RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 CHMP4AQ9BY43 222 aa12.54□□□□□ -0.4
CHRNA9-201ENST00000310169 KLHL34Q8N239 644 aa12.53□□□□□ -0.4
CHRNA9-201ENST00000310169 ERBB4Q15303 1308 aa12.53□□□□□ -0.4
CHRNA9-201ENST00000310169 LRP5O75197 1615 aa12.52□□□□□ -0.4
CHRNA9-201ENST00000310169 TCERG1O14776 1098 aaKnown RBP12.52□□□□□ -0.41
CHRNA9-201ENST00000310169 MMP10P09238 476 aa12.52□□□□□ -0.41
CHRNA9-201ENST00000310169 SGIP1Q9BQI5 828 aa12.52□□□□□ -0.41
CHRNA9-201ENST00000310169 SPINK5Q9NQ38 1064 aaPredicted RBP12.52□□□□□ -0.41
CHRNA9-201ENST00000310169 DBF4Q9UBU7 674 aaPredicted RBP12.52□□□□□ -0.41
CHRNA9-201ENST00000310169 ZNF521Q96K83 1311 aa12.52□□□□□ -0.41
CHRNA9-201ENST00000310169 ANXA1P04083 346 aa12.51□□□□□ -0.41
CHRNA9-201ENST00000310169 TWISTNBQ3B726 338 aaPredicted RBP12.51□□□□□ -0.41
CHRNA9-201ENST00000310169 B4GALNT3Q6L9W6 998 aa12.51□□□□□ -0.41
CHRNA9-201ENST00000310169 KIF6Q6ZMV9 814 aa12.51□□□□□ -0.41
CHRNA9-201ENST00000310169 TSPYL6Q8N831 410 aa12.51□□□□□ -0.41
CHRNA9-201ENST00000310169 CHPF2Q9P2E5 772 aa12.51□□□□□ -0.41
CHRNA9-201ENST00000310169 ZBTB47Q9UFB7 747 aaPredicted RBP12.51□□□□□ -0.41
CHRNA9-201ENST00000310169 E9PSI1 815 aa12.51□□□□□ -0.41
CHRNA9-201ENST00000310169 AIMP1Q12904 312 aaKnown RBP12.51□□□□□ -0.41
CHRNA9-201ENST00000310169 CCDC30Q5VVM6 783 aa12.51□□□□□ -0.41
CHRNA9-201ENST00000310169 DDX21Q9NR30 783 aaKnown RBP eCLIP12.51□□□□□ -0.41
CHRNA9-201ENST00000310169 ZNF652Q9Y2D9 606 aa12.51□□□□□ -0.41
CHRNA9-201ENST00000310169 PARP3Q9Y6F1 533 aa12.51□□□□□ -0.41
CHRNA9-201ENST00000310169 IRX6P78412 446 aaPredicted RBP12.5□□□□□ -0.41
CHRNA9-201ENST00000310169 EXOSC9Q06265 439 aaKnown RBP12.5□□□□□ -0.41
CHRNA9-201ENST00000310169 BICDL1Q6ZP65 573 aa12.5□□□□□ -0.41
CHRNA9-201ENST00000310169 PDIA6Q15084 440 aa12.5□□□□□ -0.41
CHRNA9-201ENST00000310169 PROSER3Q2NL68 480 aa12.5□□□□□ -0.41
CHRNA9-201ENST00000310169 CAMTA2O94983 1202 aa12.49□□□□□ -0.41
CHRNA9-201ENST00000310169 STK31Q9BXU1 1019 aa12.49□□□□□ -0.41
CHRNA9-201ENST00000310169 HYPKQ9NX55 129 aa12.49□□□□□ -0.41
CHRNA9-201ENST00000310169 TTLL7Q6ZT98 887 aa12.49□□□□□ -0.41
CHRNA9-201ENST00000310169 COPS6Q7L5N1 327 aa12.49□□□□□ -0.41
CHRNA9-201ENST00000310169 FHDC1Q9C0D6 1143 aaPredicted RBP12.49□□□□□ -0.41
CHRNA9-201ENST00000310169 ZBTB3Q9H5J0 574 aa12.49□□□□□ -0.41
CHRNA9-201ENST00000310169 BCL2L12Q9HB09 334 aa12.49□□□□□ -0.41
CHRNA9-201ENST00000310169 UTRNP46939 3433 aa12.49□□□□□ -0.41
CHRNA9-201ENST00000310169 NPHP1O15259 732 aa12.48□□□□□ -0.41
CHRNA9-201ENST00000310169 SLFN5Q08AF3 891 aa12.48□□□□□ -0.41
CHRNA9-201ENST00000310169 NFIXQ14938 502 aa12.48□□□□□ -0.41
CHRNA9-201ENST00000310169 CLEC4GQ6UXB4 293 aa12.48□□□□□ -0.41
CHRNA9-201ENST00000310169 XAGE3Q8WTP9 111 aa12.48□□□□□ -0.41
CHRNA9-201ENST00000310169 CDCA7LQ96GN5 454 aa12.48□□□□□ -0.41
CHRNA9-201ENST00000310169 SETDB2Q96T68 719 aa12.48□□□□□ -0.41
CHRNA9-201ENST00000310169 COL24A1Q17RW2 1714 aa12.48□□□□□ -0.41
CHRNA9-201ENST00000310169 TM4SF1P30408 202 aa12.48□□□□□ -0.41
CHRNA9-201ENST00000310169 TBC1D9BQ66K14 1250 aa12.48□□□□□ -0.41
CHRNA9-201ENST00000310169 MAP3K15Q6ZN16 1313 aa12.47□□□□□ -0.41
CHRNA9-201ENST00000310169 ERVV-1B6SEH8 477 aa12.47□□□□□ -0.41
CHRNA9-201ENST00000310169 VAMP4O75379 141 aa12.46□□□□□ -0.41
CHRNA9-201ENST00000310169 HLFQ16534 295 aa12.46□□□□□ -0.41
CHRNA9-201ENST00000310169 SYT17Q9BSW7 474 aa12.46□□□□□ -0.41
CHRNA9-201ENST00000310169 SLC4A2P04920 1241 aa12.46□□□□□ -0.42
CHRNA9-201ENST00000310169 LRP10Q7Z4F1 713 aa12.46□□□□□ -0.42
CHRNA9-201ENST00000310169 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.46□□□□□ -0.42
CHRNA9-201ENST00000310169 NIP7Q9Y221 180 aaKnown RBP eCLIP12.46□□□□□ -0.42
CHRNA9-201ENST00000310169 POLRMTO00411 1230 aaKnown RBP12.45□□□□□ -0.42
CHRNA9-201ENST00000310169 SERPINB2P05120 415 aa12.45□□□□□ -0.42
CHRNA9-201ENST00000310169 DDR1Q08345 913 aa12.45□□□□□ -0.42
CHRNA9-201ENST00000310169 ANKRD13DQ6ZTN6 518 aa12.45□□□□□ -0.42
CHRNA9-201ENST00000310169 SCN7AQ01118 1682 aa12.45□□□□□ -0.42
CHRNA9-201ENST00000310169 NUP98P52948 1817 aa12.45□□□□□ -0.42
CHRNA9-201ENST00000310169 PHAXQ9H814 394 aaKnown RBP12.45□□□□□ -0.42
CHRNA9-201ENST00000310169 CD2APQ9Y5K6 639 aa12.45□□□□□ -0.42
CHRNA9-201ENST00000310169 BCORQ6W2J9 1755 aa12.44□□□□□ -0.42
CHRNA9-201ENST00000310169 FAM177BA6PVY3 158 aa12.44□□□□□ -0.42
CHRNA9-201ENST00000310169 RGL2O15211 777 aa12.44□□□□□ -0.42
CHRNA9-201ENST00000310169 GIGYF2Q6Y7W6 1299 aaKnown RBP12.44□□□□□ -0.42
CHRNA9-201ENST00000310169 RIC3Q7Z5B4 369 aa12.44□□□□□ -0.42
CHRNA9-201ENST00000310169 DDRGK1Q96HY6 314 aa12.44□□□□□ -0.42
CHRNA9-201ENST00000310169 CARMIL3Q8ND23 1372 aa12.44□□□□□ -0.42
CHRNA9-201ENST00000310169 CACNA1FO60840 1977 aa12.44□□□□□ -0.42
CHRNA9-201ENST00000310169 DDX58O95786 925 aaKnown RBP12.44□□□□□ -0.42
CHRNA9-201ENST00000310169 GPTP24298 496 aa12.44□□□□□ -0.42
CHRNA9-201ENST00000310169 GTF2E1P29083 439 aaPredicted RBP12.44□□□□□ -0.42
CHRNA9-201ENST00000310169 NBPF5PQ86XG9 351 aaPredicted RBP12.44□□□□□ -0.42
CHRNA9-201ENST00000310169 PLBD2Q8NHP8 589 aa12.44□□□□□ -0.42
CHRNA9-201ENST00000310169 HSP90AB3PQ58FF7 597 aa12.43□□□□□ -0.42
CHRNA9-201ENST00000310169 DCAF8L1A6NGE4 600 aa12.42□□□□□ -0.42
CHRNA9-201ENST00000310169 TPTE2Q6XPS3 522 aa12.42□□□□□ -0.42
CHRNA9-201ENST00000310169 CNBD1Q8NA66 436 aa12.42□□□□□ -0.42
CHRNA9-201ENST00000310169 AFDNP55196 1824 aaKnown RBP12.42□□□□□ -0.42
CHRNA9-201ENST00000310169 TRMT2AQ8IZ69 625 aaKnown RBP12.42□□□□□ -0.42
CHRNA9-201ENST00000310169 ST5P78524 1137 aa12.41□□□□□ -0.42
CHRNA9-201ENST00000310169 NLGN2Q8NFZ4 835 aa12.41□□□□□ -0.42
CHRNA9-201ENST00000310169 FKBP5Q13451 457 aaPredicted RBP12.41□□□□□ -0.42
CHRNA9-201ENST00000310169 TCIRG1Q13488 830 aa12.41□□□□□ -0.42
CHRNA9-201ENST00000310169 CCDC24Q8N4L8 307 aa12.41□□□□□ -0.42
CHRNA9-201ENST00000310169 TGFB2P61812 414 aa12.4□□□□□ -0.42
CHRNA9-201ENST00000310169 FLIIQ13045 1269 aa12.4□□□□□ -0.42
CHRNA9-201ENST00000310169 PPP1R42Q7Z4L9 355 aa12.4□□□□□ -0.42
CHRNA9-201ENST00000310169 NYXQ9GZU5 481 aa12.4□□□□□ -0.42
CHRNA9-201ENST00000310169 PI4KAP2A4QPH2 592 aa12.4□□□□□ -0.42
CHRNA9-201ENST00000310169 RRP1P56182 461 aaKnown RBP12.4□□□□□ -0.42
CHRNA9-201ENST00000310169 PARP10Q53GL7 1025 aa12.4□□□□□ -0.42
CHRNA9-201ENST00000310169 PRR5LQ6MZQ0 368 aa12.4□□□□□ -0.42
CHRNA9-201ENST00000310169 G2E3Q7L622 706 aa12.4□□□□□ -0.42
CHRNA9-201ENST00000310169 ZNF34Q8IZ26 560 aa12.4□□□□□ -0.42
CHRNA9-201ENST00000310169 PI4KAP1Q8N8J0 262 aa12.4□□□□□ -0.42
CHRNA9-201ENST00000310169 ZNF428Q96B54 188 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms