RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 FER1L6Q2WGJ9 1857 aa11.13□□□□□ -0.63
MSL3-201ENST00000312196 EIF4A1P60842 406 aaKnown RBP11.13□□□□□ -0.63
MSL3-201ENST00000312196 RRAGCQ9HB90 399 aa11.13□□□□□ -0.63
MSL3-201ENST00000312196 TIAM2Q8IVF5 1701 aa11.13□□□□□ -0.63
MSL3-201ENST00000312196 RNF123Q5XPI4 1314 aa11.12□□□□□ -0.63
MSL3-201ENST00000312196 COL11A2P13942 1736 aaPredicted RBP11.12□□□□□ -0.63
MSL3-201ENST00000312196 KCNQ3O43525 872 aa11.12□□□□□ -0.63
MSL3-201ENST00000312196 TBC1D9BQ66K14 1250 aa11.12□□□□□ -0.63
MSL3-201ENST00000312196 NPM2Q86SE8 214 aaKnown RBP11.12□□□□□ -0.63
MSL3-201ENST00000312196 DZIP3Q86Y13 1208 aaKnown RBP11.12□□□□□ -0.63
MSL3-201ENST00000312196 NFKBIEO00221 500 aa11.12□□□□□ -0.63
MSL3-201ENST00000312196 A1BGP04217 495 aa11.12□□□□□ -0.63
MSL3-201ENST00000312196 ZEB1P37275 1124 aaPredicted RBP11.12□□□□□ -0.63
MSL3-201ENST00000312196 MCM10Q7L590 875 aa11.12□□□□□ -0.63
MSL3-201ENST00000312196 L3MBTL3Q96JM7 780 aaPredicted RBP11.12□□□□□ -0.63
MSL3-201ENST00000312196 SETDB2Q96T68 719 aa11.12□□□□□ -0.63
MSL3-201ENST00000312196 USP16Q9Y5T5 823 aa11.12□□□□□ -0.63
MSL3-201ENST00000312196 HOXB7P09629 217 aa11.11□□□□□ -0.63
MSL3-201ENST00000312196 ST5P78524 1137 aa11.11□□□□□ -0.63
MSL3-201ENST00000312196 PRR5LQ6MZQ0 368 aa11.11□□□□□ -0.63
MSL3-201ENST00000312196 NBPF26B4DH59 902 aa11.1□□□□□ -0.63
MSL3-201ENST00000312196 CC2D2BQ6DHV5 1058 aa11.1□□□□□ -0.63
MSL3-201ENST00000312196 NBPF10Q6P3W6 841 aaKnown RBP11.1□□□□□ -0.63
MSL3-201ENST00000312196 NBPF15Q8N660 670 aa11.1□□□□□ -0.63
MSL3-201ENST00000312196 MASTLQ96GX5 879 aa11.1□□□□□ -0.63
MSL3-201ENST00000312196 RUNDC1Q96C34 613 aa11.09□□□□□ -0.63
MSL3-201ENST00000312196 NYXQ9GZU5 481 aa11.09□□□□□ -0.63
MSL3-201ENST00000312196 IQCA1LA6NCM1 817 aa11.09□□□□□ -0.63
MSL3-201ENST00000312196 NPR1P16066 1061 aa11.09□□□□□ -0.63
MSL3-201ENST00000312196 TMPOP42166 694 aaKnown RBP11.09□□□□□ -0.63
MSL3-201ENST00000312196 CNBD1Q8NA66 436 aa11.09□□□□□ -0.63
MSL3-201ENST00000312196 NUP98P52948 1817 aa11.09□□□□□ -0.63
MSL3-201ENST00000312196 MAP3K15Q6ZN16 1313 aa11.09□□□□□ -0.63
MSL3-201ENST00000312196 SCN4AP35499 1836 aa11.08□□□□□ -0.64
MSL3-201ENST00000312196 SRGNP10124 158 aa11.08□□□□□ -0.64
MSL3-201ENST00000312196 CHADLQ6NUI6 762 aa11.08□□□□□ -0.64
MSL3-201ENST00000312196 TPTE2Q6XPS3 522 aa11.08□□□□□ -0.64
MSL3-201ENST00000312196 C7orf43Q8WVR3 580 aa11.08□□□□□ -0.64
MSL3-201ENST00000312196 VPS33BQ9H267 617 aa11.08□□□□□ -0.64
MSL3-201ENST00000312196 CREBZFQ9NS37 354 aa11.08□□□□□ -0.64
MSL3-201ENST00000312196 POTECB2RU33 542 aa11.08□□□□□ -0.64
MSL3-201ENST00000312196 PRELPP51888 382 aa11.08□□□□□ -0.64
MSL3-201ENST00000312196 RASSF7Q02833 373 aa11.08□□□□□ -0.64
MSL3-201ENST00000312196 TAOK3Q9H2K8 898 aa11.08□□□□□ -0.64
MSL3-201ENST00000312196 TBC1D2BQ9UPU7 963 aa11.08□□□□□ -0.64
MSL3-201ENST00000312196 ANKRD36CQ5JPF3 1778 aa11.07□□□□□ -0.64
MSL3-201ENST00000312196 CHL1O00533 1208 aa11.07□□□□□ -0.64
MSL3-201ENST00000312196 RTKN2Q8IZC4 609 aa11.07□□□□□ -0.64
MSL3-201ENST00000312196 CHMP4AQ9BY43 222 aa11.07□□□□□ -0.64
MSL3-201ENST00000312196 DCTN1Q14203 1278 aa11.07□□□□□ -0.64
MSL3-201ENST00000312196 PARP10Q53GL7 1025 aa11.07□□□□□ -0.64
MSL3-201ENST00000312196 CCDC93Q567U6 631 aa11.07□□□□□ -0.64
MSL3-201ENST00000312196 LRP10Q7Z4F1 713 aa11.07□□□□□ -0.64
MSL3-201ENST00000312196 LDHDQ86WU2 507 aa11.07□□□□□ -0.64
MSL3-201ENST00000312196 HOXA10P31260 410 aaPredicted RBP11.06□□□□□ -0.64
MSL3-201ENST00000312196 RIPK4P57078 832 aa11.06□□□□□ -0.64
MSL3-201ENST00000312196 CALD1Q05682 793 aaKnown RBP11.06□□□□□ -0.64
MSL3-201ENST00000312196 SLC10A5Q5PT55 438 aa11.06□□□□□ -0.64
MSL3-201ENST00000312196 ZNF34Q8IZ26 560 aa11.06□□□□□ -0.64
MSL3-201ENST00000312196 PRKRIP1Q9H875 184 aaPredicted RBP11.06□□□□□ -0.64
MSL3-201ENST00000312196 ALDH1B1P30837 517 aa11.06□□□□□ -0.64
MSL3-201ENST00000312196 FKBP4Q02790 459 aaKnown RBP eCLIP11.06□□□□□ -0.64
MSL3-201ENST00000312196 CRY2Q49AN0 593 aa11.06□□□□□ -0.64
MSL3-201ENST00000312196 HSP90AB3PQ58FF7 597 aa11.06□□□□□ -0.64
MSL3-201ENST00000312196 KIF6Q6ZMV9 814 aa11.06□□□□□ -0.64
MSL3-201ENST00000312196 PRDM10Q9NQV6 1147 aa11.06□□□□□ -0.64
MSL3-201ENST00000312196 WWC3Q9ULE0 1092 aa11.06□□□□□ -0.64
MSL3-201ENST00000312196 NBPF5PQ86XG9 351 aaPredicted RBP11.05□□□□□ -0.64
MSL3-201ENST00000312196 PASKQ96RG2 1323 aa11.05□□□□□ -0.64
MSL3-201ENST00000312196 SNED1Q8TER0 1413 aa11.05□□□□□ -0.64
MSL3-201ENST00000312196 ADAMTSL1Q8N6G6 1762 aa11.05□□□□□ -0.64
MSL3-201ENST00000312196 ERFEQ4G0M1 354 aa11.04□□□□□ -0.64
MSL3-201ENST00000312196 GIGYF2Q6Y7W6 1299 aaKnown RBP11.04□□□□□ -0.64
MSL3-201ENST00000312196 PSMD1Q99460 953 aa11.04□□□□□ -0.64
MSL3-201ENST00000312196 TSPYL4Q9UJ04 414 aa11.04□□□□□ -0.64
MSL3-201ENST00000312196 PRAMEF22A3QJZ6 481 aa11.04□□□□□ -0.64
MSL3-201ENST00000312196 DDX10Q13206 875 aaKnown RBP11.04□□□□□ -0.64
MSL3-201ENST00000312196 WDR43Q15061 677 aaKnown RBP eCLIP11.04□□□□□ -0.64
MSL3-201ENST00000312196 PRPF40BQ6NWY9 871 aaKnown RBP11.04□□□□□ -0.64
MSL3-201ENST00000312196 ZNF622Q969S3 477 aaKnown RBP eCLIP11.04□□□□□ -0.642e-6■■■□□ 18.8
MSL3-201ENST00000312196 CRAMP1Q96RY5 1269 aa11.04□□□□□ -0.64
MSL3-201ENST00000312196 SLX4Q8IY92 1834 aa11.04□□□□□ -0.64
MSL3-201ENST00000312196 ZNF853P0CG23 659 aa11.03□□□□□ -0.64
MSL3-201ENST00000312196 PDIA6Q15084 440 aa11.03□□□□□ -0.64
MSL3-201ENST00000312196 TRIM35Q9UPQ4 493 aa11.03□□□□□ -0.64
MSL3-201ENST00000312196 CNTNAP1P78357 1384 aa11.03□□□□□ -0.64
MSL3-201ENST00000312196 PNMA8AQ86V59 439 aaPredicted RBP11.03□□□□□ -0.64
MSL3-201ENST00000312196 NIP7Q9Y221 180 aaKnown RBP eCLIP11.03□□□□□ -0.64
MSL3-201ENST00000312196 CCDC88AQ3V6T2 1871 aa11.02□□□□□ -0.64
MSL3-201ENST00000312196 C21orf2O43822 256 aa11.02□□□□□ -0.64
MSL3-201ENST00000312196 CCDC27Q2M243 656 aa11.02□□□□□ -0.64
MSL3-201ENST00000312196 BICDL1Q6ZP65 573 aa11.02□□□□□ -0.64
MSL3-201ENST00000312196 CFAP44Q96MT7 982 aa11.02□□□□□ -0.64
MSL3-201ENST00000312196 DDX21Q9NR30 783 aaKnown RBP eCLIP11.02□□□□□ -0.64
MSL3-201ENST00000312196 FZD9O00144 591 aa11.02□□□□□ -0.65
MSL3-201ENST00000312196 PPP1R42Q7Z4L9 355 aa11.02□□□□□ -0.65
MSL3-201ENST00000312196 IFT57Q9NWB7 429 aa11.02□□□□□ -0.65
MSL3-201ENST00000312196 CNGB1Q14028 1251 aaPredicted RBP11.01□□□□□ -0.65
MSL3-201ENST00000312196 HLFQ16534 295 aa11.01□□□□□ -0.65
MSL3-201ENST00000312196 TAF1DQ9H5J8 278 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms