RNA–Protein interactions for RNA: ENST00000269834.1

ZIM3-201, Transcript of zinc finger imprinted 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIM3, Length 2,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3-201ENST00000269834 USP17L12C9JPN9 530 aa9.68□□□□□ -0.86
ZIM3-201ENST00000269834 USP17L11C9JVI0 530 aa9.68□□□□□ -0.86
ZIM3-201ENST00000269834 USP17L21D6R901 530 aa9.68□□□□□ -0.86
ZIM3-201ENST00000269834 USP17L18D6R9N7 530 aa9.68□□□□□ -0.86
ZIM3-201ENST00000269834 USP17L22D6RA61 530 aa9.68□□□□□ -0.86
ZIM3-201ENST00000269834 USP17L17D6RBQ6 530 aa9.68□□□□□ -0.86
ZIM3-201ENST00000269834 USP17L19D6RCP7 530 aa9.68□□□□□ -0.86
ZIM3-201ENST00000269834 USP17L20D6RJB6 530 aa9.68□□□□□ -0.86
ZIM3-201ENST00000269834 CT47B1P0C2W7 299 aaPredicted RBP9.68□□□□□ -0.86
ZIM3-201ENST00000269834 RARSP54136 660 aaKnown RBP9.68□□□□□ -0.86
ZIM3-201ENST00000269834 USP17L24Q0WX57 530 aa9.68□□□□□ -0.86
ZIM3-201ENST00000269834 FAM43AQ8N2R8 423 aa9.68□□□□□ -0.86
ZIM3-201ENST00000269834 NOS1P29475 1434 aa9.67□□□□□ -0.86
ZIM3-201ENST00000269834 CLTCQ00610 1675 aaKnown RBP9.67□□□□□ -0.86
ZIM3-201ENST00000269834 AFAP1Q8N556 730 aa9.67□□□□□ -0.86
ZIM3-201ENST00000269834 UPF2Q9HAU5 1272 aaKnown RBP9.67□□□□□ -0.86
ZIM3-201ENST00000269834 NME8Q8N427 588 aa9.67□□□□□ -0.86
ZIM3-201ENST00000269834 TBC1D32Q96NH3 1257 aa9.67□□□□□ -0.86
ZIM3-201ENST00000269834 IFT57Q9NWB7 429 aa9.67□□□□□ -0.86
ZIM3-201ENST00000269834 TULP4Q9NRJ4 1543 aa9.66□□□□□ -0.86
ZIM3-201ENST00000269834 PLEKHG6Q3KR16 790 aa9.66□□□□□ -0.86
ZIM3-201ENST00000269834 CCDC181Q5TID7 509 aa9.66□□□□□ -0.86
ZIM3-201ENST00000269834 FILIP1Q7Z7B0 1213 aa9.66□□□□□ -0.86
ZIM3-201ENST00000269834 FRMPD1Q5SYB0 1578 aa9.66□□□□□ -0.86
ZIM3-201ENST00000269834 P4HBP07237 508 aaKnown RBP9.66□□□□□ -0.86
ZIM3-201ENST00000269834 DIXDC1Q155Q3 683 aa9.66□□□□□ -0.86
ZIM3-201ENST00000269834 EAPPQ56P03 285 aaPredicted RBP9.66□□□□□ -0.86
ZIM3-201ENST00000269834 GPATCH11Q8N954 259 aa9.66□□□□□ -0.86
ZIM3-201ENST00000269834 PANK1Q8TE04 598 aa9.66□□□□□ -0.86
ZIM3-201ENST00000269834 ASB16Q96NS5 453 aa9.66□□□□□ -0.86
ZIM3-201ENST00000269834 IRF2BPLQ9H1B7 796 aa9.66□□□□□ -0.86
ZIM3-201ENST00000269834 ANTXR1Q9H6X2 564 aa9.66□□□□□ -0.86
ZIM3-201ENST00000269834 RPGRIP1LQ68CZ1 1315 aa9.65□□□□□ -0.86
ZIM3-201ENST00000269834 PRMT3O60678 531 aa9.65□□□□□ -0.86
ZIM3-201ENST00000269834 IBSPP21815 317 aaPredicted RBP9.65□□□□□ -0.86
ZIM3-201ENST00000269834 ECM1Q16610 540 aa9.65□□□□□ -0.86
ZIM3-201ENST00000269834 PADI6Q6TGC4 694 aa9.65□□□□□ -0.86
ZIM3-201ENST00000269834 SMC5Q8IY18 1101 aa9.65□□□□□ -0.86
ZIM3-201ENST00000269834 PCDH12Q9NPG4 1184 aa9.65□□□□□ -0.86
ZIM3-201ENST00000269834 ANKRD36BQ8N2N9 1353 aa9.65□□□□□ -0.87
ZIM3-201ENST00000269834 EVI5O60447 810 aa9.65□□□□□ -0.87
ZIM3-201ENST00000269834 MCCD1P59942 119 aaPredicted RBP9.65□□□□□ -0.87
ZIM3-201ENST00000269834 FANCCQ00597 558 aa9.65□□□□□ -0.87
ZIM3-201ENST00000269834 L1TD1Q5T7N2 865 aaKnown RBP9.65□□□□□ -0.87
ZIM3-201ENST00000269834 MORC1Q86VD1 984 aa9.65□□□□□ -0.87
ZIM3-201ENST00000269834 HELBQ8NG08 1087 aaPredicted RBP9.65□□□□□ -0.87
ZIM3-201ENST00000269834 KIF12Q96FN5 646 aa9.65□□□□□ -0.87
ZIM3-201ENST00000269834 CFAP53Q96M91 514 aa9.65□□□□□ -0.87
ZIM3-201ENST00000269834 RWDD1Q9H446 243 aaPredicted RBP9.65□□□□□ -0.87
ZIM3-201ENST00000269834 MED14O60244 1454 aa9.64□□□□□ -0.87
ZIM3-201ENST00000269834 KIF3BO15066 747 aa9.64□□□□□ -0.87
ZIM3-201ENST00000269834 HLA-CQ95604 372 aa9.64□□□□□ -0.87
ZIM3-201ENST00000269834 ADGRG1Q9Y653 693 aa9.64□□□□□ -0.87
ZIM3-201ENST00000269834 CDC42BPGQ6DT37 1551 aa9.64□□□□□ -0.87
ZIM3-201ENST00000269834 NEXMIFQ5QGS0 1516 aa9.64□□□□□ -0.87
ZIM3-201ENST00000269834 COL3A1P02461 1466 aaPredicted RBP9.64□□□□□ -0.87
ZIM3-201ENST00000269834 SETQ01105 290 aaPredicted RBP9.64□□□□□ -0.87
ZIM3-201ENST00000269834 GLYCTKQ8IVS8 523 aa9.64□□□□□ -0.87
ZIM3-201ENST00000269834 TCP11L2Q8N4U5 519 aa9.64□□□□□ -0.87
ZIM3-201ENST00000269834 CLP1Q92989 425 aaKnown RBP9.64□□□□□ -0.87
ZIM3-201ENST00000269834 CCSER2Q9H7U1 834 aa9.64□□□□□ -0.87
ZIM3-201ENST00000269834 ABCC3O15438 1527 aa9.64□□□□□ -0.87
ZIM3-201ENST00000269834 NPATQ14207 1427 aa9.63□□□□□ -0.87
ZIM3-201ENST00000269834 SEC24BO95487 1268 aa9.63□□□□□ -0.87
ZIM3-201ENST00000269834 EN1Q05925 392 aaPredicted RBP9.63□□□□□ -0.87
ZIM3-201ENST00000269834 PTK7Q13308 1070 aa9.63□□□□□ -0.87
ZIM3-201ENST00000269834 ZNF746Q6NUN9 644 aaPredicted RBP9.63□□□□□ -0.87
ZIM3-201ENST00000269834 CAPN12Q6ZSI9 719 aa9.63□□□□□ -0.87
ZIM3-201ENST00000269834 C14orf93Q9H972 538 aaKnown RBP9.63□□□□□ -0.87
ZIM3-201ENST00000269834 TRPC6Q9Y210 931 aa9.63□□□□□ -0.87
ZIM3-201ENST00000269834 MLH3Q9UHC1 1453 aa9.63□□□□□ -0.87
ZIM3-201ENST00000269834 SIGLEC1Q9BZZ2 1709 aa9.63□□□□□ -0.87
ZIM3-201ENST00000269834 KIF20BQ96Q89 1820 aa9.63□□□□□ -0.87
ZIM3-201ENST00000269834 FAM43BQ6ZT52 329 aaPredicted RBP9.63□□□□□ -0.87
ZIM3-201ENST00000269834 FMNL3Q8IVF7 1028 aa9.63□□□□□ -0.87
ZIM3-201ENST00000269834 FAM174AQ8TBP5 190 aa9.63□□□□□ -0.87
ZIM3-201ENST00000269834 REREQ9P2R6 1566 aa9.63□□□□□ -0.87
ZIM3-201ENST00000269834 ABCC11Q96J66 1382 aa9.62□□□□□ -0.87
ZIM3-201ENST00000269834 SH3BP5O60239 455 aa9.62□□□□□ -0.87
ZIM3-201ENST00000269834 GUCA2AQ02747 115 aa9.62□□□□□ -0.87
ZIM3-201ENST00000269834 MVPQ14764 893 aaKnown RBP9.62□□□□□ -0.87
ZIM3-201ENST00000269834 HSP90AB2PQ58FF8 381 aa9.62□□□□□ -0.87
ZIM3-201ENST00000269834 USP17L5A8MUK1 530 aa9.62□□□□□ -0.87
ZIM3-201ENST00000269834 HOXA2O43364 376 aa9.62□□□□□ -0.87
ZIM3-201ENST00000269834 CHRDL2Q6WN34 429 aa9.62□□□□□ -0.87
ZIM3-201ENST00000269834 MICALL2Q8IY33 904 aa9.62□□□□□ -0.87
ZIM3-201ENST00000269834 ZNF594Q96JF6 807 aaPredicted RBP9.62□□□□□ -0.87
ZIM3-201ENST00000269834 MKRN1Q9UHC7 482 aaKnown RBP9.62□□□□□ -0.87
ZIM3-201ENST00000269834 PDZRN3Q9UPQ7 1066 aa9.62□□□□□ -0.87
ZIM3-201ENST00000269834 PCDHGB7Q9Y5F8 929 aa9.62□□□□□ -0.87
ZIM3-201ENST00000269834 RASA1P20936 1047 aa9.61□□□□□ -0.87
ZIM3-201ENST00000269834 TBX4P57082 545 aa9.61□□□□□ -0.87
ZIM3-201ENST00000269834 KCNH2Q12809 1159 aa9.61□□□□□ -0.87
ZIM3-201ENST00000269834 NUTM1Q86Y26 1132 aa9.61□□□□□ -0.87
ZIM3-201ENST00000269834 POGZQ7Z3K3 1410 aa9.61□□□□□ -0.87
ZIM3-201ENST00000269834 RLBP1P12271 317 aa9.61□□□□□ -0.87
ZIM3-201ENST00000269834 ARHGAP4P98171 946 aa9.61□□□□□ -0.87
ZIM3-201ENST00000269834 ZFYVE27Q5T4F4 411 aa9.61□□□□□ -0.87
ZIM3-201ENST00000269834 SEPT3Q9UH03 358 aa9.61□□□□□ -0.87
ZIM3-201ENST00000269834 IL16Q14005 1332 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms