RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 KRT27Q7Z3Y8 459 aa15.75■□□□□ 0.11
CPSF6-201ENST00000266679 ANO2Q9NQ90 1003 aa15.75■□□□□ 0.11
CPSF6-201ENST00000266679 ONECUT3O60422 494 aaPredicted RBP15.75■□□□□ 0.11
CPSF6-201ENST00000266679 RHPN1Q8TCX5 695 aa15.75■□□□□ 0.11
CPSF6-201ENST00000266679 DBF4Q9UBU7 674 aaPredicted RBP15.75■□□□□ 0.11
CPSF6-201ENST00000266679 ADAMTS7Q9UKP4 1686 aa15.74■□□□□ 0.11
CPSF6-201ENST00000266679 MAP4K4O95819 1239 aaPredicted RBP15.74■□□□□ 0.11
CPSF6-201ENST00000266679 PTMSP20962 102 aa15.74■□□□□ 0.11
CPSF6-201ENST00000266679 DEFB132Q7Z7B7 95 aa15.74■□□□□ 0.11
CPSF6-201ENST00000266679 XRCC6P12956 609 aaKnown RBP eCLIP15.74■□□□□ 0.119e-12■■■■□ 25
CPSF6-201ENST00000266679 MCCP23508 829 aa15.74■□□□□ 0.11
CPSF6-201ENST00000266679 ZGPATQ8N5A5 531 aaKnown RBP15.74■□□□□ 0.11
CPSF6-201ENST00000266679 MAP3K2Q9Y2U5 619 aa15.74■□□□□ 0.11
CPSF6-201ENST00000266679 C5P01031 1676 aa15.73■□□□□ 0.11
CPSF6-201ENST00000266679 GIGYF1O75420 1035 aaPredicted RBP15.73■□□□□ 0.11
CPSF6-201ENST00000266679 BAG4O95429 457 aaKnown RBP15.73■□□□□ 0.11
CPSF6-201ENST00000266679 PALD1Q9ULE6 856 aa15.73■□□□□ 0.11
CPSF6-201ENST00000266679 SPATA31A1Q5TZJ5 1347 aa15.73■□□□□ 0.11
CPSF6-201ENST00000266679 KIF1BPQ96EK5 621 aa15.72■□□□□ 0.11
CPSF6-201ENST00000266679 SCN11AQ9UI33 1791 aa15.72■□□□□ 0.11
CPSF6-201ENST00000266679 ERBB3P21860 1342 aa15.72■□□□□ 0.11
CPSF6-201ENST00000266679 GOLGA6L22H0YM25 854 aa15.72■□□□□ 0.11
CPSF6-201ENST00000266679 NEK4P51957 841 aa15.72■□□□□ 0.11
CPSF6-201ENST00000266679 NUCB2P80303 420 aa15.72■□□□□ 0.11
CPSF6-201ENST00000266679 PKP1Q13835 747 aa15.72■□□□□ 0.11
CPSF6-201ENST00000266679 SKOR2Q2VWA4 1001 aaPredicted RBP15.72■□□□□ 0.11
CPSF6-201ENST00000266679 LARP1Q6PKG0 1096 aaKnown RBP15.72■□□□□ 0.11
CPSF6-201ENST00000266679 PANK2Q9BZ23 570 aa15.72■□□□□ 0.11
CPSF6-201ENST00000266679 OS9Q13438 667 aaPredicted RBP15.71■□□□□ 0.11
CPSF6-201ENST00000266679 CPDO75976 1380 aa15.71■□□□□ 0.11
CPSF6-201ENST00000266679 COL18A1P39060 1754 aa15.71■□□□□ 0.11
CPSF6-201ENST00000266679 HEG1Q9ULI3 1381 aa15.71■□□□□ 0.1
CPSF6-201ENST00000266679 PI4K2BQ8TCG2 481 aa15.71■□□□□ 0.1
CPSF6-201ENST00000266679 COL5A2P05997 1499 aaPredicted RBP15.7■□□□□ 0.1
CPSF6-201ENST00000266679 CYP2E1P05181 493 aaPredicted RBP15.7■□□□□ 0.1
CPSF6-201ENST00000266679 EVA1CP58658 441 aa15.7■□□□□ 0.1
CPSF6-201ENST00000266679 CWF19L2Q2TBE0 894 aaKnown RBP15.7■□□□□ 0.1
CPSF6-201ENST00000266679 IL25Q9H293 177 aa15.7■□□□□ 0.1
CPSF6-201ENST00000266679 CWC22Q9HCG8 908 aaKnown RBP15.7■□□□□ 0.1
CPSF6-201ENST00000266679 C9orf78Q9NZ63 289 aaPredicted RBP15.7■□□□□ 0.1
CPSF6-201ENST00000266679 TNS1Q9HBL0 1735 aaKnown RBP15.7■□□□□ 0.1
CPSF6-201ENST00000266679 KSR2Q6VAB6 950 aa15.7■□□□□ 0.1
CPSF6-201ENST00000266679 CLEC17AQ6ZS10 378 aa15.7■□□□□ 0.1
CPSF6-201ENST00000266679 NOL8Q76FK4 1167 aaKnown RBP15.7■□□□□ 0.1
CPSF6-201ENST00000266679 NLRP2Q9NX02 1062 aa15.7■□□□□ 0.1
CPSF6-201ENST00000266679 ALDH1L1O75891 902 aa15.69■□□□□ 0.1
CPSF6-201ENST00000266679 MCTP1Q6DN14 999 aa15.69■□□□□ 0.1
CPSF6-201ENST00000266679 KDM6AO15550 1401 aaPredicted RBP15.68■□□□□ 0.1
CPSF6-201ENST00000266679 MRE11P49959 708 aa15.68■□□□□ 0.1
CPSF6-201ENST00000266679 HSP90AB4PQ58FF6 505 aa15.68■□□□□ 0.1
CPSF6-201ENST00000266679 RAPGEF4Q8WZA2 1011 aa15.68■□□□□ 0.1
CPSF6-201ENST00000266679 AIMP1Q12904 312 aaKnown RBP15.68■□□□□ 0.1
CPSF6-201ENST00000266679 SLC39A6Q13433 755 aa15.68■□□□□ 0.1
CPSF6-201ENST00000266679 TMX3Q96JJ7 454 aa15.68■□□□□ 0.1
CPSF6-201ENST00000266679 GRPEL1Q9HAV7 217 aa15.68■□□□□ 0.1
CPSF6-201ENST00000266679 HYPKQ9NX55 129 aa15.68■□□□□ 0.1
CPSF6-201ENST00000266679 MEGF6O75095 1541 aa15.68■□□□□ 0.1
CPSF6-201ENST00000266679 WNK3Q9BYP7 1800 aa15.67■□□□□ 0.1
CPSF6-201ENST00000266679 ANAPC15P60006 121 aa15.67■□□□□ 0.1
CPSF6-201ENST00000266679 CCDC125Q86Z20 511 aa15.67■□□□□ 0.1
CPSF6-201ENST00000266679 CNTROBQ8N137 903 aa15.67■□□□□ 0.1
CPSF6-201ENST00000266679 PA2G4Q9UQ80 394 aaKnown RBP15.67■□□□□ 0.1
CPSF6-201ENST00000266679 TATP17735 454 aaPredicted RBP15.66■□□□□ 0.1
CPSF6-201ENST00000266679 SF3B2Q13435 895 aaKnown RBP15.66■□□□□ 0.1
CPSF6-201ENST00000266679 MTX1Q13505 466 aa15.66■□□□□ 0.1
CPSF6-201ENST00000266679 DDX49Q9Y6V7 483 aaKnown RBP15.66■□□□□ 0.1
CPSF6-201ENST00000266679 MCM2P49736 904 aa15.66■□□□□ 0.1
CPSF6-201ENST00000266679 GAS2L3Q86XJ1 694 aa15.66■□□□□ 0.1
CPSF6-201ENST00000266679 FAM43AQ8N2R8 423 aa15.66■□□□□ 0.1
CPSF6-201ENST00000266679 UPF3BQ9BZI7 483 aaKnown RBP15.66■□□□□ 0.1
CPSF6-201ENST00000266679 DDX21Q9NR30 783 aaKnown RBP eCLIP15.66■□□□□ 0.1
CPSF6-201ENST00000266679 ZDHHC9Q9Y397 364 aa15.66■□□□□ 0.1
CPSF6-201ENST00000266679 PARP4Q9UKK3 1724 aaKnown RBP15.65■□□□□ 0.1
CPSF6-201ENST00000266679 DDX58O95786 925 aaKnown RBP15.65■□□□□ 0.1
CPSF6-201ENST00000266679 CSB-PGBD3P0DP91 1061 aa15.65■□□□□ 0.1
CPSF6-201ENST00000266679 FOXD4L5Q5VV16 416 aaPredicted RBP15.65■□□□□ 0.1
CPSF6-201ENST00000266679 FOXD4L4Q8WXT5 416 aaPredicted RBP15.65■□□□□ 0.1
CPSF6-201ENST00000266679 SUCLG2Q96I99 432 aa15.65■□□□□ 0.1
CPSF6-201ENST00000266679 PDIA6Q15084 440 aa15.64■□□□□ 0.09
CPSF6-201ENST00000266679 ZNF790Q6PG37 636 aa15.64■□□□□ 0.09
CPSF6-201ENST00000266679 SLC52A2Q9HAB3 445 aa15.64■□□□□ 0.09
CPSF6-201ENST00000266679 ISY1Q9ULR0 285 aaKnown RBP15.64■□□□□ 0.09
CPSF6-201ENST00000266679 USP42Q9H9J4 1324 aaKnown RBP15.64■□□□□ 0.09
CPSF6-201ENST00000266679 GRM8O00222 908 aa15.64■□□□□ 0.09
CPSF6-201ENST00000266679 SGSM2O43147 1006 aa15.64■□□□□ 0.09
CPSF6-201ENST00000266679 MYL6BP14649 208 aa15.64■□□□□ 0.09
CPSF6-201ENST00000266679 PHKG2P15735 406 aa15.64■□□□□ 0.09
CPSF6-201ENST00000266679 HSPA4P34932 840 aa15.64■□□□□ 0.09
CPSF6-201ENST00000266679 KLHL40Q2TBA0 621 aa15.64■□□□□ 0.09
CPSF6-201ENST00000266679 CLASRPQ8N2M8 674 aaKnown RBP15.64■□□□□ 0.09
CPSF6-201ENST00000266679 LINS1Q8NG48 757 aa15.64■□□□□ 0.09
CPSF6-201ENST00000266679 TTC41PQ6P2S7 1318 aa15.63■□□□□ 0.09
CPSF6-201ENST00000266679 RAD50Q92878 1312 aa15.63■□□□□ 0.09
CPSF6-201ENST00000266679 RIC3Q7Z5B4 369 aa15.63■□□□□ 0.09
CPSF6-201ENST00000266679 SPG7Q9UQ90 795 aa15.63■□□□□ 0.09
CPSF6-201ENST00000266679 GLRX3O76003 335 aaKnown RBP15.63■□□□□ 0.09
CPSF6-201ENST00000266679 NCLP19338 710 aaKnown RBP15.63■□□□□ 0.09
CPSF6-201ENST00000266679 CWC27Q6UX04 472 aaKnown RBP15.63■□□□□ 0.09
CPSF6-201ENST00000266679 NFATC2IPQ8NCF5 419 aa15.63■□□□□ 0.09
CPSF6-201ENST00000266679 CHAMP1Q96JM3 812 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms