RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 HLFQ16534 295 aa18.49■□□□□ 0.55
CNN1-201ENST00000252456 CLEC4GQ6UXB4 293 aa18.49■□□□□ 0.55
CNN1-201ENST00000252456 BICDL1Q6ZP65 573 aa18.49■□□□□ 0.55
CNN1-201ENST00000252456 NGEFQ8N5V2 710 aa18.49■□□□□ 0.55
CNN1-201ENST00000252456 ZNF521Q96K83 1311 aa18.49■□□□□ 0.55
CNN1-201ENST00000252456 CARMIL3Q8ND23 1372 aa18.49■□□□□ 0.55
CNN1-201ENST00000252456 SERPINB2P05120 415 aa18.49■□□□□ 0.55
CNN1-201ENST00000252456 HDGFL1Q5TGJ6 251 aa18.49■□□□□ 0.55
CNN1-201ENST00000252456 WDR63Q8IWG1 891 aa18.49■□□□□ 0.55
CNN1-201ENST00000252456 SPINK5Q9NQ38 1064 aaPredicted RBP18.48■□□□□ 0.55
CNN1-201ENST00000252456 CHPF2Q9P2E5 772 aa18.48■□□□□ 0.55
CNN1-201ENST00000252456 MAP3K15Q6ZN16 1313 aa18.48■□□□□ 0.55
CNN1-201ENST00000252456 ELL2O00472 640 aaPredicted RBP18.47■□□□□ 0.55
CNN1-201ENST00000252456 TSPYL6Q8N831 410 aa18.47■□□□□ 0.55
CNN1-201ENST00000252456 DDX21Q9NR30 783 aaKnown RBP eCLIP18.47■□□□□ 0.55
CNN1-201ENST00000252456 ANKRD36CQ5JPF3 1778 aa18.47■□□□□ 0.55
CNN1-201ENST00000252456 DLEC1Q9Y238 1755 aa18.47■□□□□ 0.55
CNN1-201ENST00000252456 FANCIQ9NVI1 1328 aa18.47■□□□□ 0.55
CNN1-201ENST00000252456 ERVV-1B6SEH8 477 aa18.46■□□□□ 0.55
CNN1-201ENST00000252456 YBX3P16989 372 aaKnown RBP eCLIP18.46■□□□□ 0.559e-6■■■□□ 18.6
CNN1-201ENST00000252456 ZNF652Q9Y2D9 606 aa18.46■□□□□ 0.55
CNN1-201ENST00000252456 ATP10DQ9P241 1426 aa18.46■□□□□ 0.55
CNN1-201ENST00000252456 TGFB2P61812 414 aa18.45■□□□□ 0.54
CNN1-201ENST00000252456 COL11A2P13942 1736 aaPredicted RBP18.45■□□□□ 0.54
CNN1-201ENST00000252456 KCNA3P22001 575 aa18.45■□□□□ 0.54
CNN1-201ENST00000252456 KIF6Q6ZMV9 814 aa18.45■□□□□ 0.54
CNN1-201ENST00000252456 SETDB2Q96T68 719 aa18.45■□□□□ 0.54
CNN1-201ENST00000252456 ZBTB3Q9H5J0 574 aa18.45■□□□□ 0.54
CNN1-201ENST00000252456 A0A0G2JLW4 131 aa18.44■□□□□ 0.54
CNN1-201ENST00000252456 DPEP1P16444 411 aa18.44■□□□□ 0.54
CNN1-201ENST00000252456 PRR5LQ6MZQ0 368 aa18.44■□□□□ 0.54
CNN1-201ENST00000252456 COPS6Q7L5N1 327 aa18.44■□□□□ 0.54
CNN1-201ENST00000252456 XAGE3Q8WTP9 111 aa18.44■□□□□ 0.54
CNN1-201ENST00000252456 DBF4Q9UBU7 674 aaPredicted RBP18.44■□□□□ 0.54
CNN1-201ENST00000252456 NIP7Q9Y221 180 aaKnown RBP eCLIP18.43■□□□□ 0.54
CNN1-201ENST00000252456 ARFGEF2Q9Y6D5 1785 aa18.42■□□□□ 0.54
CNN1-201ENST00000252456 WWC3Q9ULE0 1092 aa18.42■□□□□ 0.54
CNN1-201ENST00000252456 CHD4Q14839 1912 aa18.42■□□□□ 0.54
CNN1-201ENST00000252456 GPR162Q16538 588 aa18.41■□□□□ 0.54
CNN1-201ENST00000252456 GIGYF2Q6Y7W6 1299 aaKnown RBP18.41■□□□□ 0.54
CNN1-201ENST00000252456 CCDC24Q8N4L8 307 aa18.41■□□□□ 0.54
CNN1-201ENST00000252456 UBN2Q6ZU65 1347 aa18.41■□□□□ 0.54
CNN1-201ENST00000252456 ARFGEF1Q9Y6D6 1849 aa18.41■□□□□ 0.54
CNN1-201ENST00000252456 DCAF8L1A6NGE4 600 aa18.41■□□□□ 0.54
CNN1-201ENST00000252456 CHRNA5P30532 468 aa18.41■□□□□ 0.54
CNN1-201ENST00000252456 AIMP1Q12904 312 aaKnown RBP18.41■□□□□ 0.54
CNN1-201ENST00000252456 PELP1Q8IZL8 1130 aaKnown RBP18.41■□□□□ 0.54
CNN1-201ENST00000252456 TNRC6CQ9HCJ0 1690 aaKnown RBP18.4■□□□□ 0.54
CNN1-201ENST00000252456 TWISTNBQ3B726 338 aaPredicted RBP18.4■□□□□ 0.54
CNN1-201ENST00000252456 ZNF34Q8IZ26 560 aa18.4■□□□□ 0.54
CNN1-201ENST00000252456 CNBD1Q8NA66 436 aa18.4■□□□□ 0.54
CNN1-201ENST00000252456 HYPKQ9NX55 129 aa18.4■□□□□ 0.54
CNN1-201ENST00000252456 GPTP24298 496 aa18.38■□□□□ 0.53
CNN1-201ENST00000252456 EXOSC9Q06265 439 aaKnown RBP18.38■□□□□ 0.53
CNN1-201ENST00000252456 NBPF5PQ86XG9 351 aaPredicted RBP18.38■□□□□ 0.53
CNN1-201ENST00000252456 PHAXQ9H814 394 aaKnown RBP18.38■□□□□ 0.53
CNN1-201ENST00000252456 IBTKQ9P2D0 1353 aaPredicted RBP18.38■□□□□ 0.53
CNN1-201ENST00000252456 CACNA1FO60840 1977 aa18.38■□□□□ 0.53
CNN1-201ENST00000252456 GOLGA2Q08379 1002 aa18.38■□□□□ 0.53
CNN1-201ENST00000252456 CCDC30Q5VVM6 783 aa18.38■□□□□ 0.53
CNN1-201ENST00000252456 BRIP1Q9BX63 1249 aa18.38■□□□□ 0.53
CNN1-201ENST00000252456 MYH16Q9H6N6 1097 aa18.37■□□□□ 0.53
CNN1-201ENST00000252456 ABCC12Q96J65 1359 aa18.36■□□□□ 0.53
CNN1-201ENST00000252456 FAM177BA6PVY3 158 aa18.36■□□□□ 0.53
CNN1-201ENST00000252456 VAMP4O75379 141 aa18.36■□□□□ 0.53
CNN1-201ENST00000252456 PLBD2Q8NHP8 589 aa18.36■□□□□ 0.53
CNN1-201ENST00000252456 CACNA1SQ13698 1873 aa18.35■□□□□ 0.53
CNN1-201ENST00000252456 TCERG1O14776 1098 aaKnown RBP18.35■□□□□ 0.53
CNN1-201ENST00000252456 ST5P78524 1137 aa18.35■□□□□ 0.53
CNN1-201ENST00000252456 SUSD4Q5VX71 490 aa18.35■□□□□ 0.53
CNN1-201ENST00000252456 TPTE2Q6XPS3 522 aa18.35■□□□□ 0.53
CNN1-201ENST00000252456 ANKRD13DQ6ZTN6 518 aa18.35■□□□□ 0.53
CNN1-201ENST00000252456 PIM2Q9P1W9 311 aa18.35■□□□□ 0.53
CNN1-201ENST00000252456 GRIN3BO60391 1043 aa18.34■□□□□ 0.53
CNN1-201ENST00000252456 NTSR2O95665 410 aa18.34■□□□□ 0.53
CNN1-201ENST00000252456 TCIRG1Q13488 830 aa18.34■□□□□ 0.53
CNN1-201ENST00000252456 C2CD5Q86YS7 1000 aa18.34■□□□□ 0.53
CNN1-201ENST00000252456 BCS1LQ9Y276 419 aa18.34■□□□□ 0.53
CNN1-201ENST00000252456 RIC1Q4ADV7 1423 aa18.34■□□□□ 0.53
CNN1-201ENST00000252456 KLRG2A4D1S0 409 aaPredicted RBP18.34■□□□□ 0.53
CNN1-201ENST00000252456 PDE6BP35913 854 aa18.34■□□□□ 0.53
CNN1-201ENST00000252456 NUTM1Q86Y26 1132 aa18.34■□□□□ 0.53
CNN1-201ENST00000252456 CHMP4AQ9BY43 222 aa18.34■□□□□ 0.53
CNN1-201ENST00000252456 H0YIN7 160 aa18.33■□□□□ 0.52
CNN1-201ENST00000252456 NPHP1O15259 732 aa18.33■□□□□ 0.52
CNN1-201ENST00000252456 SLFN5Q08AF3 891 aa18.33■□□□□ 0.52
CNN1-201ENST00000252456 PARP10Q53GL7 1025 aa18.33■□□□□ 0.52
CNN1-201ENST00000252456 HSP90AB3PQ58FF7 597 aa18.33■□□□□ 0.52
CNN1-201ENST00000252456 NLRP10Q86W26 655 aa18.33■□□□□ 0.52
CNN1-201ENST00000252456 CDCA7LQ96GN5 454 aa18.33■□□□□ 0.52
CNN1-201ENST00000252456 LAMB2P55268 1798 aa18.32■□□□□ 0.52
CNN1-201ENST00000252456 ERFEQ4G0M1 354 aa18.32■□□□□ 0.52
CNN1-201ENST00000252456 DALRD3Q5D0E6 543 aaKnown RBP18.32■□□□□ 0.52
CNN1-201ENST00000252456 G2E3Q7L622 706 aa18.32■□□□□ 0.52
CNN1-201ENST00000252456 NYXQ9GZU5 481 aa18.32■□□□□ 0.52
CNN1-201ENST00000252456 SLX4Q8IY92 1834 aa18.31■□□□□ 0.52
CNN1-201ENST00000252456 E9PSI1 815 aa18.31■□□□□ 0.52
CNN1-201ENST00000252456 SRGNP10124 158 aa18.31■□□□□ 0.52
CNN1-201ENST00000252456 ISCA1Q9BUE6 129 aa18.31■□□□□ 0.52
CNN1-201ENST00000252456 STK31Q9BXU1 1019 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms