RNA–Protein interactions for RNA: ENST00000328596.10

TNFRSF18-201, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TNFRSF18, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-201ENST00000328596 DALRD3Q5D0E6 543 aaKnown RBP27.29■■□□□ 1.96
TNFRSF18-201ENST00000328596 KIF6Q6ZMV9 814 aa27.29■■□□□ 1.96
TNFRSF18-201ENST00000328596 CNBD1Q8NA66 436 aa27.29■■□□□ 1.96
TNFRSF18-201ENST00000328596 MAP3K15Q6ZN16 1313 aa27.28■■□□□ 1.96
TNFRSF18-201ENST00000328596 NPHP1O15259 732 aa27.28■■□□□ 1.96
TNFRSF18-201ENST00000328596 ZNF853P0CG23 659 aa27.28■■□□□ 1.96
TNFRSF18-201ENST00000328596 PDIA6Q15084 440 aa27.28■■□□□ 1.96
TNFRSF18-201ENST00000328596 TTLL7Q6ZT98 887 aa27.28■■□□□ 1.96
TNFRSF18-201ENST00000328596 BRIP1Q9BX63 1249 aa27.28■■□□□ 1.96
TNFRSF18-201ENST00000328596 MBIPQ9NS73 344 aa27.28■■□□□ 1.96
TNFRSF18-201ENST00000328596 IFT57Q9NWB7 429 aa27.28■■□□□ 1.96
TNFRSF18-201ENST00000328596 NIP7Q9Y221 180 aaKnown RBP eCLIP27.28■■□□□ 1.96
TNFRSF18-201ENST00000328596 C2CD5Q86YS7 1000 aa27.27■■□□□ 1.96
TNFRSF18-201ENST00000328596 H0YIN7 160 aa27.26■■□□□ 1.95
TNFRSF18-201ENST00000328596 GNAI1P63096 354 aa27.26■■□□□ 1.95
TNFRSF18-201ENST00000328596 ST5P78524 1137 aa27.26■■□□□ 1.95
TNFRSF18-201ENST00000328596 LRP10Q7Z4F1 713 aa27.26■■□□□ 1.95
TNFRSF18-201ENST00000328596 NBPF5PQ86XG9 351 aaPredicted RBP27.26■■□□□ 1.95
TNFRSF18-201ENST00000328596 CCDC24Q8N4L8 307 aa27.26■■□□□ 1.95
TNFRSF18-201ENST00000328596 PDZRN3Q9UPQ7 1066 aa27.26■■□□□ 1.95
TNFRSF18-201ENST00000328596 HOXB7P09629 217 aa27.25■■□□□ 1.95
TNFRSF18-201ENST00000328596 PDE6BP35913 854 aa27.25■■□□□ 1.95
TNFRSF18-201ENST00000328596 NECTIN2Q92692 538 aa27.25■■□□□ 1.95
TNFRSF18-201ENST00000328596 ARFGEF1Q9Y6D6 1849 aa27.25■■□□□ 1.95
TNFRSF18-201ENST00000328596 ANKRD31Q8N7Z5 1873 aa27.24■■□□□ 1.95
TNFRSF18-201ENST00000328596 PROSER3Q2NL68 480 aa27.24■■□□□ 1.95
TNFRSF18-201ENST00000328596 ANXA1P04083 346 aa27.23■■□□□ 1.95
TNFRSF18-201ENST00000328596 CCDC27Q2M243 656 aa27.23■■□□□ 1.95
TNFRSF18-201ENST00000328596 ARHGAP27Q6ZUM4 889 aa27.23■■□□□ 1.95
TNFRSF18-201ENST00000328596 ZBTB3Q9H5J0 574 aa27.23■■□□□ 1.95
TNFRSF18-201ENST00000328596 DLEC1Q9Y238 1755 aa27.22■■□□□ 1.95
TNFRSF18-201ENST00000328596 TPTE2Q6XPS3 522 aa27.22■■□□□ 1.95
TNFRSF18-201ENST00000328596 NUP98P52948 1817 aa27.21■■□□□ 1.95
TNFRSF18-201ENST00000328596 HDGFL1Q5TGJ6 251 aa27.21■■□□□ 1.95
TNFRSF18-201ENST00000328596 DUSP27Q5VZP5 1158 aa27.21■■□□□ 1.95
TNFRSF18-201ENST00000328596 DDX21Q9NR30 783 aaKnown RBP eCLIP27.21■■□□□ 1.95
TNFRSF18-201ENST00000328596 ATP10DQ9P241 1426 aa27.21■■□□□ 1.95
TNFRSF18-201ENST00000328596 SENP3-EIF4A1A0A087X0R7 540 aa27.2■■□□□ 1.94
TNFRSF18-201ENST00000328596 NCBP3Q53F19 620 aaKnown RBP27.2■■□□□ 1.94
TNFRSF18-201ENST00000328596 TTLL6Q8N841 843 aa27.2■■□□□ 1.94
TNFRSF18-201ENST00000328596 GIGYF2Q6Y7W6 1299 aaKnown RBP27.19■■□□□ 1.94
TNFRSF18-201ENST00000328596 WWC1Q8IX03 1113 aa27.19■■□□□ 1.94
TNFRSF18-201ENST00000328596 FAM177BA6PVY3 158 aa27.18■■□□□ 1.94
TNFRSF18-201ENST00000328596 ZNF622Q969S3 477 aaKnown RBP eCLIP27.18■■□□□ 1.94
TNFRSF18-201ENST00000328596 CHPF2Q9P2E5 772 aa27.18■■□□□ 1.94
TNFRSF18-201ENST00000328596 COPS6Q7L5N1 327 aa27.17■■□□□ 1.94
TNFRSF18-201ENST00000328596 XAGE3Q8WTP9 111 aa27.17■■□□□ 1.94
TNFRSF18-201ENST00000328596 ADCY9O60503 1353 aa27.17■■□□□ 1.94
TNFRSF18-201ENST00000328596 GPTP24298 496 aa27.16■■□□□ 1.94
TNFRSF18-201ENST00000328596 AIMP1Q12904 312 aaKnown RBP27.16■■□□□ 1.94
TNFRSF18-201ENST00000328596 ZNF34Q8IZ26 560 aa27.16■■□□□ 1.94
TNFRSF18-201ENST00000328596 NYXQ9GZU5 481 aa27.16■■□□□ 1.94
TNFRSF18-201ENST00000328596 DBF4Q9UBU7 674 aaPredicted RBP27.16■■□□□ 1.94
TNFRSF18-201ENST00000328596 COL11A2P13942 1736 aaPredicted RBP27.16■■□□□ 1.94
TNFRSF18-201ENST00000328596 GTF2E1P29083 439 aaPredicted RBP27.15■■□□□ 1.94
TNFRSF18-201ENST00000328596 FAM9BQ8IZU0 186 aa27.15■■□□□ 1.94
TNFRSF18-201ENST00000328596 UBN2Q6ZU65 1347 aa27.15■■□□□ 1.94
TNFRSF18-201ENST00000328596 SRGNP10124 158 aa27.14■■□□□ 1.94
TNFRSF18-201ENST00000328596 STYK1Q6J9G0 422 aa27.14■■□□□ 1.94
TNFRSF18-201ENST00000328596 IBTKQ9P2D0 1353 aaPredicted RBP27.13■■□□□ 1.93
TNFRSF18-201ENST00000328596 KLRG2A4D1S0 409 aaPredicted RBP27.13■■□□□ 1.93
TNFRSF18-201ENST00000328596 DIEXFQ68CQ4 756 aaKnown RBP27.13■■□□□ 1.93
TNFRSF18-201ENST00000328596 MASTLQ96GX5 879 aa27.13■■□□□ 1.93
TNFRSF18-201ENST00000328596 ELL2O00472 640 aaPredicted RBP27.12■■□□□ 1.93
TNFRSF18-201ENST00000328596 C8orf58Q8NAV2 365 aa27.12■■□□□ 1.93
TNFRSF18-201ENST00000328596 CNKSR1Q969H4 720 aa27.12■■□□□ 1.93
TNFRSF18-201ENST00000328596 IL16Q14005 1332 aa27.12■■□□□ 1.93
TNFRSF18-201ENST00000328596 PARP10Q53GL7 1025 aa27.11■■□□□ 1.93
TNFRSF18-201ENST00000328596 SUSD4Q5VX71 490 aa27.11■■□□□ 1.93
TNFRSF18-201ENST00000328596 NUTM1Q86Y26 1132 aa27.11■■□□□ 1.93
TNFRSF18-201ENST00000328596 HYPKQ9NX55 129 aa27.11■■□□□ 1.93
TNFRSF18-201ENST00000328596 HSP90AB3PQ58FF7 597 aa27.1■■□□□ 1.93
TNFRSF18-201ENST00000328596 TSR2Q969E8 191 aaKnown RBP27.1■■□□□ 1.93
TNFRSF18-201ENST00000328596 NPR1P16066 1061 aa27.09■■□□□ 1.93
TNFRSF18-201ENST00000328596 ERFEQ4G0M1 354 aa27.09■■□□□ 1.93
TNFRSF18-201ENST00000328596 PPP1R42Q7Z4L9 355 aa27.09■■□□□ 1.93
TNFRSF18-201ENST00000328596 SALL2Q9Y467 1007 aaPredicted RBP27.09■■□□□ 1.93
TNFRSF18-201ENST00000328596 ABCC12Q96J65 1359 aa27.09■■□□□ 1.93
TNFRSF18-201ENST00000328596 NTSR2O95665 410 aa27.08■■□□□ 1.93
TNFRSF18-201ENST00000328596 C9orf131Q5VYM1 1079 aa27.08■■□□□ 1.93
TNFRSF18-201ENST00000328596 CHMP4AQ9BY43 222 aa27.08■■□□□ 1.93
TNFRSF18-201ENST00000328596 TCIRG1Q13488 830 aa27.07■■□□□ 1.92
TNFRSF18-201ENST00000328596 PRPF40BQ6NWY9 871 aaKnown RBP27.07■■□□□ 1.92
TNFRSF18-201ENST00000328596 WDR63Q8IWG1 891 aa27.07■■□□□ 1.92
TNFRSF18-201ENST00000328596 PLBD2Q8NHP8 589 aa27.07■■□□□ 1.92
TNFRSF18-201ENST00000328596 C21orf2O43822 256 aa27.06■■□□□ 1.92
TNFRSF18-201ENST00000328596 ANKRD13DQ6ZTN6 518 aa27.06■■□□□ 1.92
TNFRSF18-201ENST00000328596 TSPYL6Q8N831 410 aa27.06■■□□□ 1.92
TNFRSF18-201ENST00000328596 RASSF7Q02833 373 aa27.05■■□□□ 1.92
TNFRSF18-201ENST00000328596 UTP14AQ9BVJ6 771 aaKnown RBP27.05■■□□□ 1.92
TNFRSF18-201ENST00000328596 GPBP1L1Q9HC44 474 aaPredicted RBP27.05■■□□□ 1.92
TNFRSF18-201ENST00000328596 ZNF219Q9P2Y4 722 aaPredicted RBP27.05■■□□□ 1.92
TNFRSF18-201ENST00000328596 RIC1Q4ADV7 1423 aa27.05■■□□□ 1.92
TNFRSF18-201ENST00000328596 ANKRD36CQ5JPF3 1778 aa27.04■■□□□ 1.92
TNFRSF18-201ENST00000328596 SLX4Q8IY92 1834 aa27.04■■□□□ 1.92
TNFRSF18-201ENST00000328596 CRY2Q49AN0 593 aa27.04■■□□□ 1.92
TNFRSF18-201ENST00000328596 CCDC30Q5VVM6 783 aa27.04■■□□□ 1.92
TNFRSF18-201ENST00000328596 ZNF526Q8TF50 670 aaPredicted RBP27.04■■□□□ 1.92
TNFRSF18-201ENST00000328596 RNF181Q9P0P0 153 aa27.04■■□□□ 1.92
TNFRSF18-201ENST00000328596 SBF1O95248 1867 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms