RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 PHF23Q9BUL5 403 aaPredicted RBP11.91□□□□□ -0.5
PALB2-201ENST00000261584 RNF216Q9NWF9 866 aaPredicted RBP11.91□□□□□ -0.5
PALB2-201ENST00000261584 ZNF518AQ6AHZ1 1483 aa11.91□□□□□ -0.5
PALB2-201ENST00000261584 SKILP12757 684 aa11.91□□□□□ -0.5
PALB2-201ENST00000261584 RUFY3Q7L099 469 aa11.91□□□□□ -0.5
PALB2-201ENST00000261584 RASSF8Q8NHQ8 419 aa11.91□□□□□ -0.5
PALB2-201ENST00000261584 CPLX3Q8WVH0 158 aa11.91□□□□□ -0.5
PALB2-201ENST00000261584 ECHDC1Q9NTX5 307 aa11.91□□□□□ -0.5
PALB2-201ENST00000261584 TMC6Q7Z403 805 aa11.91□□□□□ -0.5
PALB2-201ENST00000261584 FSIP1Q8NA03 581 aa11.91□□□□□ -0.5
PALB2-201ENST00000261584 MYD88Q99836 296 aa11.91□□□□□ -0.5
PALB2-201ENST00000261584 LGR6Q9HBX8 967 aa11.91□□□□□ -0.5
PALB2-201ENST00000261584 PRDM15P57071 1507 aaPredicted RBP11.91□□□□□ -0.5
PALB2-201ENST00000261584 PTPRCP08575 1304 aa11.91□□□□□ -0.5
PALB2-201ENST00000261584 RXRAP19793 462 aa11.9□□□□□ -0.5
PALB2-201ENST00000261584 TTC5Q8N0Z6 440 aa11.9□□□□□ -0.5
PALB2-201ENST00000261584 SAMD9LQ8IVG5 1584 aa11.9□□□□□ -0.5
PALB2-201ENST00000261584 TRHP20396 242 aaPredicted RBP11.9□□□□□ -0.5
PALB2-201ENST00000261584 ADCY10Q96PN6 1610 aa11.9□□□□□ -0.5
PALB2-201ENST00000261584 SOS1Q07889 1333 aaPredicted RBP11.9□□□□□ -0.5
PALB2-201ENST00000261584 MAP3K19Q56UN5 1328 aa11.9□□□□□ -0.5
PALB2-201ENST00000261584 CEP135Q66GS9 1140 aa11.9□□□□□ -0.5
PALB2-201ENST00000261584 CCAR1Q8IX12 1150 aaKnown RBP11.9□□□□□ -0.5
PALB2-201ENST00000261584 MYRIPQ8NFW9 859 aa11.9□□□□□ -0.5
PALB2-201ENST00000261584 BBXQ8WY36 941 aaPredicted RBP11.9□□□□□ -0.5
PALB2-201ENST00000261584 ZNF500O60304 480 aaPredicted RBP11.89□□□□□ -0.51
PALB2-201ENST00000261584 LMOD1P29536 600 aaPredicted RBP11.89□□□□□ -0.51
PALB2-201ENST00000261584 ATP2B3Q16720 1220 aa11.89□□□□□ -0.51
PALB2-201ENST00000261584 ME3Q16798 604 aa11.89□□□□□ -0.51
PALB2-201ENST00000261584 AOPEPQ8N6M6 819 aa11.89□□□□□ -0.51
PALB2-201ENST00000261584 GOLIM4O00461 696 aa11.89□□□□□ -0.51
PALB2-201ENST00000261584 CHL1O00533 1208 aa11.89□□□□□ -0.51
PALB2-201ENST00000261584 MARCKSP29966 332 aaPredicted RBP11.89□□□□□ -0.51
PALB2-201ENST00000261584 CFAP100Q494V2 611 aa11.89□□□□□ -0.51
PALB2-201ENST00000261584 SLFNL1Q499Z3 407 aa11.89□□□□□ -0.51
PALB2-201ENST00000261584 OSCARQ8IYS5 282 aa11.89□□□□□ -0.51
PALB2-201ENST00000261584 FAM200AQ8TCP9 573 aa11.89□□□□□ -0.51
PALB2-201ENST00000261584 ABCC2Q92887 1545 aa11.89□□□□□ -0.51
PALB2-201ENST00000261584 ZBTB22O15209 634 aa11.89□□□□□ -0.51
PALB2-201ENST00000261584 MCM5P33992 734 aa11.89□□□□□ -0.51
PALB2-201ENST00000261584 PPP6R1Q9UPN7 881 aa11.89□□□□□ -0.51
PALB2-201ENST00000261584 RIMS2Q9UQ26 1411 aa11.89□□□□□ -0.51
PALB2-201ENST00000261584 KLHL10Q6JEL2 608 aa11.89□□□□□ -0.51
PALB2-201ENST00000261584 UBE3BQ7Z3V4 1068 aa11.89□□□□□ -0.51
PALB2-201ENST00000261584 SEC62Q99442 399 aaKnown RBP11.89□□□□□ -0.51
PALB2-201ENST00000261584 USP44Q9H0E7 712 aa11.89□□□□□ -0.51
PALB2-201ENST00000261584 TTC21BQ7Z4L5 1316 aa11.88□□□□□ -0.51
PALB2-201ENST00000261584 CHD1O14646 1710 aa11.88□□□□□ -0.51
PALB2-201ENST00000261584 DDX58O95786 925 aaKnown RBP11.88□□□□□ -0.51
PALB2-201ENST00000261584 CHGBP05060 677 aa11.88□□□□□ -0.51
PALB2-201ENST00000261584 PPARDQ03181 441 aa11.88□□□□□ -0.51
PALB2-201ENST00000261584 RALYLQ86SE5 291 aaKnown RBP11.88□□□□□ -0.51
PALB2-201ENST00000261584 TTC6Q86TZ1 520 aa11.88□□□□□ -0.51
PALB2-201ENST00000261584 CBX8Q9HC52 389 aa11.88□□□□□ -0.51
PALB2-201ENST00000261584 TEX35Q5T0J7 233 aa11.88□□□□□ -0.51
PALB2-201ENST00000261584 CREB3L3Q68CJ9 461 aa11.88□□□□□ -0.51
PALB2-201ENST00000261584 TRPM1Q7Z4N2 1603 aa11.88□□□□□ -0.51
PALB2-201ENST00000261584 EIF2AK4Q9P2K8 1649 aaKnown RBP11.88□□□□□ -0.51
PALB2-201ENST00000261584 A0A1B0GVL5 298 aa11.88□□□□□ -0.51
PALB2-201ENST00000261584 PRIMPOLQ96LW4 560 aa11.88□□□□□ -0.51
PALB2-201ENST00000261584 NSD2O96028 1365 aa11.88□□□□□ -0.51
PALB2-201ENST00000261584 NR1I2O75469 434 aa11.87□□□□□ -0.51
PALB2-201ENST00000261584 APOBRQ0VD83 1088 aa11.87□□□□□ -0.51
PALB2-201ENST00000261584 Q6ZUG5 572 aa11.87□□□□□ -0.51
PALB2-201ENST00000261584 PRAMEF22A3QJZ6 481 aa11.87□□□□□ -0.51
PALB2-201ENST00000261584 IBSPP21815 317 aaPredicted RBP11.87□□□□□ -0.51
PALB2-201ENST00000261584 ELF2Q15723 593 aa11.87□□□□□ -0.51
PALB2-201ENST00000261584 SGSM2O43147 1006 aa11.86□□□□□ -0.51
PALB2-201ENST00000261584 HS1BP3Q53T59 392 aa11.86□□□□□ -0.51
PALB2-201ENST00000261584 CEP57L1Q8IYX8 460 aa11.86□□□□□ -0.51
PALB2-201ENST00000261584 TPCN1Q9ULQ1 816 aa11.86□□□□□ -0.51
PALB2-201ENST00000261584 NLRP1Q9C000 1473 aa11.86□□□□□ -0.51
PALB2-201ENST00000261584 MAST1Q9Y2H9 1570 aa11.86□□□□□ -0.51
PALB2-201ENST00000261584 GOLGA8FQ08AF8 430 aa11.86□□□□□ -0.51
PALB2-201ENST00000261584 GOLGA8DPQ0D2H9 430 aa11.86□□□□□ -0.51
PALB2-201ENST00000261584 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.86□□□□□ -0.51
PALB2-201ENST00000261584 DNAI1Q9UI46 699 aa11.86□□□□□ -0.51
PALB2-201ENST00000261584 ADGBQ8N7X0 1667 aa11.86□□□□□ -0.51
PALB2-201ENST00000261584 SYT10Q6XYQ8 523 aa11.86□□□□□ -0.51
PALB2-201ENST00000261584 CCDC34Q96HJ3 373 aa11.86□□□□□ -0.51
PALB2-201ENST00000261584 ZSCAN31Q96LW9 406 aaPredicted RBP11.86□□□□□ -0.51
PALB2-201ENST00000261584 SCAND2PQ9GZW5 306 aaPredicted RBP11.86□□□□□ -0.51
PALB2-201ENST00000261584 CCDC69A6NI79 296 aa11.85□□□□□ -0.51
PALB2-201ENST00000261584 SFPQP23246 707 aaKnown RBP eCLIP11.85□□□□□ -0.51
PALB2-201ENST00000261584 TLR7Q9NYK1 1049 aaKnown RBP11.85□□□□□ -0.51
PALB2-201ENST00000261584 AMOTL2Q9Y2J4 779 aa11.85□□□□□ -0.51
PALB2-201ENST00000261584 RAPGEF4Q8WZA2 1011 aa11.85□□□□□ -0.51
PALB2-201ENST00000261584 UBXN4Q92575 508 aa11.85□□□□□ -0.51
PALB2-201ENST00000261584 ABCA8O94911 1581 aa11.85□□□□□ -0.51
PALB2-201ENST00000261584 GPIHBP1Q8IV16 184 aa11.85□□□□□ -0.51
PALB2-201ENST00000261584 FAM193AP78312 1265 aa11.84□□□□□ -0.51
PALB2-201ENST00000261584 KIF18AQ8NI77 898 aa11.84□□□□□ -0.51
PALB2-201ENST00000261584 MTMR6Q9Y217 621 aa11.84□□□□□ -0.51
PALB2-201ENST00000261584 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.84□□□□□ -0.51
PALB2-201ENST00000261584 DDIT3P35638 169 aa11.84□□□□□ -0.51
PALB2-201ENST00000261584 SPECC1Q5M775 1068 aa11.84□□□□□ -0.51
PALB2-201ENST00000261584 NEK1Q96PY6 1258 aa11.84□□□□□ -0.51
PALB2-201ENST00000261584 ZBTB3Q9H5J0 574 aa11.84□□□□□ -0.51
PALB2-201ENST00000261584 HSPA4P34932 840 aa11.84□□□□□ -0.51
PALB2-201ENST00000261584 TRDNQ13061 729 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms