RNA–Protein interactions for RNA: ENST00000304523.9

LDB2-201, Transcript of LIM domain binding 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB2, Length 2,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-201ENST00000304523 ZHX1Q9UKY1 873 aaPredicted RBP11.28□□□□□ -0.6
LDB2-201ENST00000304523 SURF6O75683 361 aaKnown RBP11.28□□□□□ -0.6
LDB2-201ENST00000304523 CASTP20810 708 aaKnown RBP11.28□□□□□ -0.6
LDB2-201ENST00000304523 SYCP1Q15431 976 aa11.28□□□□□ -0.6
LDB2-201ENST00000304523 ZSWIM6Q9HCJ5 1215 aa11.28□□□□□ -0.6
LDB2-201ENST00000304523 TTC41PQ6P2S7 1318 aa11.27□□□□□ -0.6
LDB2-201ENST00000304523 MAP4K4O95819 1239 aaPredicted RBP11.27□□□□□ -0.61
LDB2-201ENST00000304523 ST3GAL1Q11201 340 aa11.27□□□□□ -0.61
LDB2-201ENST00000304523 ROBO2Q9HCK4 1378 aa11.27□□□□□ -0.61
LDB2-201ENST00000304523 PLCB2Q00722 1185 aa11.27□□□□□ -0.61
LDB2-201ENST00000304523 CCDC83Q8IWF9 413 aa11.27□□□□□ -0.61
LDB2-201ENST00000304523 FEZ1Q99689 392 aa11.27□□□□□ -0.61
LDB2-201ENST00000304523 LARP6Q9BRS8 491 aaKnown RBP11.27□□□□□ -0.61
LDB2-201ENST00000304523 CWC27Q6UX04 472 aaKnown RBP11.26□□□□□ -0.61
LDB2-201ENST00000304523 EYA1Q99502 592 aa11.26□□□□□ -0.61
LDB2-201ENST00000304523 PDRG1Q9NUG6 133 aa11.26□□□□□ -0.61
LDB2-201ENST00000304523 SPG7Q9UQ90 795 aa11.26□□□□□ -0.61
LDB2-201ENST00000304523 MRVI1Q9Y6F6 885 aa11.26□□□□□ -0.61
LDB2-201ENST00000304523 PTPRUQ92729 1446 aa11.26□□□□□ -0.61
LDB2-201ENST00000304523 ADGRL3Q9HAR2 1447 aa11.26□□□□□ -0.61
LDB2-201ENST00000304523 TTC21AQ8NDW8 1320 aa11.26□□□□□ -0.61
LDB2-201ENST00000304523 GLRX3O76003 335 aaKnown RBP11.26□□□□□ -0.61
LDB2-201ENST00000304523 CPA1P15085 419 aa11.26□□□□□ -0.61
LDB2-201ENST00000304523 MAP3K11Q16584 847 aa11.26□□□□□ -0.61
LDB2-201ENST00000304523 RBM43Q6ZSC3 357 aaKnown RBP11.26□□□□□ -0.61
LDB2-201ENST00000304523 TTC6Q86TZ1 520 aa11.26□□□□□ -0.61
LDB2-201ENST00000304523 SPC24Q8NBT2 197 aa11.26□□□□□ -0.61
LDB2-201ENST00000304523 NWD1Q149M9 1564 aa11.25□□□□□ -0.61
LDB2-201ENST00000304523 GNAT3A8MTJ3 354 aa11.25□□□□□ -0.61
LDB2-201ENST00000304523 PTGS1P23219 599 aa11.25□□□□□ -0.61
LDB2-201ENST00000304523 KRT85P78386 507 aa11.25□□□□□ -0.61
LDB2-201ENST00000304523 TYRO3Q06418 890 aa11.25□□□□□ -0.61
LDB2-201ENST00000304523 ADCK5Q3MIX3 580 aa11.25□□□□□ -0.61
LDB2-201ENST00000304523 HSP90AB4PQ58FF6 505 aa11.25□□□□□ -0.61
LDB2-201ENST00000304523 RUFY2Q8WXA3 655 aa11.25□□□□□ -0.61
LDB2-201ENST00000304523 NUP62CLQ9H1M0 184 aa11.25□□□□□ -0.61
LDB2-201ENST00000304523 DNAJC5Q9H3Z4 198 aa11.25□□□□□ -0.61
LDB2-201ENST00000304523 CYP46A1Q9Y6A2 500 aa11.25□□□□□ -0.61
LDB2-201ENST00000304523 SRGAP3O43295 1099 aa11.25□□□□□ -0.61
LDB2-201ENST00000304523 ME3Q16798 604 aa11.25□□□□□ -0.61
LDB2-201ENST00000304523 TPRNQ4KMQ1 711 aa11.25□□□□□ -0.61
LDB2-201ENST00000304523 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.25□□□□□ -0.61
LDB2-201ENST00000304523 JAKMIP1Q96N16 626 aaKnown RBP11.25□□□□□ -0.61
LDB2-201ENST00000304523 PTH1RQ03431 593 aa11.24□□□□□ -0.61
LDB2-201ENST00000304523 NCBP1Q09161 790 aaKnown RBP11.24□□□□□ -0.61
LDB2-201ENST00000304523 NECTIN1Q15223 517 aa11.24□□□□□ -0.61
LDB2-201ENST00000304523 VPS37CA5D8V6 355 aaPredicted RBP11.24□□□□□ -0.61
LDB2-201ENST00000304523 SMTNL1A8MU46 457 aa11.24□□□□□ -0.61
LDB2-201ENST00000304523 U2AF2P26368 475 aaKnown RBP eCLIP11.24□□□□□ -0.61
LDB2-201ENST00000304523 PLA2G4DQ86XP0 818 aa11.24□□□□□ -0.61
LDB2-201ENST00000304523 NECTIN2Q92692 538 aa11.24□□□□□ -0.61
LDB2-201ENST00000304523 PIK3C2AO00443 1686 aa11.23□□□□□ -0.61
LDB2-201ENST00000304523 LIG1P18858 919 aa11.23□□□□□ -0.61
LDB2-201ENST00000304523 TAF7Q15545 349 aaPredicted RBP11.23□□□□□ -0.61
LDB2-201ENST00000304523 LUZP1Q86V48 1076 aa11.23□□□□□ -0.61
LDB2-201ENST00000304523 IL17REQ8NFR9 667 aa11.23□□□□□ -0.61
LDB2-201ENST00000304523 ADAMTS13Q76LX8 1427 aa11.23□□□□□ -0.61
LDB2-201ENST00000304523 NBPF7P0C2Y1 421 aaPredicted RBP11.23□□□□□ -0.61
LDB2-201ENST00000304523 PDCP20941 246 aa11.23□□□□□ -0.61
LDB2-201ENST00000304523 MTX1Q13505 466 aa11.23□□□□□ -0.61
LDB2-201ENST00000304523 PRPF40BQ6NWY9 871 aaKnown RBP11.23□□□□□ -0.61
LDB2-201ENST00000304523 TDRD7Q8NHU6 1098 aaKnown RBP11.23□□□□□ -0.61
LDB2-201ENST00000304523 PHAXQ9H814 394 aaKnown RBP11.23□□□□□ -0.61
LDB2-201ENST00000304523 CBX8Q9HC52 389 aa11.23□□□□□ -0.61
LDB2-201ENST00000304523 MED1Q15648 1581 aaPredicted RBP11.22□□□□□ -0.61
LDB2-201ENST00000304523 NPHP3Q7Z494 1330 aa11.22□□□□□ -0.61
LDB2-201ENST00000304523 KDM3BQ7LBC6 1761 aa11.22□□□□□ -0.61
LDB2-201ENST00000304523 SPDYE4A6NLX3 237 aa11.22□□□□□ -0.61
LDB2-201ENST00000304523 HDGFP51858 240 aaKnown RBP11.22□□□□□ -0.61
LDB2-201ENST00000304523 HDGFL1Q5TGJ6 251 aa11.22□□□□□ -0.61
LDB2-201ENST00000304523 LARP1BQ659C4 914 aaKnown RBP11.22□□□□□ -0.61
LDB2-201ENST00000304523 CDC37L1Q7L3B6 337 aa11.22□□□□□ -0.61
LDB2-201ENST00000304523 CCDC186Q7Z3E2 898 aa11.22□□□□□ -0.61
LDB2-201ENST00000304523 SCAND2PQ9GZW5 306 aaPredicted RBP11.22□□□□□ -0.61
LDB2-201ENST00000304523 SNRKQ9NRH2 765 aa11.22□□□□□ -0.61
LDB2-201ENST00000304523 DDX19AQ9NUU7 478 aaKnown RBP11.22□□□□□ -0.61
LDB2-201ENST00000304523 OGFRQ9NZT2 677 aa11.22□□□□□ -0.61
LDB2-201ENST00000304523 TPCN1Q9ULQ1 816 aa11.22□□□□□ -0.61
LDB2-201ENST00000304523 USP54Q70EL1 1684 aa11.22□□□□□ -0.61
LDB2-201ENST00000304523 UBR1Q8IWV7 1749 aa11.22□□□□□ -0.61
LDB2-201ENST00000304523 MARF1Q9Y4F3 1742 aaKnown RBP11.22□□□□□ -0.61
LDB2-201ENST00000304523 ZKSCAN1P17029 563 aaPredicted RBP11.22□□□□□ -0.61
LDB2-201ENST00000304523 ZNF75DP51815 510 aa11.22□□□□□ -0.61
LDB2-201ENST00000304523 BEND3Q5T5X7 828 aa11.22□□□□□ -0.61
LDB2-201ENST00000304523 ZSCAN25Q6NSZ9 544 aa11.22□□□□□ -0.61
LDB2-201ENST00000304523 TNMDQ9H2S6 317 aa11.22□□□□□ -0.61
LDB2-201ENST00000304523 PAXBP1Q9Y5B6 917 aa11.22□□□□□ -0.61
LDB2-201ENST00000304523 SOX12O15370 315 aa11.21□□□□□ -0.61
LDB2-201ENST00000304523 ANO6Q4KMQ2 910 aa11.21□□□□□ -0.61
LDB2-201ENST00000304523 ALDH8A1Q9H2A2 487 aaPredicted RBP11.21□□□□□ -0.61
LDB2-201ENST00000304523 CLSTN2Q9H4D0 955 aa11.21□□□□□ -0.61
LDB2-201ENST00000304523 ECHDC1Q9NTX5 307 aa11.21□□□□□ -0.61
LDB2-201ENST00000304523 DACT1Q9NYF0 836 aa11.21□□□□□ -0.61
LDB2-201ENST00000304523 CTNNA3Q9UI47 895 aa11.21□□□□□ -0.61
LDB2-201ENST00000304523 CDC25BP30305 580 aa11.2□□□□□ -0.62
LDB2-201ENST00000304523 LRMPQ12912 555 aa11.2□□□□□ -0.62
LDB2-201ENST00000304523 NECAB1Q8N987 351 aa11.2□□□□□ -0.62
LDB2-201ENST00000304523 MAP4K1Q92918 833 aa11.2□□□□□ -0.62
LDB2-201ENST00000304523 DIP2AQ14689 1571 aa11.2□□□□□ -0.62
LDB2-201ENST00000304523 DIP2BQ9P265 1576 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms