RNA–Protein interactions for RNA: ENST00000311895.7

ERCC4-201, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC4, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-201ENST00000311895 IFIT5Q13325 482 aaKnown RBP9.85□□□□□ -0.83
ERCC4-201ENST00000311895 CTR9Q6PD62 1173 aa9.85□□□□□ -0.83
ERCC4-201ENST00000311895 MICU3Q86XE3 530 aa9.85□□□□□ -0.83
ERCC4-201ENST00000311895 DZIP1Q86YF9 867 aaKnown RBP9.85□□□□□ -0.83
ERCC4-201ENST00000311895 USP16Q9Y5T5 823 aa9.85□□□□□ -0.83
ERCC4-201ENST00000311895 CRACR2BQ8N4Y2 399 aaPredicted RBP9.85□□□□□ -0.83
ERCC4-201ENST00000311895 INCENPQ9NQS7 918 aa9.85□□□□□ -0.83
ERCC4-201ENST00000311895 YEATS4O95619 227 aa9.85□□□□□ -0.83
ERCC4-201ENST00000311895 ANXA1P04083 346 aa9.85□□□□□ -0.83
ERCC4-201ENST00000311895 PAFAH1B1P43034 410 aa9.85□□□□□ -0.83
ERCC4-201ENST00000311895 TBC1D32Q96NH3 1257 aa9.85□□□□□ -0.83
ERCC4-201ENST00000311895 A0A087WZG4 1122 aa9.84□□□□□ -0.83
ERCC4-201ENST00000311895 CTAGE5O15320 804 aa9.84□□□□□ -0.83
ERCC4-201ENST00000311895 ZBTB3Q9H5J0 574 aa9.84□□□□□ -0.83
ERCC4-201ENST00000311895 JADE2Q9NQC1 790 aa9.84□□□□□ -0.83
ERCC4-201ENST00000311895 CDK13Q14004 1512 aaKnown RBP9.84□□□□□ -0.83
ERCC4-201ENST00000311895 ATP2C2O75185 946 aa9.84□□□□□ -0.83
ERCC4-201ENST00000311895 ANAPC15P60006 121 aa9.84□□□□□ -0.83
ERCC4-201ENST00000311895 ZNF444Q8N0Y2 327 aaPredicted RBP9.84□□□□□ -0.83
ERCC4-201ENST00000311895 DDX19AQ9NUU7 478 aaKnown RBP9.84□□□□□ -0.83
ERCC4-201ENST00000311895 SLC52A1Q9NWF4 448 aa9.84□□□□□ -0.83
ERCC4-201ENST00000311895 GNG11P61952 73 aa9.84□□□□□ -0.83
ERCC4-201ENST00000311895 MAP3K12Q12852 859 aa9.84□□□□□ -0.83
ERCC4-201ENST00000311895 FLIIQ13045 1269 aa9.84□□□□□ -0.83
ERCC4-201ENST00000311895 MMRN2Q9H8L6 949 aa9.84□□□□□ -0.83
ERCC4-201ENST00000311895 USO1O60763 962 aaKnown RBP9.84□□□□□ -0.83
ERCC4-201ENST00000311895 HMGB1P09429 215 aaKnown RBP9.84□□□□□ -0.83
ERCC4-201ENST00000311895 PDIA4P13667 645 aaKnown RBP9.84□□□□□ -0.83
ERCC4-201ENST00000311895 TCERG1LQ5VWI1 586 aa9.84□□□□□ -0.83
ERCC4-201ENST00000311895 CCDC12Q8WUD4 166 aaPredicted RBP9.84□□□□□ -0.83
ERCC4-201ENST00000311895 SMARCC1Q92922 1105 aaPredicted RBP9.84□□□□□ -0.83
ERCC4-201ENST00000311895 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.84□□□□□ -0.83
ERCC4-201ENST00000311895 V9GYY5 206 aaPredicted RBP9.84□□□□□ -0.83
ERCC4-201ENST00000311895 PLEKHH1Q9ULM0 1364 aa9.84□□□□□ -0.83
ERCC4-201ENST00000311895 CCDC196A0A1B0GTZ2 297 aa9.84□□□□□ -0.83
ERCC4-201ENST00000311895 MYO1BO43795 1136 aa9.84□□□□□ -0.83
ERCC4-201ENST00000311895 NOP2P46087 812 aaKnown RBP9.84□□□□□ -0.83
ERCC4-201ENST00000311895 CCDC91Q7Z6B0 441 aa9.84□□□□□ -0.83
ERCC4-201ENST00000311895 CCDC97Q96F63 343 aaPredicted RBP9.84□□□□□ -0.83
ERCC4-201ENST00000311895 TMOD3Q9NYL9 352 aa9.84□□□□□ -0.83
ERCC4-201ENST00000311895 TRMT112Q9UI30 125 aaKnown RBP9.84□□□□□ -0.83
ERCC4-201ENST00000311895 IDEP14735 1019 aa9.83□□□□□ -0.84
ERCC4-201ENST00000311895 TMEM67Q5HYA8 995 aa9.83□□□□□ -0.84
ERCC4-201ENST00000311895 MAATS1Q7Z4T9 603 aa9.83□□□□□ -0.84
ERCC4-201ENST00000311895 IQCA1Q86XH1 822 aa9.83□□□□□ -0.84
ERCC4-201ENST00000311895 EVI5LQ96CN4 794 aa9.83□□□□□ -0.84
ERCC4-201ENST00000311895 TMX3Q96JJ7 454 aa9.83□□□□□ -0.84
ERCC4-201ENST00000311895 SLC26A6Q9BXS9 759 aa9.83□□□□□ -0.84
ERCC4-201ENST00000311895 ZNF219Q9P2Y4 722 aaPredicted RBP9.83□□□□□ -0.84
ERCC4-201ENST00000311895 CCDC194A0A1B0GVG4 234 aa9.83□□□□□ -0.84
ERCC4-201ENST00000311895 TTC22Q5TAA0 569 aa9.83□□□□□ -0.84
ERCC4-201ENST00000311895 POTEJP0CG39 1038 aa9.83□□□□□ -0.84
ERCC4-201ENST00000311895 UBE2HP62256 183 aa9.83□□□□□ -0.84
ERCC4-201ENST00000311895 ANO6Q4KMQ2 910 aa9.83□□□□□ -0.84
ERCC4-201ENST00000311895 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.83□□□□□ -0.84
ERCC4-201ENST00000311895 PPP1R42Q7Z4L9 355 aa9.83□□□□□ -0.84
ERCC4-201ENST00000311895 CALCOCO1Q9P1Z2 691 aa9.83□□□□□ -0.84
ERCC4-201ENST00000311895 ORC3Q9UBD5 711 aaPredicted RBP9.83□□□□□ -0.84
ERCC4-201ENST00000311895 MBIPQ9NS73 344 aa9.83□□□□□ -0.84
ERCC4-201ENST00000311895 DESP17661 470 aa9.82□□□□□ -0.84
ERCC4-201ENST00000311895 AFMP43652 599 aa9.82□□□□□ -0.84
ERCC4-201ENST00000311895 USP48Q86UV5 1035 aa9.82□□□□□ -0.84
ERCC4-201ENST00000311895 C16orf71Q8IYS4 520 aaPredicted RBP9.82□□□□□ -0.84
ERCC4-201ENST00000311895 DRC1Q96MC2 740 aa9.82□□□□□ -0.84
ERCC4-201ENST00000311895 SCLT1Q96NL6 688 aa9.82□□□□□ -0.84
ERCC4-201ENST00000311895 NEK1Q96PY6 1258 aa9.82□□□□□ -0.84
ERCC4-201ENST00000311895 GSDMDP57764 484 aa9.82□□□□□ -0.84
ERCC4-201ENST00000311895 CATIPQ7Z7H3 387 aa9.82□□□□□ -0.84
ERCC4-201ENST00000311895 VPS36Q86VN1 386 aa9.82□□□□□ -0.84
ERCC4-201ENST00000311895 SERPINA10Q9UK55 444 aa9.82□□□□□ -0.84
ERCC4-201ENST00000311895 LRSAM1Q6UWE0 723 aa9.82□□□□□ -0.84
ERCC4-201ENST00000311895 AEBP2Q6ZN18 517 aaPredicted RBP9.82□□□□□ -0.84
ERCC4-201ENST00000311895 SDSP20132 328 aa9.82□□□□□ -0.84
ERCC4-201ENST00000311895 MCM3P25205 808 aa9.82□□□□□ -0.84
ERCC4-201ENST00000311895 CETN2P41208 172 aa9.82□□□□□ -0.84
ERCC4-201ENST00000311895 IARSP41252 1262 aaKnown RBP9.82□□□□□ -0.84
ERCC4-201ENST00000311895 BMP2KLQ5H9B9 411 aa9.82□□□□□ -0.84
ERCC4-201ENST00000311895 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.82□□□□□ -0.84
ERCC4-201ENST00000311895 XRCC6P12956 609 aaKnown RBP eCLIP9.82□□□□□ -0.84
ERCC4-201ENST00000311895 CCDC40Q4G0X9 1142 aa9.82□□□□□ -0.84
ERCC4-201ENST00000311895 ECHDC1Q9NTX5 307 aa9.82□□□□□ -0.84
ERCC4-201ENST00000311895 SLC5A1P13866 664 aa9.81□□□□□ -0.84
ERCC4-201ENST00000311895 METAP2P50579 478 aaKnown RBP eCLIP9.81□□□□□ -0.84
ERCC4-201ENST00000311895 TMEM266Q2M3C6 531 aa9.81□□□□□ -0.84
ERCC4-201ENST00000311895 DDX46Q7L014 1031 aaKnown RBP9.81□□□□□ -0.84
ERCC4-201ENST00000311895 POLA1P09884 1462 aaPredicted RBP9.81□□□□□ -0.84
ERCC4-201ENST00000311895 GRIN2BQ13224 1484 aa9.81□□□□□ -0.84
ERCC4-201ENST00000311895 KLHL40Q2TBA0 621 aa9.81□□□□□ -0.84
ERCC4-201ENST00000311895 PI4KAP2A4QPH2 592 aa9.81□□□□□ -0.84
ERCC4-201ENST00000311895 PI4KAP1Q8N8J0 262 aa9.81□□□□□ -0.84
ERCC4-201ENST00000311895 ZMYND15Q9H091 742 aa9.81□□□□□ -0.84
ERCC4-201ENST00000311895 TTC12Q9H892 705 aaPredicted RBP9.81□□□□□ -0.84
ERCC4-201ENST00000311895 PCDHB15Q9Y5E8 787 aa9.81□□□□□ -0.84
ERCC4-201ENST00000311895 HECW1Q76N89 1606 aa9.81□□□□□ -0.84
ERCC4-201ENST00000311895 ZSCAN22P10073 491 aaPredicted RBP9.81□□□□□ -0.84
ERCC4-201ENST00000311895 UBASH3AP57075 661 aa9.81□□□□□ -0.84
ERCC4-201ENST00000311895 ZPR1O75312 459 aa9.81□□□□□ -0.84
ERCC4-201ENST00000311895 NF2P35240 595 aa9.81□□□□□ -0.84
ERCC4-201ENST00000311895 ANKLE2Q86XL3 938 aa9.81□□□□□ -0.84
ERCC4-201ENST00000311895 ZNF287Q9HBT7 754 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms