RNA–Protein interactions for RNA: ENST00000317555.6

PGAM5-201, Transcript of PGAM family member 5, mitochondrial serine/threonine protein phosphatase, humanhuman

TSL 1 (best) BASIC

Gene PGAM5, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM5-201ENST00000317555 PDZRN3Q9UPQ7 1066 aa35.01■■■■□ 3.2
PGAM5-201ENST00000317555 ERBB4Q15303 1308 aa35.01■■■■□ 3.19
PGAM5-201ENST00000317555 MYL6BP14649 208 aa35■■■■□ 3.19
PGAM5-201ENST00000317555 ST5P78524 1137 aa35■■■■□ 3.19
PGAM5-201ENST00000317555 NBPF5PQ86XG9 351 aaPredicted RBP34.99■■■■□ 3.19
PGAM5-201ENST00000317555 NIP7Q9Y221 180 aaKnown RBP eCLIP34.99■■■■□ 3.19
PGAM5-201ENST00000317555 NUP98P52948 1817 aa34.98■■■■□ 3.19
PGAM5-201ENST00000317555 CHL1O00533 1208 aa34.98■■■■□ 3.19
PGAM5-201ENST00000317555 TTLL6Q8N841 843 aa34.98■■■■□ 3.19
PGAM5-201ENST00000317555 LAS1LQ9Y4W2 734 aaKnown RBP34.98■■■■□ 3.19
PGAM5-201ENST00000317555 HLFQ16534 295 aa34.97■■■■□ 3.19
PGAM5-201ENST00000317555 KIF6Q6ZMV9 814 aa34.97■■■■□ 3.19
PGAM5-201ENST00000317555 COL11A2P13942 1736 aaPredicted RBP34.97■■■■□ 3.19
PGAM5-201ENST00000317555 EIF2S2P20042 333 aaKnown RBP34.96■■■■□ 3.19
PGAM5-201ENST00000317555 GPBP1L1Q9HC44 474 aaPredicted RBP34.96■■■■□ 3.19
PGAM5-201ENST00000317555 ERVV-1B6SEH8 477 aa34.95■■■■□ 3.19
PGAM5-201ENST00000317555 APAF1O14727 1248 aa34.95■■■■□ 3.19
PGAM5-201ENST00000317555 TTLL7Q6ZT98 887 aa34.95■■■■□ 3.19
PGAM5-201ENST00000317555 MAP3K15Q6ZN16 1313 aa34.95■■■■□ 3.19
PGAM5-201ENST00000317555 ZNF526Q8TF50 670 aaPredicted RBP34.94■■■■□ 3.18
PGAM5-201ENST00000317555 CCDC184Q52MB2 194 aa34.93■■■■□ 3.18
PGAM5-201ENST00000317555 TPTE2Q6XPS3 522 aa34.93■■■■□ 3.18
PGAM5-201ENST00000317555 ZNF622Q969S3 477 aaKnown RBP eCLIP34.93■■■■□ 3.18
PGAM5-201ENST00000317555 SBF1O95248 1867 aa34.91■■■■□ 3.18
PGAM5-201ENST00000317555 ANP32CO43423 234 aa34.91■■■■□ 3.18
PGAM5-201ENST00000317555 C9orf131Q5VYM1 1079 aa34.9■■■■□ 3.18
PGAM5-201ENST00000317555 CFAP44Q96MT7 982 aa34.9■■■■□ 3.18
PGAM5-201ENST00000317555 FAM177BA6PVY3 158 aa34.89■■■■□ 3.18
PGAM5-201ENST00000317555 PDIA6Q15084 440 aa34.89■■■■□ 3.18
PGAM5-201ENST00000317555 ZBTB3Q9H5J0 574 aa34.89■■■■□ 3.18
PGAM5-201ENST00000317555 C1QTNF8P60827 252 aa34.88■■■■□ 3.17
PGAM5-201ENST00000317555 KRT24Q2M2I5 525 aa34.88■■■■□ 3.17
PGAM5-201ENST00000317555 CACNA1SQ13698 1873 aa34.87■■■■□ 3.17
PGAM5-201ENST00000317555 LRP10Q7Z4F1 713 aa34.87■■■■□ 3.17
PGAM5-201ENST00000317555 NECTIN2Q92692 538 aa34.87■■■■□ 3.17
PGAM5-201ENST00000317555 SRGNP10124 158 aa34.86■■■■□ 3.17
PGAM5-201ENST00000317555 CALD1Q05682 793 aaKnown RBP34.86■■■■□ 3.17
PGAM5-201ENST00000317555 GTF2E1P29083 439 aaPredicted RBP34.85■■■■□ 3.17
PGAM5-201ENST00000317555 PROSER3Q2NL68 480 aa34.85■■■■□ 3.17
PGAM5-201ENST00000317555 STYK1Q6J9G0 422 aa34.85■■■■□ 3.17
PGAM5-201ENST00000317555 ANXA1P04083 346 aa34.84■■■■□ 3.17
PGAM5-201ENST00000317555 CNKSR1Q969H4 720 aa34.84■■■■□ 3.17
PGAM5-201ENST00000317555 MASTLQ96GX5 879 aa34.84■■■■□ 3.17
PGAM5-201ENST00000317555 NYXQ9GZU5 481 aa34.84■■■■□ 3.17
PGAM5-201ENST00000317555 RNF181Q9P0P0 153 aa34.84■■■■□ 3.17
PGAM5-201ENST00000317555 ARFGEF2Q9Y6D5 1785 aa34.84■■■■□ 3.17
PGAM5-201ENST00000317555 RASSF7Q02833 373 aa34.83■■■■□ 3.17
PGAM5-201ENST00000317555 GIGYF2Q6Y7W6 1299 aaKnown RBP34.83■■■■□ 3.17
PGAM5-201ENST00000317555 MRS2Q9HD23 443 aa34.83■■■■□ 3.17
PGAM5-201ENST00000317555 HOXB7P09629 217 aa34.82■■■■□ 3.16
PGAM5-201ENST00000317555 GPTP24298 496 aa34.82■■■■□ 3.16
PGAM5-201ENST00000317555 MBIPQ9NS73 344 aa34.82■■■■□ 3.16
PGAM5-201ENST00000317555 IFT57Q9NWB7 429 aa34.82■■■■□ 3.16
PGAM5-201ENST00000317555 SLX4Q8IY92 1834 aa34.82■■■■□ 3.16
PGAM5-201ENST00000317555 ZNF853P0CG23 659 aa34.81■■■■□ 3.16
PGAM5-201ENST00000317555 DDX21Q9NR30 783 aaKnown RBP eCLIP34.81■■■■□ 3.16
PGAM5-201ENST00000317555 KLRG2A4D1S0 409 aaPredicted RBP34.8■■■■□ 3.16
PGAM5-201ENST00000317555 GNAI1P63096 354 aa34.8■■■■□ 3.16
PGAM5-201ENST00000317555 HDGFL1Q5TGJ6 251 aa34.8■■■■□ 3.16
PGAM5-201ENST00000317555 ZNF219Q9P2Y4 722 aaPredicted RBP34.8■■■■□ 3.16
PGAM5-201ENST00000317555 CCDC88AQ3V6T2 1871 aa34.8■■■■□ 3.16
PGAM5-201ENST00000317555 IBTKQ9P2D0 1353 aaPredicted RBP34.79■■■■□ 3.16
PGAM5-201ENST00000317555 C21orf2O43822 256 aa34.79■■■■□ 3.16
PGAM5-201ENST00000317555 ZNF34Q8IZ26 560 aa34.79■■■■□ 3.16
PGAM5-201ENST00000317555 UBN2Q6ZU65 1347 aa34.79■■■■□ 3.16
PGAM5-201ENST00000317555 NPR1P16066 1061 aa34.78■■■■□ 3.16
PGAM5-201ENST00000317555 LMNB1P20700 586 aa34.78■■■■□ 3.16
PGAM5-201ENST00000317555 PRPF40BQ6NWY9 871 aaKnown RBP34.78■■■■□ 3.16
PGAM5-201ENST00000317555 COPS6Q7L5N1 327 aa34.78■■■■□ 3.16
PGAM5-201ENST00000317555 FER1L6Q2WGJ9 1857 aa34.78■■■■□ 3.16
PGAM5-201ENST00000317555 AIMP1Q12904 312 aaKnown RBP34.77■■■■□ 3.16
PGAM5-201ENST00000317555 XAGE3Q8WTP9 111 aa34.77■■■■□ 3.16
PGAM5-201ENST00000317555 CHPF2Q9P2E5 772 aa34.77■■■■□ 3.16
PGAM5-201ENST00000317555 NFKBIEO00221 500 aa34.76■■■■□ 3.16
PGAM5-201ENST00000317555 DUSP27Q5VZP5 1158 aa34.76■■■■□ 3.16
PGAM5-201ENST00000317555 NUTM1Q86Y26 1132 aa34.76■■■■□ 3.16
PGAM5-201ENST00000317555 ANKRD36CQ5JPF3 1778 aa34.76■■■■□ 3.15
PGAM5-201ENST00000317555 TNRC6CQ9HCJ0 1690 aaKnown RBP34.76■■■■□ 3.15
PGAM5-201ENST00000317555 ABCC12Q96J65 1359 aa34.75■■■■□ 3.15
PGAM5-201ENST00000317555 ERFEQ4G0M1 354 aa34.74■■■■□ 3.15
PGAM5-201ENST00000317555 PARP10Q53GL7 1025 aa34.74■■■■□ 3.15
PGAM5-201ENST00000317555 SUSD4Q5VX71 490 aa34.74■■■■□ 3.15
PGAM5-201ENST00000317555 DBF4Q9UBU7 674 aaPredicted RBP34.74■■■■□ 3.15
PGAM5-201ENST00000317555 RIC1Q4ADV7 1423 aa34.72■■■■□ 3.15
PGAM5-201ENST00000317555 PRELPP51888 382 aa34.72■■■■□ 3.15
PGAM5-201ENST00000317555 SOGA3Q5TF21 947 aa34.72■■■■□ 3.15
PGAM5-201ENST00000317555 PPP1R42Q7Z4L9 355 aa34.72■■■■□ 3.15
PGAM5-201ENST00000317555 ZC3H4Q9UPT8 1303 aaKnown RBP34.72■■■■□ 3.15
PGAM5-201ENST00000317555 NTSR2O95665 410 aa34.71■■■■□ 3.15
PGAM5-201ENST00000317555 HSP90AB3PQ58FF7 597 aa34.71■■■■□ 3.15
PGAM5-201ENST00000317555 TIAM2Q8IVF5 1701 aa34.7■■■■□ 3.15
PGAM5-201ENST00000317555 KIF3CO14782 793 aa34.7■■■■□ 3.15
PGAM5-201ENST00000317555 CCDC27Q2M243 656 aa34.69■■■■□ 3.14
PGAM5-201ENST00000317555 KDM2BQ8NHM5 1336 aa34.69■■■■□ 3.14
PGAM5-201ENST00000317555 DICER1Q9UPY3 1922 aaKnown RBP34.69■■■■□ 3.14
PGAM5-201ENST00000317555 ALDH1B1P30837 517 aa34.68■■■■□ 3.14
PGAM5-201ENST00000317555 CRY2Q49AN0 593 aa34.68■■■■□ 3.14
PGAM5-201ENST00000317555 TAOK3Q9H2K8 898 aa34.68■■■■□ 3.14
PGAM5-201ENST00000317555 NMRK2Q9NPI5 230 aa34.68■■■■□ 3.14
PGAM5-201ENST00000317555 LTBP3Q9NS15 1303 aa34.67■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms