RNA–Protein interactions for RNA: ENST00000255304.8

USPL1-201, Transcript of ubiquitin specific peptidase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USPL1, Length 3,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1-201ENST00000255304 HDAC5Q9UQL6 1122 aa9.12□□□□□ -0.95
USPL1-201ENST00000255304 UBE3BQ7Z3V4 1068 aa9.11□□□□□ -0.95
USPL1-201ENST00000255304 PPP1R42Q7Z4L9 355 aa9.11□□□□□ -0.95
USPL1-201ENST00000255304 PIBF1Q8WXW3 757 aa9.11□□□□□ -0.95
USPL1-201ENST00000255304 ADGRL3Q9HAR2 1447 aa9.11□□□□□ -0.95
USPL1-201ENST00000255304 K7ELQ4 463 aaPredicted RBP9.11□□□□□ -0.95
USPL1-201ENST00000255304 MX1P20591 662 aa9.11□□□□□ -0.95
USPL1-201ENST00000255304 KLHDC4Q8TBB5 520 aa9.11□□□□□ -0.95
USPL1-201ENST00000255304 ANKRD24Q8TF21 1146 aa9.11□□□□□ -0.95
USPL1-201ENST00000255304 JAKMIP1Q96N16 626 aaKnown RBP9.11□□□□□ -0.95
USPL1-201ENST00000255304 CD2BP2O95400 341 aaKnown RBP9.11□□□□□ -0.95
USPL1-201ENST00000255304 SMAP1Q8IYB5 467 aaPredicted RBP9.11□□□□□ -0.95
USPL1-201ENST00000255304 CCDC82Q8N4S0 544 aa9.11□□□□□ -0.95
USPL1-201ENST00000255304 ZFP91Q96JP5 570 aaPredicted RBP9.11□□□□□ -0.95
USPL1-201ENST00000255304 AXIN2Q9Y2T1 843 aa9.11□□□□□ -0.95
USPL1-201ENST00000255304 MAP3K2Q9Y2U5 619 aa9.11□□□□□ -0.95
USPL1-201ENST00000255304 ROBO1Q9Y6N7 1651 aa9.11□□□□□ -0.95
USPL1-201ENST00000255304 ABCA3Q99758 1704 aa9.11□□□□□ -0.95
USPL1-201ENST00000255304 C1orf167Q5SNV9 1468 aa9.11□□□□□ -0.95
USPL1-201ENST00000255304 SLC4A8Q2Y0W8 1093 aa9.1□□□□□ -0.95
USPL1-201ENST00000255304 KLHL34Q8N239 644 aa9.1□□□□□ -0.95
USPL1-201ENST00000255304 LGR6Q9HBX8 967 aa9.1□□□□□ -0.95
USPL1-201ENST00000255304 NDUFB9Q9Y6M9 179 aa9.1□□□□□ -0.95
USPL1-201ENST00000255304 G3V3G9 751 aa9.1□□□□□ -0.95
USPL1-201ENST00000255304 PES1O00541 588 aaKnown RBP9.1□□□□□ -0.95
USPL1-201ENST00000255304 DCAF8Q5TAQ9 597 aa9.1□□□□□ -0.95
USPL1-201ENST00000255304 PRPF40BQ6NWY9 871 aaKnown RBP9.1□□□□□ -0.95
USPL1-201ENST00000255304 NFXL1Q6ZNB6 911 aa9.1□□□□□ -0.95
USPL1-201ENST00000255304 U2AF2P26368 475 aaKnown RBP eCLIP9.1□□□□□ -0.956e-6■■■■□ 22.5
USPL1-201ENST00000255304 TTC12Q9H892 705 aaPredicted RBP9.1□□□□□ -0.95
USPL1-201ENST00000255304 CNNM1Q9NRU3 951 aa9.1□□□□□ -0.95
USPL1-201ENST00000255304 USP6P35125 1406 aa9.1□□□□□ -0.95
USPL1-201ENST00000255304 CLSTN1O94985 981 aa9.09□□□□□ -0.95
USPL1-201ENST00000255304 GUCY1B3Q02153 619 aa9.09□□□□□ -0.95
USPL1-201ENST00000255304 KIAA2012Q0VF49 1180 aa9.09□□□□□ -0.95
USPL1-201ENST00000255304 DNAAF4Q8WXU2 420 aa9.09□□□□□ -0.95
USPL1-201ENST00000255304 SYAP1Q96A49 352 aaPredicted RBP9.09□□□□□ -0.95
USPL1-201ENST00000255304 LRRC2Q9BYS8 371 aa9.09□□□□□ -0.95
USPL1-201ENST00000255304 VIRMAQ69YN4 1812 aaKnown RBP9.09□□□□□ -0.95
USPL1-201ENST00000255304 CPA1P15085 419 aa9.09□□□□□ -0.95
USPL1-201ENST00000255304 CASTP20810 708 aaKnown RBP9.09□□□□□ -0.95
USPL1-201ENST00000255304 PKP1Q13835 747 aa9.09□□□□□ -0.95
USPL1-201ENST00000255304 SKOR2Q2VWA4 1001 aaPredicted RBP9.09□□□□□ -0.95
USPL1-201ENST00000255304 RPAP2Q8IXW5 612 aaPredicted RBP9.09□□□□□ -0.95
USPL1-201ENST00000255304 NFATC2IPQ8NCF5 419 aa9.09□□□□□ -0.95
USPL1-201ENST00000255304 WWC3Q9ULE0 1092 aa9.09□□□□□ -0.95
USPL1-201ENST00000255304 SDSP20132 328 aa9.09□□□□□ -0.95
USPL1-201ENST00000255304 MRPL50Q8N5N7 158 aaKnown RBP9.09□□□□□ -0.95
USPL1-201ENST00000255304 SPC24Q8NBT2 197 aa9.09□□□□□ -0.95
USPL1-201ENST00000255304 ZNF592Q92610 1267 aa9.09□□□□□ -0.95
USPL1-201ENST00000255304 PXDNQ92626 1479 aa9.08□□□□□ -0.96
USPL1-201ENST00000255304 A0A087WZG4 1122 aa9.08□□□□□ -0.96
USPL1-201ENST00000255304 ATP2B3Q16720 1220 aa9.08□□□□□ -0.96
USPL1-201ENST00000255304 CCDC83Q8IWF9 413 aa9.08□□□□□ -0.96
USPL1-201ENST00000255304 IQSEC3Q9UPP2 1182 aaPredicted RBP9.08□□□□□ -0.96
USPL1-201ENST00000255304 COL18A1P39060 1754 aa9.08□□□□□ -0.96
USPL1-201ENST00000255304 KCNQ3O43525 872 aa9.08□□□□□ -0.96
USPL1-201ENST00000255304 HSP90AB3PQ58FF7 597 aa9.08□□□□□ -0.96
USPL1-201ENST00000255304 CCDC94Q9BW85 323 aaPredicted RBP9.08□□□□□ -0.96
USPL1-201ENST00000255304 OVOS2A0A0J9YW53 1432 aa9.08□□□□□ -0.96
USPL1-201ENST00000255304 OVOS2Q6IE36 1432 aa9.08□□□□□ -0.96
USPL1-201ENST00000255304 IDH1O75874 414 aaKnown RBP9.08□□□□□ -0.96
USPL1-201ENST00000255304 CT47B1P0C2W7 299 aaPredicted RBP9.08□□□□□ -0.96
USPL1-201ENST00000255304 ZSCAN23Q3MJ62 389 aa9.08□□□□□ -0.96
USPL1-201ENST00000255304 ALDH1L2Q3SY69 923 aa9.08□□□□□ -0.96
USPL1-201ENST00000255304 HSP90AB4PQ58FF6 505 aa9.08□□□□□ -0.96
USPL1-201ENST00000255304 MEX3CQ5U5Q3 659 aaKnown RBP9.08□□□□□ -0.96
USPL1-201ENST00000255304 SASS6Q6UVJ0 657 aa9.08□□□□□ -0.96
USPL1-201ENST00000255304 BRINP3Q76B58 766 aa9.08□□□□□ -0.96
USPL1-201ENST00000255304 POLR3AO14802 1390 aaPredicted RBP9.07□□□□□ -0.96
USPL1-201ENST00000255304 RGPD1P0DJD0 1748 aa9.07□□□□□ -0.96
USPL1-201ENST00000255304 BAG4O95429 457 aaKnown RBP9.07□□□□□ -0.96
USPL1-201ENST00000255304 RABEP1Q15276 862 aa9.07□□□□□ -0.96
USPL1-201ENST00000255304 ACSBG1Q96GR2 724 aa9.07□□□□□ -0.96
USPL1-201ENST00000255304 NFAT5O94916 1531 aa9.07□□□□□ -0.96
USPL1-201ENST00000255304 DHX16O60231 1041 aaKnown RBP9.07□□□□□ -0.96
USPL1-201ENST00000255304 NUCB2P80303 420 aa9.07□□□□□ -0.96
USPL1-201ENST00000255304 VPS53Q5VIR6 699 aa9.07□□□□□ -0.96
USPL1-201ENST00000255304 RNF20Q5VTR2 975 aa9.07□□□□□ -0.96
USPL1-201ENST00000255304 COPS6Q7L5N1 327 aa9.07□□□□□ -0.96
USPL1-201ENST00000255304 RALYLQ86SE5 291 aaKnown RBP9.07□□□□□ -0.96
USPL1-201ENST00000255304 HAND2P61296 217 aa9.07□□□□□ -0.96
USPL1-201ENST00000255304 DMTNQ08495 405 aa9.07□□□□□ -0.96
USPL1-201ENST00000255304 NCBP3Q53F19 620 aaKnown RBP9.07□□□□□ -0.96
USPL1-201ENST00000255304 ZBTB40Q9NUA8 1239 aa9.07□□□□□ -0.96
USPL1-201ENST00000255304 ABCF2Q9UG63 623 aa9.07□□□□□ -0.96
USPL1-201ENST00000255304 BECN2A8MW95 431 aa9.06□□□□□ -0.96
USPL1-201ENST00000255304 PHRF1Q9P1Y6 1649 aaKnown RBP9.06□□□□□ -0.96
USPL1-201ENST00000255304 DYNC1I1O14576 645 aa9.06□□□□□ -0.96
USPL1-201ENST00000255304 GCP02774 474 aa9.06□□□□□ -0.96
USPL1-201ENST00000255304 ZSCAN20P17040 1043 aaPredicted RBP9.06□□□□□ -0.96
USPL1-201ENST00000255304 TRDNQ13061 729 aa9.06□□□□□ -0.96
USPL1-201ENST00000255304 DDX46Q7L014 1031 aaKnown RBP9.06□□□□□ -0.96
USPL1-201ENST00000255304 PDCL2Q8N4E4 241 aa9.06□□□□□ -0.96
USPL1-201ENST00000255304 XAGE3Q8WTP9 111 aa9.06□□□□□ -0.96
USPL1-201ENST00000255304 IL13P35225 146 aa9.06□□□□□ -0.96
USPL1-201ENST00000255304 CAMK4Q16566 473 aa9.06□□□□□ -0.96
USPL1-201ENST00000255304 CCDC57Q2TAC2 916 aa9.06□□□□□ -0.96
USPL1-201ENST00000255304 NECAB1Q8N987 351 aa9.05□□□□□ -0.96
USPL1-201ENST00000255304 ZKSCAN5Q9Y2L8 839 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms