RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 SYTL4Q96C24 671 aaPredicted RBP7.28□□□□□ -1.24
SSH1-202ENST00000326495 BCCIPQ9P287 314 aaKnown RBP eCLIP7.28□□□□□ -1.24
SSH1-202ENST00000326495 MRVI1Q9Y6F6 885 aa7.28□□□□□ -1.24
SSH1-202ENST00000326495 TTF1Q15361 905 aaPredicted RBP7.28□□□□□ -1.24
SSH1-202ENST00000326495 CCDC14Q49A88 953 aa7.28□□□□□ -1.24
SSH1-202ENST00000326495 NAP1L3Q99457 506 aaPredicted RBP7.28□□□□□ -1.24
SSH1-202ENST00000326495 RASAL2Q9UJF2 1139 aa7.28□□□□□ -1.24
SSH1-202ENST00000326495 ANKRD62A6NC57 917 aa7.28□□□□□ -1.24
SSH1-202ENST00000326495 TNNT1P13805 278 aa7.28□□□□□ -1.24
SSH1-202ENST00000326495 PRKAR2BP31323 418 aa7.27□□□□□ -1.24
SSH1-202ENST00000326495 ACTN2P35609 894 aa7.27□□□□□ -1.24
SSH1-202ENST00000326495 CDCA7LQ96GN5 454 aa7.27□□□□□ -1.24
SSH1-202ENST00000326495 KIF3CO14782 793 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 KCNH5Q8NCM2 988 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 PIBF1Q8WXW3 757 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 PUS7Q96PZ0 661 aaKnown RBP7.27□□□□□ -1.25
SSH1-202ENST00000326495 SLC4A2P04920 1241 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 AMOTQ4VCS5 1084 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 CTCFLQ8NI51 663 aaPredicted RBP7.27□□□□□ -1.25
SSH1-202ENST00000326495 ARFGAP3Q9NP61 516 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 TTC21BQ7Z4L5 1316 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 CCDC77Q9BR77 488 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 SEC63Q9UGP8 760 aaKnown RBP7.27□□□□□ -1.25
SSH1-202ENST00000326495 LIMCH1Q9UPQ0 1083 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 B4DLN1 442 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 ATF3P18847 181 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 MRPL12P52815 198 aaKnown RBP7.27□□□□□ -1.25
SSH1-202ENST00000326495 KLHL40Q2TBA0 621 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 KIF4BQ2VIQ3 1234 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 CEP135Q66GS9 1140 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 CEP112Q8N8E3 955 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 NCOA1Q15788 1441 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 ASXL1Q8IXJ9 1541 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 OPA1O60313 960 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 EXOSC9Q06265 439 aaKnown RBP7.27□□□□□ -1.25
SSH1-202ENST00000326495 BMP2KLQ5H9B9 411 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 SKIDA1Q1XH10 827 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 AACSQ86V21 672 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 TSGA10Q9BZW7 698 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 MAP4K4O95819 1239 aaPredicted RBP7.27□□□□□ -1.25
SSH1-202ENST00000326495 ZC3H15Q8WU90 426 aaKnown RBP7.27□□□□□ -1.25
SSH1-202ENST00000326495 ALDH3A1P30838 453 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 TMEM132AQ24JP5 1023 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 BICDL1Q6ZP65 573 aa7.27□□□□□ -1.25
SSH1-202ENST00000326495 SLFN5Q08AF3 891 aa7.26□□□□□ -1.25
SSH1-202ENST00000326495 LMBR1Q8WVP7 490 aa7.26□□□□□ -1.25
SSH1-202ENST00000326495 GCC2Q8IWJ2 1684 aa7.26□□□□□ -1.25
SSH1-202ENST00000326495 MPHOSPH10O00566 681 aaKnown RBP7.26□□□□□ -1.25
SSH1-202ENST00000326495 HSPA4P34932 840 aa7.26□□□□□ -1.25
SSH1-202ENST00000326495 IKQ13123 557 aaPredicted RBP7.26□□□□□ -1.25
SSH1-202ENST00000326495 SNW1Q13573 536 aaKnown RBP7.26□□□□□ -1.25
SSH1-202ENST00000326495 SMARCC1Q92922 1105 aaPredicted RBP7.26□□□□□ -1.25
SSH1-202ENST00000326495 MYH6P13533 1939 aa7.26□□□□□ -1.25
SSH1-202ENST00000326495 SPATS2Q86XZ4 545 aaKnown RBP7.26□□□□□ -1.25
SSH1-202ENST00000326495 SELENOOQ9BVL4 669 aa7.26□□□□□ -1.25
SSH1-202ENST00000326495 NLRP2Q9NX02 1062 aa7.26□□□□□ -1.25
SSH1-202ENST00000326495 BCAP29Q9UHQ4 241 aa7.26□□□□□ -1.25
SSH1-202ENST00000326495 SPG7Q9UQ90 795 aa7.26□□□□□ -1.25
SSH1-202ENST00000326495 CCDC6Q16204 474 aa7.26□□□□□ -1.25
SSH1-202ENST00000326495 TNPO1Q92973 898 aaKnown RBP7.26□□□□□ -1.25
SSH1-202ENST00000326495 KCNG1Q9UIX4 513 aa7.26□□□□□ -1.25
SSH1-202ENST00000326495 TEX13AQ9BXU3 409 aaPredicted RBP7.26□□□□□ -1.25
SSH1-202ENST00000326495 MICAL3Q7RTP6 2002 aa7.26□□□□□ -1.25
SSH1-202ENST00000326495 B4GALNT4Q76KP1 1039 aa7.26□□□□□ -1.25
SSH1-202ENST00000326495 MSANTD4Q8NCY6 345 aa7.26□□□□□ -1.25
SSH1-202ENST00000326495 C16orf45Q96MC5 204 aaPredicted RBP7.26□□□□□ -1.25
SSH1-202ENST00000326495 CEP63Q96MT8 703 aa7.26□□□□□ -1.25
SSH1-202ENST00000326495 GLT8D2Q9H1C3 349 aa7.26□□□□□ -1.25
SSH1-202ENST00000326495 NUP88Q99567 741 aaPredicted RBP7.26□□□□□ -1.25
SSH1-202ENST00000326495 ARHGEF12Q9NZN5 1544 aa7.26□□□□□ -1.25
SSH1-202ENST00000326495 ADCY5O95622 1261 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 PRXQ9BXM0 1461 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 MX1P20591 662 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 CWC27Q6UX04 472 aaKnown RBP7.25□□□□□ -1.25
SSH1-202ENST00000326495 CCDC155Q8N6L0 562 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 NT5C2P49902 561 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 ZFYP08048 801 aaPredicted RBP7.25□□□□□ -1.25
SSH1-202ENST00000326495 GTF2F1P35269 517 aaKnown RBP eCLIP7.25□□□□□ -1.25
SSH1-202ENST00000326495 IRX4P78413 519 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 ERCC6LQ2NKX8 1250 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 PODNQ7Z5L7 613 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 CNNM1Q9NRU3 951 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 GTF2A1P52655 376 aaPredicted RBP7.25□□□□□ -1.25
SSH1-202ENST00000326495 SEPT6Q14141 434 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 TSNARE1Q96NA8 513 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 TBC1D32Q96NH3 1257 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 WDR70Q9NW82 654 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 GNAQP50148 359 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 CBX1P83916 185 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 CFAP157Q5JU67 520 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 MAGI1Q96QZ7 1491 aaPredicted RBP7.25□□□□□ -1.25
SSH1-202ENST00000326495 TOPBP1Q92547 1522 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 MSH5O43196 834 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 HSF2BPO75031 334 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 IQCA1Q86XH1 822 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 MNAT1P51948 309 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 SUDS3Q9H7L9 328 aaPredicted RBP7.25□□□□□ -1.25
SSH1-202ENST00000326495 NSD3Q9BZ95 1437 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 BCAR3O75815 825 aa7.25□□□□□ -1.25
SSH1-202ENST00000326495 DAAM2Q86T65 1068 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms