RNA–Protein interactions for RNA: ENST00000308091.8

RAPH1-201, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPH1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-201ENST00000308091 NBPF4Q96M43 638 aa22.36■■□□□ 1.17
RAPH1-201ENST00000308091 PXDNLA1KZ92 1463 aa22.36■■□□□ 1.17
RAPH1-201ENST00000308091 LARGE1O95461 756 aa22.35■■□□□ 1.17
RAPH1-201ENST00000308091 CNTROBQ8N137 903 aa22.35■■□□□ 1.17
RAPH1-201ENST00000308091 MYRIPQ8NFW9 859 aa22.35■■□□□ 1.17
RAPH1-201ENST00000308091 TTC14Q96N46 770 aa22.35■■□□□ 1.17
RAPH1-201ENST00000308091 SYAP1Q96A49 352 aaPredicted RBP22.35■■□□□ 1.17
RAPH1-201ENST00000308091 SETD1BQ9UPS6 1966 aaKnown RBP22.35■■□□□ 1.17
RAPH1-201ENST00000308091 USP25Q9UHP3 1055 aa22.34■■□□□ 1.17
RAPH1-201ENST00000308091 CASTP20810 708 aaKnown RBP22.33■■□□□ 1.17
RAPH1-201ENST00000308091 MCM5P33992 734 aa22.33■■□□□ 1.17
RAPH1-201ENST00000308091 PA2G4Q9UQ80 394 aaKnown RBP22.33■■□□□ 1.17
RAPH1-201ENST00000308091 SYT1P21579 422 aa22.33■■□□□ 1.17
RAPH1-201ENST00000308091 PTH1RQ03431 593 aa22.33■■□□□ 1.16
RAPH1-201ENST00000308091 MPRIPQ6WCQ1 1025 aa22.33■■□□□ 1.16
RAPH1-201ENST00000308091 BABAM1Q9NWV8 329 aa22.33■■□□□ 1.16
RAPH1-201ENST00000308091 FIBPO43427 364 aa22.32■■□□□ 1.16
RAPH1-201ENST00000308091 LRRC59Q96AG4 307 aaKnown RBP22.32■■□□□ 1.16
RAPH1-201ENST00000308091 ZSCAN22P10073 491 aaPredicted RBP22.32■■□□□ 1.16
RAPH1-201ENST00000308091 ADCK5Q3MIX3 580 aa22.32■■□□□ 1.16
RAPH1-201ENST00000308091 CACNA1FO60840 1977 aa22.31■■□□□ 1.16
RAPH1-201ENST00000308091 BCL11BQ9C0K0 894 aaPredicted RBP22.31■■□□□ 1.16
RAPH1-201ENST00000308091 LIMCH1Q9UPQ0 1083 aa22.31■■□□□ 1.16
RAPH1-201ENST00000308091 CEMIPQ8WUJ3 1361 aa22.31■■□□□ 1.16
RAPH1-201ENST00000308091 STX6O43752 255 aa22.31■■□□□ 1.16
RAPH1-201ENST00000308091 CCDC83Q8IWF9 413 aa22.31■■□□□ 1.16
RAPH1-201ENST00000308091 DIAPH3Q9NSV4 1193 aa22.31■■□□□ 1.16
RAPH1-201ENST00000308091 ADCY9O60503 1353 aa22.3■■□□□ 1.16
RAPH1-201ENST00000308091 FGD1P98174 961 aa22.3■■□□□ 1.16
RAPH1-201ENST00000308091 NOLC1Q14978 699 aaKnown RBP eCLIP22.3■■□□□ 1.16
RAPH1-201ENST00000308091 PROSER3Q2NL68 480 aa22.3■■□□□ 1.16
RAPH1-201ENST00000308091 SMC3Q9UQE7 1217 aa22.3■■□□□ 1.16
RAPH1-201ENST00000308091 PRPF40BQ6NWY9 871 aaKnown RBP22.29■■□□□ 1.16
RAPH1-201ENST00000308091 BTBD11A6QL63 1104 aa22.29■■□□□ 1.16
RAPH1-201ENST00000308091 TEFQ10587 303 aa22.29■■□□□ 1.16
RAPH1-201ENST00000308091 MARF1Q9Y4F3 1742 aaKnown RBP22.29■■□□□ 1.16
RAPH1-201ENST00000308091 PRAMEF22A3QJZ6 481 aa22.28■■□□□ 1.16
RAPH1-201ENST00000308091 HCLS1P14317 486 aaPredicted RBP22.28■■□□□ 1.16
RAPH1-201ENST00000308091 CWF19L2Q2TBE0 894 aaKnown RBP22.28■■□□□ 1.16
RAPH1-201ENST00000308091 JAKMIP1Q96N16 626 aaKnown RBP22.28■■□□□ 1.16
RAPH1-201ENST00000308091 PHF14O94880 888 aa22.28■■□□□ 1.16
RAPH1-201ENST00000308091 COL9A3Q14050 684 aaPredicted RBP22.28■■□□□ 1.16
RAPH1-201ENST00000308091 EPB41L2O43491 1005 aaKnown RBP22.27■■□□□ 1.16
RAPH1-201ENST00000308091 ZNF530Q6P9A1 599 aaPredicted RBP22.27■■□□□ 1.16
RAPH1-201ENST00000308091 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.27■■□□□ 1.16
RAPH1-201ENST00000308091 KIF13AQ9H1H9 1805 aa22.27■■□□□ 1.16
RAPH1-201ENST00000308091 GLRX3O76003 335 aaKnown RBP22.27■■□□□ 1.16
RAPH1-201ENST00000308091 HYPKQ9NX55 129 aa22.27■■□□□ 1.16
RAPH1-201ENST00000308091 MAP3K2Q9Y2U5 619 aa22.27■■□□□ 1.16
RAPH1-201ENST00000308091 N4BP2Q86UW6 1770 aaPredicted RBP22.27■■□□□ 1.16
RAPH1-201ENST00000308091 F13A1P00488 732 aa22.27■■□□□ 1.15
RAPH1-201ENST00000308091 UTP14CQ5TAP6 766 aaKnown RBP22.27■■□□□ 1.15
RAPH1-201ENST00000308091 CLASRPQ8N2M8 674 aaKnown RBP22.27■■□□□ 1.15
RAPH1-201ENST00000308091 IP6K1Q92551 441 aa22.27■■□□□ 1.15
RAPH1-201ENST00000308091 C9orf78Q9NZ63 289 aaPredicted RBP22.27■■□□□ 1.15
RAPH1-201ENST00000308091 U2AF2P26368 475 aaKnown RBP eCLIP22.26■■□□□ 1.152e-13■■■□□ 15.5
RAPH1-201ENST00000308091 CCDC183Q5T5S1 534 aa22.26■■□□□ 1.15
RAPH1-201ENST00000308091 BCL2L12Q9HB09 334 aa22.26■■□□□ 1.15
RAPH1-201ENST00000308091 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.26■■□□□ 1.15
RAPH1-201ENST00000308091 GJB2P29033 226 aa22.26■■□□□ 1.15
RAPH1-201ENST00000308091 TMEM87AQ8NBN3 555 aa22.26■■□□□ 1.15
RAPH1-201ENST00000308091 DNM1Q05193 864 aaKnown RBP22.25■■□□□ 1.15
RAPH1-201ENST00000308091 NECAB1Q8N987 351 aa22.25■■□□□ 1.15
RAPH1-201ENST00000308091 BBXQ8WY36 941 aaPredicted RBP22.25■■□□□ 1.15
RAPH1-201ENST00000308091 PDRG1Q9NUG6 133 aa22.25■■□□□ 1.15
RAPH1-201ENST00000308091 PHF8Q9UPP1 1060 aa22.25■■□□□ 1.15
RAPH1-201ENST00000308091 KIF3AQ9Y496 699 aa22.25■■□□□ 1.15
RAPH1-201ENST00000308091 HSP90AB4PQ58FF6 505 aa22.24■■□□□ 1.15
RAPH1-201ENST00000308091 ARHGAP23Q9P227 1491 aa22.24■■□□□ 1.15
RAPH1-201ENST00000308091 GIMAP6Q6P9H5 292 aa22.24■■□□□ 1.15
RAPH1-201ENST00000308091 THEMISQ8N1K5 641 aaPredicted RBP22.24■■□□□ 1.15
RAPH1-201ENST00000308091 ECHDC1Q9NTX5 307 aa22.24■■□□□ 1.15
RAPH1-201ENST00000308091 SLIT1O75093 1534 aa22.23■■□□□ 1.15
RAPH1-201ENST00000308091 IFIT2P09913 472 aaKnown RBP22.23■■□□□ 1.15
RAPH1-201ENST00000308091 ST3GAL1Q11201 340 aa22.23■■□□□ 1.15
RAPH1-201ENST00000308091 AACSQ86V21 672 aa22.23■■□□□ 1.15
RAPH1-201ENST00000308091 FAM227BQ96M60 508 aa22.23■■□□□ 1.15
RAPH1-201ENST00000308091 ANKARQ7Z5J8 1434 aa22.23■■□□□ 1.15
RAPH1-201ENST00000308091 TTC41PQ6P2S7 1318 aa22.23■■□□□ 1.15
RAPH1-201ENST00000308091 VPS37CA5D8V6 355 aaPredicted RBP22.23■■□□□ 1.15
RAPH1-201ENST00000308091 ADCY5O95622 1261 aa22.23■■□□□ 1.15
RAPH1-201ENST00000308091 UBE2HP62256 183 aa22.23■■□□□ 1.15
RAPH1-201ENST00000308091 PIBF1Q8WXW3 757 aa22.23■■□□□ 1.15
RAPH1-201ENST00000308091 USP42Q9H9J4 1324 aaKnown RBP22.22■■□□□ 1.15
RAPH1-201ENST00000308091 TCEANC2Q96MN5 208 aa22.22■■□□□ 1.15
RAPH1-201ENST00000308091 MTMR6Q9Y217 621 aa22.22■■□□□ 1.15
RAPH1-201ENST00000308091 DBF4Q9UBU7 674 aaPredicted RBP22.21■■□□□ 1.15
RAPH1-201ENST00000308091 HOXB7P09629 217 aa22.21■■□□□ 1.15
RAPH1-201ENST00000308091 AIMP1Q12904 312 aaKnown RBP22.21■■□□□ 1.15
RAPH1-201ENST00000308091 ME3Q16798 604 aa22.21■■□□□ 1.15
RAPH1-201ENST00000308091 CCDC8Q9H0W5 538 aaPredicted RBP22.21■■□□□ 1.15
RAPH1-201ENST00000308091 PDCL2Q8N4E4 241 aa22.21■■□□□ 1.15
RAPH1-201ENST00000308091 RUFY2Q8WXA3 655 aa22.21■■□□□ 1.15
RAPH1-201ENST00000308091 ZBTB22O15209 634 aa22.2■■□□□ 1.14
RAPH1-201ENST00000308091 SIL1Q9H173 461 aa22.2■■□□□ 1.14
RAPH1-201ENST00000308091 TLR7Q9NYK1 1049 aaKnown RBP22.2■■□□□ 1.14
RAPH1-201ENST00000308091 CHMP3Q9Y3E7 222 aa22.2■■□□□ 1.14
RAPH1-201ENST00000308091 CYP46A1Q9Y6A2 500 aa22.2■■□□□ 1.14
RAPH1-201ENST00000308091 KCNJ4P48050 445 aa22.2■■□□□ 1.14
RAPH1-201ENST00000308091 MTX1Q13505 466 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms