RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 NOP2P46087 812 aaKnown RBP16.8■□□□□ 0.28
NUP98-201ENST00000324932 KIAA0753Q2KHM9 967 aa16.8■□□□□ 0.28
NUP98-201ENST00000324932 TBC1D32Q96NH3 1257 aa16.8■□□□□ 0.28
NUP98-201ENST00000324932 NKTRP30414 1462 aaKnown RBP16.8■□□□□ 0.28
NUP98-201ENST00000324932 SKILP12757 684 aa16.8■□□□□ 0.28
NUP98-201ENST00000324932 LRPPRCP42704 1394 aaKnown RBP16.8■□□□□ 0.28
NUP98-201ENST00000324932 AKR1B10O60218 316 aa16.8■□□□□ 0.28
NUP98-201ENST00000324932 TUBB4BP68371 445 aa16.8■□□□□ 0.28
NUP98-201ENST00000324932 ZSCAN16Q9H4T2 348 aaPredicted RBP16.8■□□□□ 0.28
NUP98-201ENST00000324932 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.8■□□□□ 0.283e-9■□□□□ 10.6
NUP98-201ENST00000324932 ZKSCAN5Q9Y2L8 839 aa16.79■□□□□ 0.28
NUP98-201ENST00000324932 FAM200AQ8TCP9 573 aa16.79■□□□□ 0.28
NUP98-201ENST00000324932 TCP11L1Q9NUJ3 509 aa16.79■□□□□ 0.28
NUP98-201ENST00000324932 SLU7O95391 586 aaKnown RBP16.79■□□□□ 0.28
NUP98-201ENST00000324932 RBM25P49756 843 aaKnown RBP16.79■□□□□ 0.28
NUP98-201ENST00000324932 RBM27Q9P2N5 1060 aaKnown RBP16.79■□□□□ 0.28
NUP98-201ENST00000324932 GNAT3A8MTJ3 354 aa16.79■□□□□ 0.28
NUP98-201ENST00000324932 N4BP3O15049 544 aa16.79■□□□□ 0.28
NUP98-201ENST00000324932 FERP16591 822 aa16.79■□□□□ 0.28
NUP98-201ENST00000324932 C20orf194Q5TEA3 1177 aa16.79■□□□□ 0.28
NUP98-201ENST00000324932 DDX54Q8TDD1 881 aaKnown RBP16.79■□□□□ 0.28
NUP98-201ENST00000324932 MKNK2Q9HBH9 465 aa16.79■□□□□ 0.28
NUP98-201ENST00000324932 A0A087WZG4 1122 aa16.78■□□□□ 0.28
NUP98-201ENST00000324932 MINDY4BA8MYZ0 360 aa16.78■□□□□ 0.28
NUP98-201ENST00000324932 CYLC1P35663 651 aaPredicted RBP16.78■□□□□ 0.28
NUP98-201ENST00000324932 NLRP5P59047 1200 aa16.78■□□□□ 0.28
NUP98-201ENST00000324932 SPAG1Q07617 926 aa16.78■□□□□ 0.28
NUP98-201ENST00000324932 CALML4Q96GE6 196 aa16.78■□□□□ 0.28
NUP98-201ENST00000324932 MAP3K12Q12852 859 aa16.78■□□□□ 0.28
NUP98-201ENST00000324932 PLVAPQ9BX97 442 aa16.78■□□□□ 0.28
NUP98-201ENST00000324932 MSL1Q68DK7 614 aa16.78■□□□□ 0.28
NUP98-201ENST00000324932 EVI5LQ96CN4 794 aa16.78■□□□□ 0.28
NUP98-201ENST00000324932 CTAGE1Q96RT6 745 aa16.78■□□□□ 0.28
NUP98-201ENST00000324932 DNAI1Q9UI46 699 aa16.78■□□□□ 0.28
NUP98-201ENST00000324932 IKBKGQ9Y6K9 419 aa16.78■□□□□ 0.28
NUP98-201ENST00000324932 ATP2C2O75185 946 aa16.78■□□□□ 0.28
NUP98-201ENST00000324932 TBC1D9Q6ZT07 1266 aa16.78■□□□□ 0.28
NUP98-201ENST00000324932 RTEL1-TNFRSF6BF6WH68 1400 aa16.77■□□□□ 0.28
NUP98-201ENST00000324932 IARSP41252 1262 aaKnown RBP16.77■□□□□ 0.28
NUP98-201ENST00000324932 TXNDC2Q86VQ3 553 aa16.77■□□□□ 0.28
NUP98-201ENST00000324932 ATRIPQ8WXE1 791 aa16.77■□□□□ 0.28
NUP98-201ENST00000324932 LRRC27Q9C0I9 530 aa16.77■□□□□ 0.28
NUP98-201ENST00000324932 IFIT3O14879 490 aaKnown RBP16.77■□□□□ 0.28
NUP98-201ENST00000324932 HS1BP3Q53T59 392 aa16.77■□□□□ 0.28
NUP98-201ENST00000324932 STMN4Q9H169 189 aaPredicted RBP16.77■□□□□ 0.27
NUP98-201ENST00000324932 CCDC172P0C7W6 258 aa16.77■□□□□ 0.27
NUP98-201ENST00000324932 STXBP4Q6ZWJ1 553 aa16.77■□□□□ 0.27
NUP98-201ENST00000324932 CCDC186Q7Z3E2 898 aa16.77■□□□□ 0.27
NUP98-201ENST00000324932 HMG20BQ9P0W2 317 aa16.77■□□□□ 0.27
NUP98-201ENST00000324932 ACTN2P35609 894 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 UBASH3AP57075 661 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 TCERG1LQ5VWI1 586 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 STRN4Q9NRL3 753 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 RMND1Q9NWS8 449 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 TMOD2Q9NZR1 351 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 EBAG9O00559 213 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 POLR3DP05423 398 aaPredicted RBP16.76■□□□□ 0.27
NUP98-201ENST00000324932 MCM6Q14566 821 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 PPP1R14CQ8TAE6 165 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 XRCC6P12956 609 aaKnown RBP eCLIP16.76■□□□□ 0.27
NUP98-201ENST00000324932 IDEP14735 1019 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 CAPN2P17655 700 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 CFAP57Q96MR6 1250 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 USP16Q9Y5T5 823 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 WIZO95785 1651 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 TOM1L2Q6ZVM7 507 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 TTC14Q96N46 770 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 TSNARE1Q96NA8 513 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 CCDC77Q9BR77 488 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 MYO1BO43795 1136 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 DAAM2Q86T65 1068 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 ZSCAN22P10073 491 aaPredicted RBP16.76■□□□□ 0.27
NUP98-201ENST00000324932 CCT2P78371 535 aaKnown RBP16.76■□□□□ 0.27
NUP98-201ENST00000324932 ANKS4BQ8N8V4 417 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 CCDC94Q9BW85 323 aaPredicted RBP16.76■□□□□ 0.27
NUP98-201ENST00000324932 SPINK5Q9NQ38 1064 aaPredicted RBP16.76■□□□□ 0.27
NUP98-201ENST00000324932 ECHDC1Q9NTX5 307 aa16.76■□□□□ 0.27
NUP98-201ENST00000324932 ORC3Q9UBD5 711 aaPredicted RBP16.76■□□□□ 0.27
NUP98-201ENST00000324932 A0A1W2PRG0 241 aa16.75■□□□□ 0.27
NUP98-201ENST00000324932 UBA7P41226 1012 aa16.75■□□□□ 0.27
NUP98-201ENST00000324932 CATIPQ7Z7H3 387 aa16.75■□□□□ 0.27
NUP98-201ENST00000324932 GIMAP6Q6P9H5 292 aa16.75■□□□□ 0.27
NUP98-201ENST00000324932 TUBBP07437 444 aa16.75■□□□□ 0.27
NUP98-201ENST00000324932 CAVIN4Q5BKX8 364 aa16.75■□□□□ 0.27
NUP98-201ENST00000324932 CCDC121Q6ZUS5 278 aa16.75■□□□□ 0.27
NUP98-201ENST00000324932 MICALL1Q8N3F8 863 aa16.75■□□□□ 0.27
NUP98-201ENST00000324932 ZFP91Q96JP5 570 aaPredicted RBP16.75■□□□□ 0.27
NUP98-201ENST00000324932 CCDC82Q8N4S0 544 aa16.75■□□□□ 0.27
NUP98-201ENST00000324932 RANBP6O60518 1105 aaKnown RBP16.74■□□□□ 0.27
NUP98-201ENST00000324932 FERMT1Q9BQL6 677 aa16.74■□□□□ 0.27
NUP98-201ENST00000324932 ARFGAP2Q8N6H7 521 aa16.74■□□□□ 0.27
NUP98-201ENST00000324932 CUL5Q93034 780 aa16.74■□□□□ 0.27
NUP98-201ENST00000324932 RPGRIP1LQ68CZ1 1315 aa16.74■□□□□ 0.27
NUP98-201ENST00000324932 KIF4AO95239 1232 aa16.74■□□□□ 0.27
NUP98-201ENST00000324932 CCDC96Q2M329 555 aa16.74■□□□□ 0.27
NUP98-201ENST00000324932 GOLGA1Q92805 767 aa16.74■□□□□ 0.27
NUP98-201ENST00000324932 SREK1Q8WXA9 508 aaKnown RBP16.74■□□□□ 0.27
NUP98-201ENST00000324932 TRIM47Q96LD4 638 aa16.74■□□□□ 0.27
NUP98-201ENST00000324932 RRS1Q15050 365 aaKnown RBP16.74■□□□□ 0.27
NUP98-201ENST00000324932 TTC21AQ8NDW8 1320 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms