RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 GPBP1L1Q9HC44 474 aaPredicted RBP21.07■□□□□ 0.96
USE1-201ENST00000263897 NPHP1O15259 732 aa21.06■□□□□ 0.96
USE1-201ENST00000263897 C1QTNF8P60827 252 aa21.06■□□□□ 0.96
USE1-201ENST00000263897 HLFQ16534 295 aa21.06■□□□□ 0.96
USE1-201ENST00000263897 ANKRD31Q8N7Z5 1873 aa21.05■□□□□ 0.96
USE1-201ENST00000263897 ERVV-1B6SEH8 477 aa21.05■□□□□ 0.96
USE1-201ENST00000263897 MYL6BP14649 208 aa21.05■□□□□ 0.96
USE1-201ENST00000263897 NBPF5PQ86XG9 351 aaPredicted RBP21.05■□□□□ 0.96
USE1-201ENST00000263897 ZNF526Q8TF50 670 aaPredicted RBP21.05■□□□□ 0.96
USE1-201ENST00000263897 NIP7Q9Y221 180 aaKnown RBP eCLIP21.05■□□□□ 0.96
USE1-201ENST00000263897 ERBB4Q15303 1308 aa21.04■□□□□ 0.96
USE1-201ENST00000263897 ST5P78524 1137 aa21.04■□□□□ 0.96
USE1-201ENST00000263897 TPTE2Q6XPS3 522 aa21.04■□□□□ 0.96
USE1-201ENST00000263897 ZNF622Q969S3 477 aaKnown RBP eCLIP21.04■□□□□ 0.96
USE1-201ENST00000263897 DLEC1Q9Y238 1755 aa21.04■□□□□ 0.96
USE1-201ENST00000263897 EIF2S2P20042 333 aaKnown RBP21.03■□□□□ 0.96
USE1-201ENST00000263897 C9orf131Q5VYM1 1079 aa21.03■□□□□ 0.96
USE1-201ENST00000263897 TTLL7Q6ZT98 887 aa21.03■□□□□ 0.96
USE1-201ENST00000263897 MAP3K15Q6ZN16 1313 aa21.03■□□□□ 0.96
USE1-201ENST00000263897 PDIA6Q15084 440 aa21.02■□□□□ 0.96
USE1-201ENST00000263897 LAS1LQ9Y4W2 734 aaKnown RBP21.02■□□□□ 0.96
USE1-201ENST00000263897 APAF1O14727 1248 aa21.01■□□□□ 0.95
USE1-201ENST00000263897 SRGNP10124 158 aa21.01■□□□□ 0.95
USE1-201ENST00000263897 KIF6Q6ZMV9 814 aa21.01■□□□□ 0.95
USE1-201ENST00000263897 NUP98P52948 1817 aa21■□□□□ 0.95
USE1-201ENST00000263897 CCDC184Q52MB2 194 aa21■□□□□ 0.95
USE1-201ENST00000263897 STYK1Q6J9G0 422 aa21■□□□□ 0.95
USE1-201ENST00000263897 LRP10Q7Z4F1 713 aa21■□□□□ 0.95
USE1-201ENST00000263897 SBF1O95248 1867 aa21■□□□□ 0.95
USE1-201ENST00000263897 KLRG2A4D1S0 409 aaPredicted RBP20.99■□□□□ 0.95
USE1-201ENST00000263897 FAM177BA6PVY3 158 aa20.99■□□□□ 0.95
USE1-201ENST00000263897 CNKSR1Q969H4 720 aa20.99■□□□□ 0.95
USE1-201ENST00000263897 MASTLQ96GX5 879 aa20.99■□□□□ 0.95
USE1-201ENST00000263897 CFAP44Q96MT7 982 aa20.99■□□□□ 0.95
USE1-201ENST00000263897 ZBTB3Q9H5J0 574 aa20.99■□□□□ 0.95
USE1-201ENST00000263897 RNF181Q9P0P0 153 aa20.99■□□□□ 0.95
USE1-201ENST00000263897 KRT24Q2M2I5 525 aa20.98■□□□□ 0.95
USE1-201ENST00000263897 GTF2E1P29083 439 aaPredicted RBP20.97■□□□□ 0.95
USE1-201ENST00000263897 PROSER3Q2NL68 480 aa20.97■□□□□ 0.95
USE1-201ENST00000263897 GIGYF2Q6Y7W6 1299 aaKnown RBP20.97■□□□□ 0.95
USE1-201ENST00000263897 NECTIN2Q92692 538 aa20.97■□□□□ 0.95
USE1-201ENST00000263897 C21orf2O43822 256 aa20.96■□□□□ 0.95
USE1-201ENST00000263897 ANXA1P04083 346 aa20.96■□□□□ 0.95
USE1-201ENST00000263897 RASSF7Q02833 373 aa20.96■□□□□ 0.95
USE1-201ENST00000263897 ZNF34Q8IZ26 560 aa20.96■□□□□ 0.95
USE1-201ENST00000263897 NYXQ9GZU5 481 aa20.96■□□□□ 0.95
USE1-201ENST00000263897 ZNF219Q9P2Y4 722 aaPredicted RBP20.96■□□□□ 0.95
USE1-201ENST00000263897 COL11A2P13942 1736 aaPredicted RBP20.95■□□□□ 0.94
USE1-201ENST00000263897 ZNF853P0CG23 659 aa20.95■□□□□ 0.94
USE1-201ENST00000263897 NPR1P16066 1061 aa20.95■□□□□ 0.94
USE1-201ENST00000263897 LMNB1P20700 586 aa20.95■□□□□ 0.94
USE1-201ENST00000263897 NFKBIEO00221 500 aa20.94■□□□□ 0.94
USE1-201ENST00000263897 KIF3CO14782 793 aa20.94■□□□□ 0.94
USE1-201ENST00000263897 ANP32CO43423 234 aa20.94■□□□□ 0.94
USE1-201ENST00000263897 GPTP24298 496 aa20.94■□□□□ 0.94
USE1-201ENST00000263897 PRELPP51888 382 aa20.94■□□□□ 0.94
USE1-201ENST00000263897 COPS6Q7L5N1 327 aa20.94■□□□□ 0.94
USE1-201ENST00000263897 DDX21Q9NR30 783 aaKnown RBP eCLIP20.94■□□□□ 0.94
USE1-201ENST00000263897 MBIPQ9NS73 344 aa20.94■□□□□ 0.94
USE1-201ENST00000263897 SLX4Q8IY92 1834 aa20.94■□□□□ 0.94
USE1-201ENST00000263897 HOXB7P09629 217 aa20.93■□□□□ 0.94
USE1-201ENST00000263897 CALD1Q05682 793 aaKnown RBP20.93■□□□□ 0.94
USE1-201ENST00000263897 SUSD4Q5VX71 490 aa20.93■□□□□ 0.94
USE1-201ENST00000263897 PRPF40BQ6NWY9 871 aaKnown RBP20.93■□□□□ 0.94
USE1-201ENST00000263897 UBN2Q6ZU65 1347 aa20.93■□□□□ 0.94
USE1-201ENST00000263897 GNAI1P63096 354 aa20.92■□□□□ 0.94
USE1-201ENST00000263897 ERFEQ4G0M1 354 aa20.92■□□□□ 0.94
USE1-201ENST00000263897 NUTM1Q86Y26 1132 aa20.92■□□□□ 0.94
USE1-201ENST00000263897 XAGE3Q8WTP9 111 aa20.92■□□□□ 0.94
USE1-201ENST00000263897 C7orf43Q8WVR3 580 aa20.92■□□□□ 0.94
USE1-201ENST00000263897 IFT57Q9NWB7 429 aa20.92■□□□□ 0.94
USE1-201ENST00000263897 CCDC88AQ3V6T2 1871 aa20.92■□□□□ 0.94
USE1-201ENST00000263897 AIMP1Q12904 312 aaKnown RBP20.91■□□□□ 0.94
USE1-201ENST00000263897 HDGFL1Q5TGJ6 251 aa20.91■□□□□ 0.94
USE1-201ENST00000263897 DUSP27Q5VZP5 1158 aa20.91■□□□□ 0.94
USE1-201ENST00000263897 NMRK2Q9NPI5 230 aa20.91■□□□□ 0.94
USE1-201ENST00000263897 IBTKQ9P2D0 1353 aaPredicted RBP20.9■□□□□ 0.94
USE1-201ENST00000263897 ZC3H4Q9UPT8 1303 aaKnown RBP20.9■□□□□ 0.94
USE1-201ENST00000263897 SENP3-EIF4A1A0A087X0R7 540 aa20.9■□□□□ 0.94
USE1-201ENST00000263897 PARP10Q53GL7 1025 aa20.9■□□□□ 0.94
USE1-201ENST00000263897 SOGA3Q5TF21 947 aa20.9■□□□□ 0.94
USE1-201ENST00000263897 PPP1R42Q7Z4L9 355 aa20.9■□□□□ 0.94
USE1-201ENST00000263897 CHPF2Q9P2E5 772 aa20.9■□□□□ 0.94
USE1-201ENST00000263897 FER1L6Q2WGJ9 1857 aa20.9■□□□□ 0.94
USE1-201ENST00000263897 KDM2BQ8NHM5 1336 aa20.89■□□□□ 0.93
USE1-201ENST00000263897 ALDH1B1P30837 517 aa20.89■□□□□ 0.93
USE1-201ENST00000263897 CRY2Q49AN0 593 aa20.89■□□□□ 0.93
USE1-201ENST00000263897 MRS2Q9HD23 443 aa20.89■□□□□ 0.93
USE1-201ENST00000263897 DBF4Q9UBU7 674 aaPredicted RBP20.89■□□□□ 0.93
USE1-201ENST00000263897 CACNA1SQ13698 1873 aa20.88■□□□□ 0.93
USE1-201ENST00000263897 LTBP3Q9NS15 1303 aa20.88■□□□□ 0.93
USE1-201ENST00000263897 NTSR2O95665 410 aa20.88■□□□□ 0.93
USE1-201ENST00000263897 ARFGEF2Q9Y6D5 1785 aa20.87■□□□□ 0.93
USE1-201ENST00000263897 ABCC12Q96J65 1359 aa20.87■□□□□ 0.93
USE1-201ENST00000263897 TCIRG1Q13488 830 aa20.87■□□□□ 0.93
USE1-201ENST00000263897 HSP90AB3PQ58FF7 597 aa20.87■□□□□ 0.93
USE1-201ENST00000263897 UTP14AQ9BVJ6 771 aaKnown RBP20.87■□□□□ 0.93
USE1-201ENST00000263897 TAOK3Q9H2K8 898 aa20.87■□□□□ 0.93
USE1-201ENST00000263897 TOMM70O94826 608 aa20.86■□□□□ 0.93
USE1-201ENST00000263897 SLC10A5Q5PT55 438 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms