RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 ZEB2O60315 1214 aa10.44□□□□□ -0.74
SMC2-201ENST00000286398 FERP16591 822 aa10.44□□□□□ -0.74
SMC2-201ENST00000286398 GJB2P29033 226 aa10.44□□□□□ -0.74
SMC2-201ENST00000286398 LARP6Q9BRS8 491 aaKnown RBP10.44□□□□□ -0.74
SMC2-201ENST00000286398 FEZ2Q9UHY8 353 aaPredicted RBP10.44□□□□□ -0.74
SMC2-201ENST00000286398 ZBTB16Q05516 673 aa10.44□□□□□ -0.74
SMC2-201ENST00000286398 FAM200AQ8TCP9 573 aa10.44□□□□□ -0.74
SMC2-201ENST00000286398 GOLGA1Q92805 767 aa10.44□□□□□ -0.74
SMC2-201ENST00000286398 FAM114A2Q9NRY5 505 aa10.44□□□□□ -0.74
SMC2-201ENST00000286398 RBM28Q9NW13 759 aaKnown RBP10.44□□□□□ -0.74
SMC2-201ENST00000286398 ZWINTO95229 277 aa10.44□□□□□ -0.74
SMC2-201ENST00000286398 HMGB1P09429 215 aaKnown RBP10.44□□□□□ -0.74
SMC2-201ENST00000286398 CCDC82Q8N4S0 544 aa10.44□□□□□ -0.74
SMC2-201ENST00000286398 SMC6Q96SB8 1091 aa10.44□□□□□ -0.74
SMC2-201ENST00000286398 TUBB4AP04350 444 aa10.43□□□□□ -0.74
SMC2-201ENST00000286398 RAB34Q9BZG1 259 aa10.43□□□□□ -0.74
SMC2-201ENST00000286398 SCAPERQ9BY12 1400 aa10.43□□□□□ -0.74
SMC2-201ENST00000286398 CCDC40Q4G0X9 1142 aa10.43□□□□□ -0.74
SMC2-201ENST00000286398 CCDC102BQ68D86 513 aa10.43□□□□□ -0.74
SMC2-201ENST00000286398 CPLX4Q7Z7G2 160 aa10.43□□□□□ -0.74
SMC2-201ENST00000286398 ARFGAP2Q8N6H7 521 aa10.43□□□□□ -0.74
SMC2-201ENST00000286398 CEP120Q8N960 986 aa10.43□□□□□ -0.74
SMC2-201ENST00000286398 TBC1D32Q96NH3 1257 aa10.43□□□□□ -0.74
SMC2-201ENST00000286398 LRP2BPQ9P2M1 347 aa10.43□□□□□ -0.74
SMC2-201ENST00000286398 CLNS1AP54105 237 aaKnown RBP10.43□□□□□ -0.74
SMC2-201ENST00000286398 ZBTB9Q96C00 473 aa10.43□□□□□ -0.74
SMC2-201ENST00000286398 STIM2Q9P246 746 aa10.43□□□□□ -0.74
SMC2-201ENST00000286398 TCERG1LQ5VWI1 586 aa10.43□□□□□ -0.74
SMC2-201ENST00000286398 RBM42Q9BTD8 480 aaKnown RBP10.43□□□□□ -0.74
SMC2-201ENST00000286398 SLC12A5Q9H2X9 1139 aa10.43□□□□□ -0.74
SMC2-201ENST00000286398 HS1BP3Q53T59 392 aa10.43□□□□□ -0.74
SMC2-201ENST00000286398 CFAP70Q5T0N1 1121 aa10.43□□□□□ -0.74
SMC2-201ENST00000286398 RPUSD2Q8IZ73 545 aaKnown RBP10.43□□□□□ -0.74
SMC2-201ENST00000286398 BANK1Q8NDB2 785 aa10.43□□□□□ -0.74
SMC2-201ENST00000286398 CYLC1P35663 651 aaPredicted RBP10.42□□□□□ -0.74
SMC2-201ENST00000286398 IFI16Q16666 785 aaKnown RBP10.42□□□□□ -0.74
SMC2-201ENST00000286398 SPTY2D1Q68D10 685 aaPredicted RBP10.42□□□□□ -0.74
SMC2-201ENST00000286398 PDE1CQ14123 709 aaPredicted RBP10.42□□□□□ -0.74
SMC2-201ENST00000286398 IQCGQ9H095 443 aaKnown RBP10.42□□□□□ -0.74
SMC2-201ENST00000286398 BOLA2Q9H3K6 86 aa10.42□□□□□ -0.74
SMC2-201ENST00000286398 IDEP14735 1019 aa10.42□□□□□ -0.74
SMC2-201ENST00000286398 CCT2P78371 535 aaKnown RBP10.42□□□□□ -0.74
SMC2-201ENST00000286398 CETN1Q12798 172 aa10.42□□□□□ -0.74
SMC2-201ENST00000286398 TTC14Q96N46 770 aa10.42□□□□□ -0.74
SMC2-201ENST00000286398 MYOM3Q5VTT5 1437 aa10.42□□□□□ -0.74
SMC2-201ENST00000286398 TRIM21P19474 475 aaKnown RBP10.42□□□□□ -0.74
SMC2-201ENST00000286398 ANO6Q4KMQ2 910 aa10.42□□□□□ -0.74
SMC2-201ENST00000286398 DNAJC21Q5F1R6 531 aaKnown RBP10.42□□□□□ -0.74
SMC2-201ENST00000286398 TMCO4Q5TGY1 634 aa10.42□□□□□ -0.74
SMC2-201ENST00000286398 RNF168Q8IYW5 571 aaPredicted RBP10.42□□□□□ -0.74
SMC2-201ENST00000286398 DDX12PQ92771 950 aa10.42□□□□□ -0.74
SMC2-201ENST00000286398 MYL6BP14649 208 aa10.42□□□□□ -0.74
SMC2-201ENST00000286398 TCHPQ9BT92 498 aa10.42□□□□□ -0.74
SMC2-201ENST00000286398 CTCFLQ8NI51 663 aaPredicted RBP10.41□□□□□ -0.74
SMC2-201ENST00000286398 CCDC77Q9BR77 488 aa10.41□□□□□ -0.74
SMC2-201ENST00000286398 COMMD10Q9Y6G5 202 aa10.41□□□□□ -0.74
SMC2-201ENST00000286398 GOLIM4O00461 696 aa10.41□□□□□ -0.74
SMC2-201ENST00000286398 ACTN2P35609 894 aa10.41□□□□□ -0.74
SMC2-201ENST00000286398 PIP4K2BP78356 416 aa10.41□□□□□ -0.74
SMC2-201ENST00000286398 KANK3Q6NY19 840 aa10.41□□□□□ -0.74
SMC2-201ENST00000286398 GOLGA8BA8MQT2 603 aa10.41□□□□□ -0.74
SMC2-201ENST00000286398 TBC1D9Q6ZT07 1266 aa10.41□□□□□ -0.74
SMC2-201ENST00000286398 PPFIBP2Q8ND30 876 aa10.41□□□□□ -0.74
SMC2-201ENST00000286398 GTF3C6Q969F1 213 aa10.41□□□□□ -0.74
SMC2-201ENST00000286398 SEC63Q9UGP8 760 aaKnown RBP10.41□□□□□ -0.74
SMC2-201ENST00000286398 CTAGE9A4FU28 777 aa10.41□□□□□ -0.74
SMC2-201ENST00000286398 TUBB4BP68371 445 aa10.41□□□□□ -0.74
SMC2-201ENST00000286398 TMEM266Q2M3C6 531 aa10.41□□□□□ -0.74
SMC2-201ENST00000286398 STMN4Q9H169 189 aaPredicted RBP10.41□□□□□ -0.74
SMC2-201ENST00000286398 CCDC194A0A1B0GVG4 234 aa10.4□□□□□ -0.74
SMC2-201ENST00000286398 RARSP54136 660 aaKnown RBP10.4□□□□□ -0.74
SMC2-201ENST00000286398 GRIPAP1Q4V328 841 aa10.4□□□□□ -0.74
SMC2-201ENST00000286398 CCDC129Q6ZRS4 1044 aa10.4□□□□□ -0.74
SMC2-201ENST00000286398 KRBA2Q6ZNG9 492 aa10.4□□□□□ -0.74
SMC2-201ENST00000286398 TSNARE1Q96NA8 513 aa10.4□□□□□ -0.74
SMC2-201ENST00000286398 ZNF530Q6P9A1 599 aaPredicted RBP10.4□□□□□ -0.74
SMC2-201ENST00000286398 SSH1Q8WYL5 1049 aa10.4□□□□□ -0.74
SMC2-201ENST00000286398 JPH4Q96JJ6 628 aa10.4□□□□□ -0.74
SMC2-201ENST00000286398 SELENOSQ9BQE4 189 aa10.4□□□□□ -0.74
SMC2-201ENST00000286398 PLVAPQ9BX97 442 aa10.4□□□□□ -0.74
SMC2-201ENST00000286398 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.4□□□□□ -0.741e-6■■■□□ 16.4
SMC2-201ENST00000286398 MINDY4BA8MYZ0 360 aa10.4□□□□□ -0.74
SMC2-201ENST00000286398 TUBBP07437 444 aa10.4□□□□□ -0.74
SMC2-201ENST00000286398 U2AF2P26368 475 aaKnown RBP eCLIP10.4□□□□□ -0.74
SMC2-201ENST00000286398 LACTBP83111 547 aaPredicted RBP10.4□□□□□ -0.74
SMC2-201ENST00000286398 BMP2KLQ5H9B9 411 aa10.4□□□□□ -0.74
SMC2-201ENST00000286398 ABTB2Q8N961 1025 aa10.4□□□□□ -0.74
SMC2-201ENST00000286398 NAPBQ9H115 298 aa10.4□□□□□ -0.74
SMC2-201ENST00000286398 ABCF2Q9UG63 623 aa10.4□□□□□ -0.74
SMC2-201ENST00000286398 ANKRD30BQ9BXX2 1392 aa10.4□□□□□ -0.74
SMC2-201ENST00000286398 TACC1O75410 805 aa10.4□□□□□ -0.75
SMC2-201ENST00000286398 POLR3DP05423 398 aaPredicted RBP10.4□□□□□ -0.75
SMC2-201ENST00000286398 SYT1P21579 422 aa10.4□□□□□ -0.75
SMC2-201ENST00000286398 FAM76AQ8TAV0 307 aa10.4□□□□□ -0.75
SMC2-201ENST00000286398 SLC12A7Q9Y666 1083 aa10.4□□□□□ -0.75
SMC2-201ENST00000286398 PRC1O43663 620 aa10.39□□□□□ -0.75
SMC2-201ENST00000286398 TRIM47Q96LD4 638 aa10.39□□□□□ -0.75
SMC2-201ENST00000286398 SPINK5Q9NQ38 1064 aaPredicted RBP10.39□□□□□ -0.75
SMC2-201ENST00000286398 GOLGA8AA7E2F4 631 aa10.39□□□□□ -0.75
SMC2-201ENST00000286398 UBA7P41226 1012 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms