RNA–Protein interactions for RNA: ENST00000262304.8

PKD1-201, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PKD1, Length 14,138 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-201ENST00000262304 CETN2P41208 172 aa11.75□□□□□ -0.53
PKD1-201ENST00000262304 BRD4O60885 1362 aaPredicted RBP11.75□□□□□ -0.53
PKD1-201ENST00000262304 NBPF1Q3BBV0 1214 aa11.75□□□□□ -0.53
PKD1-201ENST00000262304 CABP1Q9NZU7 370 aa11.75□□□□□ -0.53
PKD1-201ENST00000262304 ARID5AQ03989 594 aa11.75□□□□□ -0.53
PKD1-201ENST00000262304 CCDC12Q8WUD4 166 aaPredicted RBP11.75□□□□□ -0.53
PKD1-201ENST00000262304 GNG11P61952 73 aa11.75□□□□□ -0.53
PKD1-201ENST00000262304 CCDC121Q6ZUS5 278 aa11.75□□□□□ -0.53
PKD1-201ENST00000262304 FAM184BQ9ULE4 1060 aa11.75□□□□□ -0.53
PKD1-201ENST00000262304 PRKAR2BP31323 418 aa11.74□□□□□ -0.53
PKD1-201ENST00000262304 IQGAP2Q13576 1575 aa11.74□□□□□ -0.53
PKD1-201ENST00000262304 TPD52P55327 224 aaPredicted RBP11.74□□□□□ -0.53
PKD1-201ENST00000262304 ANKRD1Q15327 319 aa11.74□□□□□ -0.53
PKD1-201ENST00000262304 PRPF40BQ6NWY9 871 aaKnown RBP11.74□□□□□ -0.53
PKD1-201ENST00000262304 MIS18AQ9NYP9 233 aa11.74□□□□□ -0.53
PKD1-201ENST00000262304 CEP83Q9Y592 693 aa11.74□□□□□ -0.53
PKD1-201ENST00000262304 FAM170AA1A519 330 aa11.74□□□□□ -0.53
PKD1-201ENST00000262304 RFC1P35251 1148 aaPredicted RBP11.74□□□□□ -0.53
PKD1-201ENST00000262304 CLNS1AP54105 237 aaKnown RBP11.74□□□□□ -0.53
PKD1-201ENST00000262304 KRT222Q8N1A0 295 aa11.74□□□□□ -0.53
PKD1-201ENST00000262304 CCDC30Q5VVM6 783 aa11.74□□□□□ -0.53
PKD1-201ENST00000262304 TSG101Q99816 390 aa11.74□□□□□ -0.53
PKD1-201ENST00000262304 HIP1O00291 1037 aa11.74□□□□□ -0.53
PKD1-201ENST00000262304 FEZ2Q9UHY8 353 aaPredicted RBP11.74□□□□□ -0.53
PKD1-201ENST00000262304 MINDY4BA8MYZ0 360 aa11.73□□□□□ -0.53
PKD1-201ENST00000262304 CCDC63Q8NA47 563 aa11.73□□□□□ -0.53
PKD1-201ENST00000262304 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.73□□□□□ -0.531e-6■■■■□ 24.7
PKD1-201ENST00000262304 IKBKGQ9Y6K9 419 aa11.73□□□□□ -0.53
PKD1-201ENST00000262304 RTEL1-TNFRSF6BF6WH68 1400 aa11.73□□□□□ -0.53
PKD1-201ENST00000262304 USO1O60763 962 aaKnown RBP11.73□□□□□ -0.53
PKD1-201ENST00000262304 ERBINQ96RT1 1412 aa11.73□□□□□ -0.53
PKD1-201ENST00000262304 KIAA0586Q9BVV6 1533 aa11.73□□□□□ -0.53
PKD1-201ENST00000262304 NUTM2BA6NNL0 878 aaPredicted RBP11.73□□□□□ -0.53
PKD1-201ENST00000262304 NUTM2EB1AL46 878 aaPredicted RBP11.73□□□□□ -0.53
PKD1-201ENST00000262304 TATP17735 454 aaPredicted RBP11.73□□□□□ -0.53
PKD1-201ENST00000262304 TCERG1LQ5VWI1 586 aa11.73□□□□□ -0.53
PKD1-201ENST00000262304 NUTM2AQ8IVF1 878 aaPredicted RBP11.73□□□□□ -0.53
PKD1-201ENST00000262304 MYO18AQ92614 2054 aaKnown RBP11.73□□□□□ -0.53
PKD1-201ENST00000262304 SLC4A2P04920 1241 aa11.73□□□□□ -0.53
PKD1-201ENST00000262304 CCDC25Q86WR0 208 aa11.73□□□□□ -0.53
PKD1-201ENST00000262304 CA8P35219 290 aa11.73□□□□□ -0.53
PKD1-201ENST00000262304 CHD1LQ86WJ1 897 aa11.73□□□□□ -0.53
PKD1-201ENST00000262304 CCDC150Q8NCX0 1101 aa11.73□□□□□ -0.53
PKD1-201ENST00000262304 NACAP1Q9BZK3 213 aa11.73□□□□□ -0.53
PKD1-201ENST00000262304 LAMC3Q9Y6N6 1575 aa11.73□□□□□ -0.53
PKD1-201ENST00000262304 CCDC114Q96M63 670 aa11.73□□□□□ -0.53
PKD1-201ENST00000262304 CCDC158Q5M9N0 1113 aa11.72□□□□□ -0.53
PKD1-201ENST00000262304 TCP11L2Q8N4U5 519 aa11.72□□□□□ -0.53
PKD1-201ENST00000262304 IFT81Q8WYA0 676 aa11.72□□□□□ -0.53
PKD1-201ENST00000262304 FAM114A1Q8IWE2 563 aa11.72□□□□□ -0.53
PKD1-201ENST00000262304 PPP2R1AP30153 589 aa11.72□□□□□ -0.53
PKD1-201ENST00000262304 PIP4K2BP78356 416 aa11.72□□□□□ -0.53
PKD1-201ENST00000262304 RAB3IL1Q8TBN0 382 aa11.72□□□□□ -0.53
PKD1-201ENST00000262304 PRXQ9BXM0 1461 aa11.72□□□□□ -0.53
PKD1-201ENST00000262304 CPSF2Q9P2I0 782 aaKnown RBP11.72□□□□□ -0.53
PKD1-201ENST00000262304 IDH1O75874 414 aaKnown RBP11.72□□□□□ -0.53
PKD1-201ENST00000262304 KIF2AO00139 706 aaPredicted RBP11.72□□□□□ -0.53
PKD1-201ENST00000262304 ERCC5P28715 1186 aaPredicted RBP11.72□□□□□ -0.53
PKD1-201ENST00000262304 TOM1L2Q6ZVM7 507 aa11.72□□□□□ -0.53
PKD1-201ENST00000262304 MCM3P25205 808 aa11.72□□□□□ -0.53
PKD1-201ENST00000262304 CCDC57Q2TAC2 916 aa11.72□□□□□ -0.53
PKD1-201ENST00000262304 BICDL1Q6ZP65 573 aa11.72□□□□□ -0.53
PKD1-201ENST00000262304 SH3BP5O60239 455 aa11.72□□□□□ -0.53
PKD1-201ENST00000262304 SSX2IPQ9Y2D8 614 aa11.72□□□□□ -0.53
PKD1-201ENST00000262304 RPGRIP1LQ68CZ1 1315 aa11.72□□□□□ -0.53
PKD1-201ENST00000262304 RHOXF2BP0C7M4 288 aa11.72□□□□□ -0.53
PKD1-201ENST00000262304 ZNF354CQ86Y25 554 aa11.72□□□□□ -0.53
PKD1-201ENST00000262304 RHOXF2Q9BQY4 288 aa11.72□□□□□ -0.53
PKD1-201ENST00000262304 PRC1O43663 620 aa11.71□□□□□ -0.53
PKD1-201ENST00000262304 MORC4Q8TE76 937 aa11.71□□□□□ -0.53
PKD1-201ENST00000262304 TMEM57Q8N5G2 664 aa11.71□□□□□ -0.53
PKD1-201ENST00000262304 MRRFQ96E11 262 aaKnown RBP11.71□□□□□ -0.53
PKD1-201ENST00000262304 KSR1Q8IVT5 923 aa11.71□□□□□ -0.53
PKD1-201ENST00000262304 CDK13Q14004 1512 aaKnown RBP11.71□□□□□ -0.53
PKD1-201ENST00000262304 LCA5Q86VQ0 697 aa11.71□□□□□ -0.53
PKD1-201ENST00000262304 CCDC170Q8IYT3 715 aa11.71□□□□□ -0.53
PKD1-201ENST00000262304 TSNARE1Q96NA8 513 aa11.71□□□□□ -0.53
PKD1-201ENST00000262304 ALS2CR12Q96Q35 445 aa11.71□□□□□ -0.53
PKD1-201ENST00000262304 NOL3O60936 208 aaKnown RBP11.71□□□□□ -0.53
PKD1-201ENST00000262304 DAPK1P53355 1430 aa11.71□□□□□ -0.53
PKD1-201ENST00000262304 TIAM1Q13009 1591 aa11.71□□□□□ -0.53
PKD1-201ENST00000262304 SLC12A5Q9H2X9 1139 aa11.71□□□□□ -0.53
PKD1-201ENST00000262304 ANO10Q9NW15 660 aa11.71□□□□□ -0.53
PKD1-201ENST00000262304 EPRSP07814 1512 aaKnown RBP11.71□□□□□ -0.54
PKD1-201ENST00000262304 CAPN2P17655 700 aa11.71□□□□□ -0.54
PKD1-201ENST00000262304 ZNF530Q6P9A1 599 aaPredicted RBP11.71□□□□□ -0.54
PKD1-201ENST00000262304 TNIP1Q15025 636 aa11.71□□□□□ -0.54
PKD1-201ENST00000262304 MYO9BQ13459 2157 aa11.71□□□□□ -0.54
PKD1-201ENST00000262304 GIMAP6Q6P9H5 292 aa11.71□□□□□ -0.54
PKD1-201ENST00000262304 TNPO1Q92973 898 aaKnown RBP11.71□□□□□ -0.54
PKD1-201ENST00000262304 KCNK9Q9NPC2 374 aa11.71□□□□□ -0.54
PKD1-201ENST00000262304 KARSQ15046 597 aaKnown RBP11.71□□□□□ -0.54
PKD1-201ENST00000262304 PPP4R3AQ6IN85 833 aa11.71□□□□□ -0.54
PKD1-201ENST00000262304 YEATS4O95619 227 aa11.7□□□□□ -0.54
PKD1-201ENST00000262304 CEP120Q8N960 986 aa11.7□□□□□ -0.54
PKD1-201ENST00000262304 CABP4P57796 275 aa11.7□□□□□ -0.54
PKD1-201ENST00000262304 VPS36Q86VN1 386 aa11.7□□□□□ -0.54
PKD1-201ENST00000262304 SEC62Q99442 399 aaKnown RBP11.7□□□□□ -0.54
PKD1-201ENST00000262304 CROCCQ5TZA2 2017 aa11.7□□□□□ -0.54
PKD1-201ENST00000262304 ZNF692Q9BU19 519 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms