RNA–Protein interactions for RNA: ENST00000316853.10

KLHDC4-202, Transcript of kelch domain containing 4, humanhuman

TSL 1 (best)

Gene KLHDC4, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-202ENST00000316853 CARMIL3Q8ND23 1372 aa23.59■■□□□ 1.37
KLHDC4-202ENST00000316853 BRCA1P38398 1863 aaKnown RBP23.59■■□□□ 1.37
KLHDC4-202ENST00000316853 GRIN3BO60391 1043 aa23.58■■□□□ 1.37
KLHDC4-202ENST00000316853 HLFQ16534 295 aa23.58■■□□□ 1.37
KLHDC4-202ENST00000316853 KIF6Q6ZMV9 814 aa23.58■■□□□ 1.37
KLHDC4-202ENST00000316853 NPHP1O15259 732 aa23.57■■□□□ 1.36
KLHDC4-202ENST00000316853 CHRNA5P30532 468 aa23.57■■□□□ 1.36
KLHDC4-202ENST00000316853 PDIA6Q15084 440 aa23.57■■□□□ 1.36
KLHDC4-202ENST00000316853 CCDC27Q2M243 656 aa23.57■■□□□ 1.36
KLHDC4-202ENST00000316853 PROSER3Q2NL68 480 aa23.57■■□□□ 1.36
KLHDC4-202ENST00000316853 CCDC24Q8N4L8 307 aa23.57■■□□□ 1.36
KLHDC4-202ENST00000316853 HDGFL1Q5TGJ6 251 aa23.56■■□□□ 1.36
KLHDC4-202ENST00000316853 DUSP27Q5VZP5 1158 aa23.56■■□□□ 1.36
KLHDC4-202ENST00000316853 ZBTB3Q9H5J0 574 aa23.56■■□□□ 1.36
KLHDC4-202ENST00000316853 NIP7Q9Y221 180 aaKnown RBP eCLIP23.56■■□□□ 1.36
KLHDC4-202ENST00000316853 MAP3K15Q6ZN16 1313 aa23.56■■□□□ 1.36
KLHDC4-202ENST00000316853 ANKRD31Q8N7Z5 1873 aa23.56■■□□□ 1.36
KLHDC4-202ENST00000316853 ELL2O00472 640 aaPredicted RBP23.55■■□□□ 1.36
KLHDC4-202ENST00000316853 KCNA3P22001 575 aa23.55■■□□□ 1.36
KLHDC4-202ENST00000316853 BCS1LQ9Y276 419 aa23.55■■□□□ 1.36
KLHDC4-202ENST00000316853 FAM177BA6PVY3 158 aa23.54■■□□□ 1.36
KLHDC4-202ENST00000316853 PRR5LQ6MZQ0 368 aa23.54■■□□□ 1.36
KLHDC4-202ENST00000316853 ERVV-1B6SEH8 477 aa23.53■■□□□ 1.36
KLHDC4-202ENST00000316853 HOXB7P09629 217 aa23.53■■□□□ 1.36
KLHDC4-202ENST00000316853 AIMP1Q12904 312 aaKnown RBP23.53■■□□□ 1.36
KLHDC4-202ENST00000316853 LRP10Q7Z4F1 713 aa23.53■■□□□ 1.36
KLHDC4-202ENST00000316853 NBPF5PQ86XG9 351 aaPredicted RBP23.53■■□□□ 1.36
KLHDC4-202ENST00000316853 CNBD1Q8NA66 436 aa23.53■■□□□ 1.36
KLHDC4-202ENST00000316853 TSR2Q969E8 191 aaKnown RBP23.53■■□□□ 1.36
KLHDC4-202ENST00000316853 PIM2Q9P1W9 311 aa23.53■■□□□ 1.36
KLHDC4-202ENST00000316853 CHPF2Q9P2E5 772 aa23.53■■□□□ 1.36
KLHDC4-202ENST00000316853 RGL2O15211 777 aa23.52■■□□□ 1.36
KLHDC4-202ENST00000316853 DDX21Q9NR30 783 aaKnown RBP eCLIP23.52■■□□□ 1.36
KLHDC4-202ENST00000316853 NCBP3Q53F19 620 aaKnown RBP23.51■■□□□ 1.35
KLHDC4-202ENST00000316853 COPS6Q7L5N1 327 aa23.51■■□□□ 1.35
KLHDC4-202ENST00000316853 C8orf58Q8NAV2 365 aa23.51■■□□□ 1.35
KLHDC4-202ENST00000316853 DLEC1Q9Y238 1755 aa23.5■■□□□ 1.35
KLHDC4-202ENST00000316853 ARFGEF1Q9Y6D6 1849 aa23.5■■□□□ 1.35
KLHDC4-202ENST00000316853 ST5P78524 1137 aa23.5■■□□□ 1.35
KLHDC4-202ENST00000316853 C2CD5Q86YS7 1000 aa23.5■■□□□ 1.35
KLHDC4-202ENST00000316853 XAGE3Q8WTP9 111 aa23.5■■□□□ 1.35
KLHDC4-202ENST00000316853 H0YIN7 160 aa23.49■■□□□ 1.35
KLHDC4-202ENST00000316853 GPTP24298 496 aa23.49■■□□□ 1.35
KLHDC4-202ENST00000316853 BRIP1Q9BX63 1249 aa23.49■■□□□ 1.35
KLHDC4-202ENST00000316853 DBF4Q9UBU7 674 aaPredicted RBP23.49■■□□□ 1.35
KLHDC4-202ENST00000316853 PDE6BP35913 854 aa23.48■■□□□ 1.35
KLHDC4-202ENST00000316853 DALRD3Q5D0E6 543 aaKnown RBP23.48■■□□□ 1.35
KLHDC4-202ENST00000316853 TPTE2Q6XPS3 522 aa23.48■■□□□ 1.35
KLHDC4-202ENST00000316853 GIGYF2Q6Y7W6 1299 aaKnown RBP23.48■■□□□ 1.35
KLHDC4-202ENST00000316853 IL16Q14005 1332 aa23.48■■□□□ 1.35
KLHDC4-202ENST00000316853 TSPYL6Q8N831 410 aa23.47■■□□□ 1.35
KLHDC4-202ENST00000316853 COL11A2P13942 1736 aaPredicted RBP23.47■■□□□ 1.35
KLHDC4-202ENST00000316853 CACNA1SQ13698 1873 aa23.47■■□□□ 1.35
KLHDC4-202ENST00000316853 GTF2E1P29083 439 aaPredicted RBP23.46■■□□□ 1.35
KLHDC4-202ENST00000316853 ANKRD36CQ5JPF3 1778 aa23.46■■□□□ 1.35
KLHDC4-202ENST00000316853 DIEXFQ68CQ4 756 aaKnown RBP23.46■■□□□ 1.35
KLHDC4-202ENST00000316853 WDR63Q8IWG1 891 aa23.46■■□□□ 1.35
KLHDC4-202ENST00000316853 ATP10DQ9P241 1426 aa23.46■■□□□ 1.35
KLHDC4-202ENST00000316853 CCER2I3L3R5 266 aa23.45■■□□□ 1.34
KLHDC4-202ENST00000316853 ARHGAP27Q6ZUM4 889 aa23.45■■□□□ 1.34
KLHDC4-202ENST00000316853 HYPKQ9NX55 129 aa23.45■■□□□ 1.34
KLHDC4-202ENST00000316853 ZNF34Q8IZ26 560 aa23.44■■□□□ 1.34
KLHDC4-202ENST00000316853 ZNF622Q969S3 477 aaKnown RBP eCLIP23.44■■□□□ 1.341e-9■□□□□ 10.1
KLHDC4-202ENST00000316853 UBN2Q6ZU65 1347 aa23.43■■□□□ 1.34
KLHDC4-202ENST00000316853 NYXQ9GZU5 481 aa23.43■■□□□ 1.34
KLHDC4-202ENST00000316853 FANCIQ9NVI1 1328 aa23.42■■□□□ 1.34
KLHDC4-202ENST00000316853 CCDC30Q5VVM6 783 aa23.42■■□□□ 1.34
KLHDC4-202ENST00000316853 SUSD4Q5VX71 490 aa23.42■■□□□ 1.34
KLHDC4-202ENST00000316853 NUTM1Q86Y26 1132 aa23.42■■□□□ 1.34
KLHDC4-202ENST00000316853 TTLL6Q8N841 843 aa23.42■■□□□ 1.34
KLHDC4-202ENST00000316853 PDZRN3Q9UPQ7 1066 aa23.42■■□□□ 1.34
KLHDC4-202ENST00000316853 TWISTNBQ3B726 338 aaPredicted RBP23.41■■□□□ 1.34
KLHDC4-202ENST00000316853 ANKRD13DQ6ZTN6 518 aa23.41■■□□□ 1.34
KLHDC4-202ENST00000316853 ARFGEF2Q9Y6D5 1785 aa23.4■■□□□ 1.34
KLHDC4-202ENST00000316853 TCERG1O14776 1098 aaKnown RBP23.4■■□□□ 1.34
KLHDC4-202ENST00000316853 ERFEQ4G0M1 354 aa23.4■■□□□ 1.34
KLHDC4-202ENST00000316853 HSP90AB3PQ58FF7 597 aa23.4■■□□□ 1.34
KLHDC4-202ENST00000316853 PLBD2Q8NHP8 589 aa23.4■■□□□ 1.34
KLHDC4-202ENST00000316853 CHMP4AQ9BY43 222 aa23.4■■□□□ 1.34
KLHDC4-202ENST00000316853 PHAXQ9H814 394 aaKnown RBP23.4■■□□□ 1.34
KLHDC4-202ENST00000316853 SPINK5Q9NQ38 1064 aaPredicted RBP23.4■■□□□ 1.34
KLHDC4-202ENST00000316853 SRGNP10124 158 aa23.39■■□□□ 1.33
KLHDC4-202ENST00000316853 PPP1R42Q7Z4L9 355 aa23.39■■□□□ 1.33
KLHDC4-202ENST00000316853 GOLGA2Q08379 1002 aa23.38■■□□□ 1.33
KLHDC4-202ENST00000316853 TCIRG1Q13488 830 aa23.38■■□□□ 1.33
KLHDC4-202ENST00000316853 PARP10Q53GL7 1025 aa23.38■■□□□ 1.33
KLHDC4-202ENST00000316853 MIER1Q8N108 512 aa23.38■■□□□ 1.33
KLHDC4-202ENST00000316853 ZNF428Q96B54 188 aa23.38■■□□□ 1.33
KLHDC4-202ENST00000316853 ABCC12Q96J65 1359 aa23.38■■□□□ 1.33
KLHDC4-202ENST00000316853 TNRC6CQ9HCJ0 1690 aaKnown RBP23.38■■□□□ 1.33
KLHDC4-202ENST00000316853 SLX4Q8IY92 1834 aa23.38■■□□□ 1.33
KLHDC4-202ENST00000316853 NTSR2O95665 410 aa23.37■■□□□ 1.33
KLHDC4-202ENST00000316853 EXOSC9Q06265 439 aaKnown RBP23.37■■□□□ 1.33
KLHDC4-202ENST00000316853 MASTLQ96GX5 879 aa23.37■■□□□ 1.33
KLHDC4-202ENST00000316853 ZNF219Q9P2Y4 722 aaPredicted RBP23.37■■□□□ 1.33
KLHDC4-202ENST00000316853 STYK1Q6J9G0 422 aa23.36■■□□□ 1.33
KLHDC4-202ENST00000316853 RIC3Q7Z5B4 369 aa23.36■■□□□ 1.33
KLHDC4-202ENST00000316853 ZNF784Q8NCA9 323 aaPredicted RBP23.36■■□□□ 1.33
KLHDC4-202ENST00000316853 UTP14AQ9BVJ6 771 aaKnown RBP23.36■■□□□ 1.33
KLHDC4-202ENST00000316853 STK31Q9BXU1 1019 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 553 ms