RNA–Protein interactions for RNA: ENST00000274990.4

CRIP3-201, Transcript of cysteine rich protein 3, humanhuman

TSL 1 (best) BASIC

Gene CRIP3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIP3-201ENST00000274990 GPTP24298 496 aa12.21□□□□□ -0.45
CRIP3-201ENST00000274990 DUSP27Q5VZP5 1158 aa12.21□□□□□ -0.45
CRIP3-201ENST00000274990 LRP10Q7Z4F1 713 aa12.21□□□□□ -0.45
CRIP3-201ENST00000274990 WWC1Q8IX03 1113 aa12.21□□□□□ -0.45
CRIP3-201ENST00000274990 TSPYL6Q8N831 410 aa12.21□□□□□ -0.45
CRIP3-201ENST00000274990 C8orf58Q8NAV2 365 aa12.21□□□□□ -0.45
CRIP3-201ENST00000274990 CFAP44Q96MT7 982 aa12.21□□□□□ -0.45
CRIP3-201ENST00000274990 CHPF2Q9P2E5 772 aa12.21□□□□□ -0.45
CRIP3-201ENST00000274990 BCS1LQ9Y276 419 aa12.21□□□□□ -0.45
CRIP3-201ENST00000274990 NUP98P52948 1817 aa12.21□□□□□ -0.46
CRIP3-201ENST00000274990 NRXN2Q9P2S2 1712 aa12.2□□□□□ -0.46
CRIP3-201ENST00000274990 YY1P25490 414 aa12.2□□□□□ -0.46
CRIP3-201ENST00000274990 PRR5LQ6MZQ0 368 aa12.2□□□□□ -0.46
CRIP3-201ENST00000274990 SPINK5Q9NQ38 1064 aaPredicted RBP12.2□□□□□ -0.46
CRIP3-201ENST00000274990 BRCA1P38398 1863 aaKnown RBP12.19□□□□□ -0.46
CRIP3-201ENST00000274990 XAGE3Q8WTP9 111 aa12.19□□□□□ -0.46
CRIP3-201ENST00000274990 SETDB2Q96T68 719 aa12.19□□□□□ -0.46
CRIP3-201ENST00000274990 IFT57Q9NWB7 429 aa12.19□□□□□ -0.46
CRIP3-201ENST00000274990 ZNF219Q9P2Y4 722 aaPredicted RBP12.19□□□□□ -0.46
CRIP3-201ENST00000274990 NIP7Q9Y221 180 aaKnown RBP eCLIP12.19□□□□□ -0.46
CRIP3-201ENST00000274990 CACNA1SQ13698 1873 aa12.19□□□□□ -0.46
CRIP3-201ENST00000274990 COL11A2P13942 1736 aaPredicted RBP12.18□□□□□ -0.46
CRIP3-201ENST00000274990 CHD4Q14839 1912 aa12.18□□□□□ -0.46
CRIP3-201ENST00000274990 GNAI1P63096 354 aa12.18□□□□□ -0.46
CRIP3-201ENST00000274990 HDGFL1Q5TGJ6 251 aa12.18□□□□□ -0.46
CRIP3-201ENST00000274990 COPS6Q7L5N1 327 aa12.18□□□□□ -0.46
CRIP3-201ENST00000274990 NUTM1Q86Y26 1132 aa12.18□□□□□ -0.46
CRIP3-201ENST00000274990 MIER1Q8N108 512 aa12.18□□□□□ -0.46
CRIP3-201ENST00000274990 BABAM1Q9NWV8 329 aa12.18□□□□□ -0.46
CRIP3-201ENST00000274990 MAP3K15Q6ZN16 1313 aa12.17□□□□□ -0.46
CRIP3-201ENST00000274990 NPHP1O15259 732 aa12.17□□□□□ -0.46
CRIP3-201ENST00000274990 TGFB2P61812 414 aa12.17□□□□□ -0.46
CRIP3-201ENST00000274990 KIF6Q6ZMV9 814 aa12.17□□□□□ -0.46
CRIP3-201ENST00000274990 C2CD5Q86YS7 1000 aa12.17□□□□□ -0.46
CRIP3-201ENST00000274990 UBN2Q6ZU65 1347 aa12.16□□□□□ -0.46
CRIP3-201ENST00000274990 DIEXFQ68CQ4 756 aaKnown RBP12.16□□□□□ -0.46
CRIP3-201ENST00000274990 SLC51AQ86UW1 340 aa12.16□□□□□ -0.46
CRIP3-201ENST00000274990 NBPF5PQ86XG9 351 aaPredicted RBP12.16□□□□□ -0.46
CRIP3-201ENST00000274990 CNBD1Q8NA66 436 aa12.16□□□□□ -0.46
CRIP3-201ENST00000274990 PHAXQ9H814 394 aaKnown RBP12.16□□□□□ -0.46
CRIP3-201ENST00000274990 TNRC6CQ9HCJ0 1690 aaKnown RBP12.16□□□□□ -0.46
CRIP3-201ENST00000274990 SUSD4Q5VX71 490 aa12.15□□□□□ -0.46
CRIP3-201ENST00000274990 SYNE4Q8N205 404 aa12.15□□□□□ -0.46
CRIP3-201ENST00000274990 ZNF622Q969S3 477 aaKnown RBP eCLIP12.15□□□□□ -0.46
CRIP3-201ENST00000274990 ZNF652Q9Y2D9 606 aa12.15□□□□□ -0.46
CRIP3-201ENST00000274990 ABCC12Q96J65 1359 aa12.15□□□□□ -0.46
CRIP3-201ENST00000274990 FANCIQ9NVI1 1328 aa12.14□□□□□ -0.47
CRIP3-201ENST00000274990 CCDC27Q2M243 656 aa12.14□□□□□ -0.47
CRIP3-201ENST00000274990 ERFEQ4G0M1 354 aa12.14□□□□□ -0.47
CRIP3-201ENST00000274990 ARHGAP27Q6ZUM4 889 aa12.14□□□□□ -0.47
CRIP3-201ENST00000274990 C3orf67Q6ZVT6 689 aa12.14□□□□□ -0.47
CRIP3-201ENST00000274990 DDX21Q9NR30 783 aaKnown RBP eCLIP12.14□□□□□ -0.47
CRIP3-201ENST00000274990 PIM2Q9P1W9 311 aa12.14□□□□□ -0.47
CRIP3-201ENST00000274990 DLEC1Q9Y238 1755 aa12.13□□□□□ -0.47
CRIP3-201ENST00000274990 ATP5J2-PTCD1G3V325 749 aa12.13□□□□□ -0.47
CRIP3-201ENST00000274990 RASSF7Q02833 373 aa12.13□□□□□ -0.47
CRIP3-201ENST00000274990 CALD1Q05682 793 aaKnown RBP12.13□□□□□ -0.47
CRIP3-201ENST00000274990 DALRD3Q5D0E6 543 aaKnown RBP12.13□□□□□ -0.47
CRIP3-201ENST00000274990 OLFM4Q6UX06 510 aa12.13□□□□□ -0.47
CRIP3-201ENST00000274990 CLEC4GQ6UXB4 293 aa12.13□□□□□ -0.47
CRIP3-201ENST00000274990 G2E3Q7L622 706 aa12.13□□□□□ -0.47
CRIP3-201ENST00000274990 ERBB4Q15303 1308 aa12.12□□□□□ -0.47
CRIP3-201ENST00000274990 SLX4Q8IY92 1834 aa12.12□□□□□ -0.47
CRIP3-201ENST00000274990 ERVV-1B6SEH8 477 aa12.12□□□□□ -0.47
CRIP3-201ENST00000274990 H0YIN7 160 aa12.12□□□□□ -0.47
CRIP3-201ENST00000274990 GRIN3BO60391 1043 aa12.12□□□□□ -0.47
CRIP3-201ENST00000274990 ST5P78524 1137 aa12.12□□□□□ -0.47
CRIP3-201ENST00000274990 EXOSC9Q06265 439 aaKnown RBP12.12□□□□□ -0.47
CRIP3-201ENST00000274990 RTL5Q5HYW3 569 aaPredicted RBP12.12□□□□□ -0.47
CRIP3-201ENST00000274990 GIGYF2Q6Y7W6 1299 aaKnown RBP12.12□□□□□ -0.47
CRIP3-201ENST00000274990 ZNF34Q8IZ26 560 aa12.12□□□□□ -0.47
CRIP3-201ENST00000274990 ZNF526Q8TF50 670 aaPredicted RBP12.12□□□□□ -0.47
CRIP3-201ENST00000274990 JARID2Q92833 1246 aaPredicted RBP12.12□□□□□ -0.47
CRIP3-201ENST00000274990 ANKRD36CQ5JPF3 1778 aa12.12□□□□□ -0.47
CRIP3-201ENST00000274990 ARFGEF1Q9Y6D6 1849 aa12.11□□□□□ -0.47
CRIP3-201ENST00000274990 ARFGEF2Q9Y6D5 1785 aa12.11□□□□□ -0.47
CRIP3-201ENST00000274990 GTF2E1P29083 439 aaPredicted RBP12.11□□□□□ -0.47
CRIP3-201ENST00000274990 TWISTNBQ3B726 338 aaPredicted RBP12.11□□□□□ -0.47
CRIP3-201ENST00000274990 ZNF784Q8NCA9 323 aaPredicted RBP12.11□□□□□ -0.47
CRIP3-201ENST00000274990 BRIP1Q9BX63 1249 aa12.11□□□□□ -0.47
CRIP3-201ENST00000274990 DBF4Q9UBU7 674 aaPredicted RBP12.11□□□□□ -0.47
CRIP3-201ENST00000274990 C21orf2O43822 256 aa12.1□□□□□ -0.47
CRIP3-201ENST00000274990 NTSR2O95665 410 aa12.1□□□□□ -0.47
CRIP3-201ENST00000274990 HOXB7P09629 217 aa12.1□□□□□ -0.47
CRIP3-201ENST00000274990 PRELPP51888 382 aa12.1□□□□□ -0.47
CRIP3-201ENST00000274990 TPTE2Q6XPS3 522 aa12.1□□□□□ -0.47
CRIP3-201ENST00000274990 CDCA7LQ96GN5 454 aa12.1□□□□□ -0.47
CRIP3-201ENST00000274990 TAF1P21675 1872 aa12.1□□□□□ -0.47
CRIP3-201ENST00000274990 CCDC88AQ3V6T2 1871 aa12.1□□□□□ -0.47
CRIP3-201ENST00000274990 ATP10DQ9P241 1426 aa12.1□□□□□ -0.47
CRIP3-201ENST00000274990 HCLS1P14317 486 aaPredicted RBP12.09□□□□□ -0.47
CRIP3-201ENST00000274990 PDE6BP35913 854 aa12.09□□□□□ -0.47
CRIP3-201ENST00000274990 ANKRD13DQ6ZTN6 518 aa12.09□□□□□ -0.47
CRIP3-201ENST00000274990 NLRP10Q86W26 655 aa12.09□□□□□ -0.47
CRIP3-201ENST00000274990 WDR63Q8IWG1 891 aa12.09□□□□□ -0.47
CRIP3-201ENST00000274990 TTLL6Q8N841 843 aa12.09□□□□□ -0.47
CRIP3-201ENST00000274990 IL16Q14005 1332 aa12.09□□□□□ -0.47
CRIP3-201ENST00000274990 CCER2I3L3R5 266 aa12.08□□□□□ -0.48
CRIP3-201ENST00000274990 VAMP4O75379 141 aa12.08□□□□□ -0.48
CRIP3-201ENST00000274990 SRGNP10124 158 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms