RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 PHACTR3Q96KR7 559 aa11.7□□□□□ -0.54
PDCD4-201ENST00000280154 PRDM11Q9NQV5 511 aa11.7□□□□□ -0.54
PDCD4-201ENST00000280154 TUBGCP6Q96RT7 1819 aa11.7□□□□□ -0.54
PDCD4-201ENST00000280154 ANKRD36CQ5JPF3 1778 aa11.7□□□□□ -0.54
PDCD4-201ENST00000280154 CAPN15O75808 1086 aa11.69□□□□□ -0.54
PDCD4-201ENST00000280154 EPB41L2O43491 1005 aaKnown RBP11.69□□□□□ -0.54
PDCD4-201ENST00000280154 LARP1Q6PKG0 1096 aaKnown RBP11.69□□□□□ -0.54
PDCD4-201ENST00000280154 RGS12O14924 1447 aa11.69□□□□□ -0.54
PDCD4-201ENST00000280154 SCN7AQ01118 1682 aa11.69□□□□□ -0.54
PDCD4-201ENST00000280154 MS4A1P11836 297 aa11.69□□□□□ -0.54
PDCD4-201ENST00000280154 AKAP4Q5JQC9 854 aa11.69□□□□□ -0.54
PDCD4-201ENST00000280154 ZNF280DQ6N043 979 aa11.69□□□□□ -0.54
PDCD4-201ENST00000280154 RNF217Q8TC41 542 aa11.69□□□□□ -0.54
PDCD4-201ENST00000280154 BTG4Q9NY30 223 aa11.69□□□□□ -0.54
PDCD4-201ENST00000280154 TESPA1A2RU30 521 aaPredicted RBP11.68□□□□□ -0.54
PDCD4-201ENST00000280154 TERF1P54274 439 aa11.68□□□□□ -0.54
PDCD4-201ENST00000280154 GAS2L2Q8NHY3 880 aa11.68□□□□□ -0.54
PDCD4-201ENST00000280154 TCP11L2Q8N4U5 519 aa11.68□□□□□ -0.54
PDCD4-201ENST00000280154 PES1O00541 588 aaKnown RBP11.68□□□□□ -0.54
PDCD4-201ENST00000280154 MPHOSPH10O00566 681 aaKnown RBP11.68□□□□□ -0.54
PDCD4-201ENST00000280154 ZC3H6P61129 1189 aaKnown RBP11.68□□□□□ -0.54
PDCD4-201ENST00000280154 PCDH11XQ9BZA7 1347 aa11.68□□□□□ -0.54
PDCD4-201ENST00000280154 PCDH11YQ9BZA8 1340 aa11.68□□□□□ -0.54
PDCD4-201ENST00000280154 SUGT1Q9Y2Z0 365 aa11.67□□□□□ -0.54
PDCD4-201ENST00000280154 LAMB2P55268 1798 aa11.67□□□□□ -0.54
PDCD4-201ENST00000280154 MTHFSDQ2M296 383 aaKnown RBP11.67□□□□□ -0.54
PDCD4-201ENST00000280154 CCDC96Q2M329 555 aa11.67□□□□□ -0.54
PDCD4-201ENST00000280154 IPO8O15397 1037 aaKnown RBP11.67□□□□□ -0.54
PDCD4-201ENST00000280154 HSP90AB3PQ58FF7 597 aa11.67□□□□□ -0.54
PDCD4-201ENST00000280154 SKAP1Q86WV1 359 aa11.67□□□□□ -0.54
PDCD4-201ENST00000280154 PHKG2P15735 406 aa11.66□□□□□ -0.54
PDCD4-201ENST00000280154 PRKAR2BP31323 418 aa11.66□□□□□ -0.54
PDCD4-201ENST00000280154 MECOMQ03112 1051 aa11.66□□□□□ -0.54
PDCD4-201ENST00000280154 SULT6B1Q6IMI4 303 aa11.66□□□□□ -0.54
PDCD4-201ENST00000280154 AFF2P51816 1311 aa11.66□□□□□ -0.54
PDCD4-201ENST00000280154 UBR3Q6ZT12 1888 aa11.66□□□□□ -0.54
PDCD4-201ENST00000280154 IL2RBP14784 551 aa11.66□□□□□ -0.54
PDCD4-201ENST00000280154 TTC30BQ8N4P2 665 aa11.66□□□□□ -0.54
PDCD4-201ENST00000280154 MRVI1Q9Y6F6 885 aa11.66□□□□□ -0.54
PDCD4-201ENST00000280154 C4AP0C0L4 1744 aa11.66□□□□□ -0.54
PDCD4-201ENST00000280154 C4BP0C0L5 1744 aa11.66□□□□□ -0.54
PDCD4-201ENST00000280154 SCP2P22307 547 aa11.66□□□□□ -0.54
PDCD4-201ENST00000280154 WDR43Q15061 677 aaKnown RBP eCLIP11.66□□□□□ -0.54
PDCD4-201ENST00000280154 GIMAP6Q6P9H5 292 aa11.66□□□□□ -0.54
PDCD4-201ENST00000280154 NBPF11Q86T75 865 aa11.66□□□□□ -0.54
PDCD4-201ENST00000280154 HSCBQ8IWL3 235 aa11.65□□□□□ -0.54
PDCD4-201ENST00000280154 CASZ1Q86V15 1759 aa11.65□□□□□ -0.54
PDCD4-201ENST00000280154 SLFN5Q08AF3 891 aa11.65□□□□□ -0.54
PDCD4-201ENST00000280154 CHRNA2Q15822 529 aa11.65□□□□□ -0.54
PDCD4-201ENST00000280154 GJD4Q96KN9 370 aaPredicted RBP11.65□□□□□ -0.54
PDCD4-201ENST00000280154 CYP27B1O15528 508 aa11.65□□□□□ -0.55
PDCD4-201ENST00000280154 WDR78Q5VTH9 848 aa11.65□□□□□ -0.55
PDCD4-201ENST00000280154 ZNF772Q68DY9 489 aaPredicted RBP11.65□□□□□ -0.55
PDCD4-201ENST00000280154 ANKRD13AQ8IZ07 590 aa11.65□□□□□ -0.55
PDCD4-201ENST00000280154 TRPC5Q9UL62 973 aaPredicted RBP11.65□□□□□ -0.55
PDCD4-201ENST00000280154 CIZ1Q9ULV3 898 aaPredicted RBP11.65□□□□□ -0.55
PDCD4-201ENST00000280154 ERVV-2B6SEH9 535 aa11.64□□□□□ -0.55
PDCD4-201ENST00000280154 CHL1O00533 1208 aa11.64□□□□□ -0.55
PDCD4-201ENST00000280154 NME8Q8N427 588 aa11.64□□□□□ -0.55
PDCD4-201ENST00000280154 ACRBPQ8NEB7 543 aa11.64□□□□□ -0.55
PDCD4-201ENST00000280154 IFT57Q9NWB7 429 aa11.64□□□□□ -0.55
PDCD4-201ENST00000280154 ARFGEF2Q9Y6D5 1785 aa11.64□□□□□ -0.55
PDCD4-201ENST00000280154 DDRGK1Q96HY6 314 aa11.64□□□□□ -0.55
PDCD4-201ENST00000280154 FAM117AQ9C073 453 aa11.64□□□□□ -0.55
PDCD4-201ENST00000280154 G3BP2Q9UN86 482 aaKnown RBP11.64□□□□□ -0.55
PDCD4-201ENST00000280154 RPS6KL1Q9Y6S9 549 aa11.64□□□□□ -0.55
PDCD4-201ENST00000280154 NRXN2Q9P2S2 1712 aa11.64□□□□□ -0.55
PDCD4-201ENST00000280154 SSR1P43307 286 aaKnown RBP11.64□□□□□ -0.55
PDCD4-201ENST00000280154 U2AF1L5P0DN76 240 aaPredicted RBP11.63□□□□□ -0.55
PDCD4-201ENST00000280154 U2AF1Q01081 240 aaKnown RBP eCLIP11.63□□□□□ -0.55
PDCD4-201ENST00000280154 PLEKHO1Q53GL0 409 aaPredicted RBP11.63□□□□□ -0.55
PDCD4-201ENST00000280154 SPOCK3Q9BQ16 436 aa11.63□□□□□ -0.55
PDCD4-201ENST00000280154 MMP14P50281 582 aa11.63□□□□□ -0.55
PDCD4-201ENST00000280154 TSHZ1Q6ZSZ6 1077 aa11.63□□□□□ -0.55
PDCD4-201ENST00000280154 ZKSCAN2Q63HK3 967 aa11.62□□□□□ -0.55
PDCD4-201ENST00000280154 MTA3Q9BTC8 594 aa11.62□□□□□ -0.55
PDCD4-201ENST00000280154 TCERG1O14776 1098 aaKnown RBP11.62□□□□□ -0.55
PDCD4-201ENST00000280154 HSP90AB1P08238 724 aaKnown RBP11.62□□□□□ -0.55
PDCD4-201ENST00000280154 DUSP27Q5VZP5 1158 aa11.62□□□□□ -0.55
PDCD4-201ENST00000280154 IL17REQ8NFR9 667 aa11.62□□□□□ -0.55
PDCD4-201ENST00000280154 SPG7Q9UQ90 795 aa11.62□□□□□ -0.55
PDCD4-201ENST00000280154 PXDNLA1KZ92 1463 aa11.62□□□□□ -0.55
PDCD4-201ENST00000280154 WDHD1O75717 1129 aaPredicted RBP11.62□□□□□ -0.55
PDCD4-201ENST00000280154 DCAF5Q96JK2 942 aa11.62□□□□□ -0.55
PDCD4-201ENST00000280154 HOXB7P09629 217 aa11.61□□□□□ -0.55
PDCD4-201ENST00000280154 MAP2K1Q02750 393 aaPredicted RBP11.61□□□□□ -0.55
PDCD4-201ENST00000280154 PPP4R3CPQ6ZMV5 832 aa11.61□□□□□ -0.55
PDCD4-201ENST00000280154 USP21Q9UK80 565 aa11.61□□□□□ -0.55
PDCD4-201ENST00000280154 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.61□□□□□ -0.55
PDCD4-201ENST00000280154 GNAT3A8MTJ3 354 aa11.61□□□□□ -0.55
PDCD4-201ENST00000280154 BIN2Q9UBW5 565 aaPredicted RBP11.61□□□□□ -0.55
PDCD4-201ENST00000280154 RNMTO43148 476 aaKnown RBP11.61□□□□□ -0.55
PDCD4-201ENST00000280154 TATP17735 454 aaPredicted RBP11.61□□□□□ -0.55
PDCD4-201ENST00000280154 CGNQ9P2M7 1197 aaKnown RBP11.61□□□□□ -0.55
PDCD4-201ENST00000280154 STK10O94804 968 aaKnown RBP11.6□□□□□ -0.55
PDCD4-201ENST00000280154 NOP58Q9Y2X3 529 aaKnown RBP11.6□□□□□ -0.55
PDCD4-201ENST00000280154 APAF1O14727 1248 aa11.6□□□□□ -0.55
PDCD4-201ENST00000280154 PPFIA4O75335 1185 aa11.6□□□□□ -0.55
PDCD4-201ENST00000280154 MYBPC2Q14324 1141 aa11.6□□□□□ -0.55
PDCD4-201ENST00000280154 KRBA2Q6ZNG9 492 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms