RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 EIF2S2P20042 333 aaKnown RBP18.64■□□□□ 0.57
GPN3-201ENST00000228827 PDE6BP35913 854 aa18.64■□□□□ 0.57
GPN3-201ENST00000228827 NBPF5PQ86XG9 351 aaPredicted RBP18.64■□□□□ 0.57
GPN3-201ENST00000228827 TTLL6Q8N841 843 aa18.64■□□□□ 0.57
GPN3-201ENST00000228827 ZNF622Q969S3 477 aaKnown RBP eCLIP18.64■□□□□ 0.57
GPN3-201ENST00000228827 C9orf131Q5VYM1 1079 aa18.63■□□□□ 0.57
GPN3-201ENST00000228827 TTLL7Q6ZT98 887 aa18.63■□□□□ 0.57
GPN3-201ENST00000228827 LAMB4A4D0S4 1761 aa18.63■□□□□ 0.57
GPN3-201ENST00000228827 BCORQ6W2J9 1755 aa18.63■□□□□ 0.57
GPN3-201ENST00000228827 BRCA1P38398 1863 aaKnown RBP18.62■□□□□ 0.57
GPN3-201ENST00000228827 C1QTNF8P60827 252 aa18.62■□□□□ 0.57
GPN3-201ENST00000228827 NECTIN2Q92692 538 aa18.62■□□□□ 0.57
GPN3-201ENST00000228827 BABAM1Q9NWV8 329 aa18.62■□□□□ 0.57
GPN3-201ENST00000228827 CCDC184Q52MB2 194 aa18.61■□□□□ 0.57
GPN3-201ENST00000228827 KIF6Q6ZMV9 814 aa18.61■□□□□ 0.57
GPN3-201ENST00000228827 ZBTB3Q9H5J0 574 aa18.61■□□□□ 0.57
GPN3-201ENST00000228827 ZNF219Q9P2Y4 722 aaPredicted RBP18.61■□□□□ 0.57
GPN3-201ENST00000228827 APAF1O14727 1248 aa18.6■□□□□ 0.57
GPN3-201ENST00000228827 RASSF7Q02833 373 aa18.6■□□□□ 0.57
GPN3-201ENST00000228827 KRT24Q2M2I5 525 aa18.6■□□□□ 0.57
GPN3-201ENST00000228827 MAP3K15Q6ZN16 1313 aa18.6■□□□□ 0.57
GPN3-201ENST00000228827 CHL1O00533 1208 aa18.59■□□□□ 0.57
GPN3-201ENST00000228827 ANXA1P04083 346 aa18.59■□□□□ 0.57
GPN3-201ENST00000228827 RNF181Q9P0P0 153 aa18.59■□□□□ 0.57
GPN3-201ENST00000228827 RGL2O15211 777 aa18.58■□□□□ 0.57
GPN3-201ENST00000228827 PROSER3Q2NL68 480 aa18.58■□□□□ 0.57
GPN3-201ENST00000228827 TPTE2Q6XPS3 522 aa18.58■□□□□ 0.57
GPN3-201ENST00000228827 PDZRN3Q9UPQ7 1066 aa18.58■□□□□ 0.57
GPN3-201ENST00000228827 ERBB4Q15303 1308 aa18.58■□□□□ 0.57
GPN3-201ENST00000228827 ERVV-1B6SEH8 477 aa18.58■□□□□ 0.56
GPN3-201ENST00000228827 ARFGEF1Q9Y6D6 1849 aa18.57■□□□□ 0.56
GPN3-201ENST00000228827 C21orf2O43822 256 aa18.57■□□□□ 0.56
GPN3-201ENST00000228827 GPTP24298 496 aa18.57■□□□□ 0.56
GPN3-201ENST00000228827 GTF2E1P29083 439 aaPredicted RBP18.57■□□□□ 0.56
GPN3-201ENST00000228827 PDIA6Q15084 440 aa18.57■□□□□ 0.56
GPN3-201ENST00000228827 SENP3-EIF4A1A0A087X0R7 540 aa18.56■□□□□ 0.56
GPN3-201ENST00000228827 SRGNP10124 158 aa18.56■□□□□ 0.56
GPN3-201ENST00000228827 MASTLQ96GX5 879 aa18.56■□□□□ 0.56
GPN3-201ENST00000228827 ANKRD31Q8N7Z5 1873 aa18.56■□□□□ 0.56
GPN3-201ENST00000228827 STYK1Q6J9G0 422 aa18.55■□□□□ 0.56
GPN3-201ENST00000228827 LRP10Q7Z4F1 713 aa18.55■□□□□ 0.56
GPN3-201ENST00000228827 NUTM1Q86Y26 1132 aa18.55■□□□□ 0.56
GPN3-201ENST00000228827 ANP32CO43423 234 aa18.54■□□□□ 0.56
GPN3-201ENST00000228827 PRELPP51888 382 aa18.54■□□□□ 0.56
GPN3-201ENST00000228827 AIMP1Q12904 312 aaKnown RBP18.54■□□□□ 0.56
GPN3-201ENST00000228827 CNKSR1Q969H4 720 aa18.54■□□□□ 0.56
GPN3-201ENST00000228827 CFAP44Q96MT7 982 aa18.54■□□□□ 0.56
GPN3-201ENST00000228827 COL11A2P13942 1736 aaPredicted RBP18.54■□□□□ 0.56
GPN3-201ENST00000228827 UBN2Q6ZU65 1347 aa18.54■□□□□ 0.56
GPN3-201ENST00000228827 DLEC1Q9Y238 1755 aa18.54■□□□□ 0.56
GPN3-201ENST00000228827 NFKBIEO00221 500 aa18.53■□□□□ 0.56
GPN3-201ENST00000228827 PRPF40BQ6NWY9 871 aaKnown RBP18.53■□□□□ 0.56
GPN3-201ENST00000228827 NYXQ9GZU5 481 aa18.53■□□□□ 0.56
GPN3-201ENST00000228827 MBIPQ9NS73 344 aa18.53■□□□□ 0.56
GPN3-201ENST00000228827 ERFEQ4G0M1 354 aa18.52■□□□□ 0.56
GPN3-201ENST00000228827 SUSD4Q5VX71 490 aa18.52■□□□□ 0.56
GPN3-201ENST00000228827 GIGYF2Q6Y7W6 1299 aaKnown RBP18.52■□□□□ 0.56
GPN3-201ENST00000228827 COPS6Q7L5N1 327 aa18.52■□□□□ 0.56
GPN3-201ENST00000228827 XAGE3Q8WTP9 111 aa18.52■□□□□ 0.56
GPN3-201ENST00000228827 MRS2Q9HD23 443 aa18.52■□□□□ 0.56
GPN3-201ENST00000228827 KIF3CO14782 793 aa18.52■□□□□ 0.55
GPN3-201ENST00000228827 NPR1P16066 1061 aa18.52■□□□□ 0.55
GPN3-201ENST00000228827 LMNB1P20700 586 aa18.52■□□□□ 0.55
GPN3-201ENST00000228827 HDGFL1Q5TGJ6 251 aa18.52■□□□□ 0.55
GPN3-201ENST00000228827 ZNF34Q8IZ26 560 aa18.52■□□□□ 0.55
GPN3-201ENST00000228827 ABCC12Q96J65 1359 aa18.52■□□□□ 0.55
GPN3-201ENST00000228827 NMRK2Q9NPI5 230 aa18.52■□□□□ 0.55
GPN3-201ENST00000228827 CHPF2Q9P2E5 772 aa18.52■□□□□ 0.55
GPN3-201ENST00000228827 KLRG2A4D1S0 409 aaPredicted RBP18.51■□□□□ 0.55
GPN3-201ENST00000228827 DDX21Q9NR30 783 aaKnown RBP eCLIP18.51■□□□□ 0.55
GPN3-201ENST00000228827 ZNF853P0CG23 659 aa18.5■□□□□ 0.55
GPN3-201ENST00000228827 CALD1Q05682 793 aaKnown RBP18.5■□□□□ 0.55
GPN3-201ENST00000228827 DUSP27Q5VZP5 1158 aa18.5■□□□□ 0.55
GPN3-201ENST00000228827 IFT57Q9NWB7 429 aa18.5■□□□□ 0.55
GPN3-201ENST00000228827 GNAI1P63096 354 aa18.49■□□□□ 0.55
GPN3-201ENST00000228827 ELL2O00472 640 aaPredicted RBP18.48■□□□□ 0.55
GPN3-201ENST00000228827 NTSR2O95665 410 aa18.48■□□□□ 0.55
GPN3-201ENST00000228827 HOXB7P09629 217 aa18.48■□□□□ 0.55
GPN3-201ENST00000228827 PPP1R42Q7Z4L9 355 aa18.48■□□□□ 0.55
GPN3-201ENST00000228827 KDM2BQ8NHM5 1336 aa18.47■□□□□ 0.55
GPN3-201ENST00000228827 PARP10Q53GL7 1025 aa18.47■□□□□ 0.55
GPN3-201ENST00000228827 OLFM4Q6UX06 510 aa18.47■□□□□ 0.55
GPN3-201ENST00000228827 TAOK3Q9H2K8 898 aa18.47■□□□□ 0.55
GPN3-201ENST00000228827 SOGA3Q5TF21 947 aa18.46■□□□□ 0.55
GPN3-201ENST00000228827 C7orf43Q8WVR3 580 aa18.46■□□□□ 0.55
GPN3-201ENST00000228827 ZNF428Q96B54 188 aa18.46■□□□□ 0.55
GPN3-201ENST00000228827 UTP14AQ9BVJ6 771 aaKnown RBP18.46■□□□□ 0.55
GPN3-201ENST00000228827 RRAGCQ9HB90 399 aa18.46■□□□□ 0.55
GPN3-201ENST00000228827 DBF4Q9UBU7 674 aaPredicted RBP18.46■□□□□ 0.55
GPN3-201ENST00000228827 IBTKQ9P2D0 1353 aaPredicted RBP18.46■□□□□ 0.55
GPN3-201ENST00000228827 TNRC6CQ9HCJ0 1690 aaKnown RBP18.46■□□□□ 0.55
GPN3-201ENST00000228827 CCDC93Q567U6 631 aa18.46■□□□□ 0.54
GPN3-201ENST00000228827 RPGRQ92834 1020 aaKnown RBP18.46■□□□□ 0.54
GPN3-201ENST00000228827 ALDH1B1P30837 517 aa18.45■□□□□ 0.54
GPN3-201ENST00000228827 CRY2Q49AN0 593 aa18.45■□□□□ 0.54
GPN3-201ENST00000228827 HSP90AB3PQ58FF7 597 aa18.45■□□□□ 0.54
GPN3-201ENST00000228827 C3orf67Q6ZVT6 689 aa18.45■□□□□ 0.54
GPN3-201ENST00000228827 NUP98P52948 1817 aa18.44■□□□□ 0.54
GPN3-201ENST00000228827 SLX4Q8IY92 1834 aa18.44■□□□□ 0.54
GPN3-201ENST00000228827 ZC3H4Q9UPT8 1303 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms