03■□□□□ 0.96
C11orf88-201ENST00000332814 PPP1R42Q7Z4L9 355 aa21.03■□□□□ 0.96
C11orf88-201ENST00000332814 C2CD5Q86YS7 1000 aa21.03■□□□□ 0.96
C11orf88-201ENST00000332814 BRIP1Q9BX63 1249 aa21.03■□□□□ 0.96
C11orf88-201ENST00000332814 PIM2Q9P1W9 311 aa21.03■□□□□ 0.96
C11orf88-201ENST00000332814 BCS1LQ9Y276 419 aa21.03■□□□□ 0.96
C11orf88-201ENST00000332814 ZNF34Q8IZ26 560 aa21.02■□□□□ 0.96
C11orf88-201ENST00000332814 PHAXQ9H814 394 aaKnown RBP21.02■□□□□ 0.96
C11orf88-201ENST00000332814 IBTKQ9P2D0 1353 aaPredicted RBP21.01■□□□□ 0.95
C11orf88-201ENST00000332814 N4BP2Q86UW6 1770 aaPredicted RBP21.01■□□□□ 0.95
C11orf88-201ENST00000332814 HNRNPUQ00839 825 aaKnown RBP eCLIP21.01■□□□□ 0.95
C11orf88-201ENST00000332814 NUP98P52948 1817 aa21.01■□□□□ 0.95
C11orf88-201ENST00000332814 UBN2Q6ZU65 1347 aa21.01■□□□□ 0.95
C11orf88-201ENST00000332814 KIAA1551Q9HCM1 1747 aa21.01■□□□□ 0.95
C11orf88-201ENST00000332814 VAMP4O75379 141 aa21■□□□□ 0.95
C11orf88-201ENST00000332814 SLC4A2P04920 1241 aa21■□□□□ 0.95
C11orf88-201ENST00000332814 YBX3P16989 372 aaKnown RBP eCLIP21■□□□□ 0.95
C11orf88-201ENST00000332814 TCIRG1Q13488 830 aa21■□□□□ 0.95
C11orf88-201ENST00000332814 SLFN5Q08AF3 891 aa20.99■□□□□ 0.95
C11orf88-201ENST00000332814 DALRD3Q5D0E6 543 aaKnown RBP20.99■□□□□ 0.95
C11orf88-201ENST00000332814 SUSD4Q5VX71 490 aa20.99■□□□□ 0.95
C11orf88-201ENST00000332814 UTP14AQ9BVJ6 771 aaKnown RBP20.99■□□□□ 0.95
C11orf88-201ENST00000332814 NUTM1Q86Y26 1132 aa20.98■□□□□ 0.95
C11orf88-201ENST00000332814 ZNF622Q969S3 477 aaKnown RBP eCLIP20.98■□□□□ 0.95
C11orf88-201ENST00000332814 ANKRD36CQ5JPF3 1778 aa20.96■□□□□ 0.95
C11orf88-201ENST00000332814 NTSR2O95665 410 aa20.96■□□□□ 0.95
C11orf88-201ENST00000332814 KCNA3P22001 575 aa20.96■□□□□ 0.95
C11orf88-201ENST00000332814 ERFEQ4G0M1 354 aa20.96■□□□□ 0.95
C11orf88-201ENST00000332814 NLRP10Q86W26 655 aa20.96■□□□□ 0.95
C11orf88-201ENST00000332814 CDCA7LQ96GN5 454 aa20.96■□□□□ 0.95
C11orf88-201ENST00000332814 TRMT112Q9UI30 125 aaKnown RBP20.96■□□□□ 0.95
C11orf88-201ENST00000332814 RNF123Q5XPI4 1314 aa20.96■□□□□ 0.95
C11orf88-201ENST00000332814 ATP5J2-PTCD1G3V325 749 aa20.95■□□□□ 0.94
C11orf88-201ENST00000332814 FKBP5Q13451 457 aaPredicted RBP20.95■□□□□ 0.94
C11orf88-201ENST00000332814 TTLL6Q8N841 843 aa20.95■□□□□ 0.94
C11orf88-201ENST00000332814 MYD88Q99836 296 aa20.95■□□□□ 0.94
C11orf88-201ENST00000332814 ARFGEF2Q9Y6D5 1785 aa20.95■□□□□ 0.94
C11orf88-201ENST00000332814 NEXNQ0ZGT2 675 aa20.94■□□□□ 0.94
C11orf88-201ENST00000332814 FLIIQ13045 1269 aa20.94■□□□□ 0.94
C11orf88-201ENST00000332814 KSR2Q6VAB6 950 aa20.94■□□□□ 0.94
C11orf88-201ENST00000332814 MASTLQ96GX5 879 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms