RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 PRPF40BQ6NWY9 871 aaKnown RBP14.88□□□□□ -0.03
NUP88-201ENST00000225696 PI4KAP1Q8N8J0 262 aa14.88□□□□□ -0.03
NUP88-201ENST00000225696 SPC24Q8NBT2 197 aa14.88□□□□□ -0.03
NUP88-201ENST00000225696 NGDNQ8NEJ9 315 aaKnown RBP14.88□□□□□ -0.03
NUP88-201ENST00000225696 CHMP3Q9Y3E7 222 aa14.88□□□□□ -0.03
NUP88-201ENST00000225696 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.88□□□□□ -0.03
NUP88-201ENST00000225696 NLRP6P59044 892 aa14.87□□□□□ -0.03
NUP88-201ENST00000225696 CNTROBQ8N137 903 aa14.87□□□□□ -0.03
NUP88-201ENST00000225696 KIF1BPQ96EK5 621 aa14.87□□□□□ -0.03
NUP88-201ENST00000225696 JAKMIP1Q96N16 626 aaKnown RBP14.87□□□□□ -0.03
NUP88-201ENST00000225696 SPTLC3Q9NUV7 552 aa14.87□□□□□ -0.03
NUP88-201ENST00000225696 CHPF2Q9P2E5 772 aa14.87□□□□□ -0.03
NUP88-201ENST00000225696 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.87□□□□□ -0.03
NUP88-201ENST00000225696 EPB41L2O43491 1005 aaKnown RBP14.87□□□□□ -0.03
NUP88-201ENST00000225696 HTATSF1O43719 755 aaKnown RBP14.87□□□□□ -0.03
NUP88-201ENST00000225696 HOXC9P31274 260 aa14.87□□□□□ -0.03
NUP88-201ENST00000225696 ME3Q16798 604 aa14.87□□□□□ -0.03
NUP88-201ENST00000225696 MAP3K5Q99683 1374 aa14.86□□□□□ -0.03
NUP88-201ENST00000225696 VPS37CA5D8V6 355 aaPredicted RBP14.86□□□□□ -0.03
NUP88-201ENST00000225696 BEND3Q5T5X7 828 aa14.86□□□□□ -0.03
NUP88-201ENST00000225696 LGR6Q9HBX8 967 aa14.86□□□□□ -0.03
NUP88-201ENST00000225696 PA2G4Q9UQ80 394 aaKnown RBP14.86□□□□□ -0.03
NUP88-201ENST00000225696 NWD1Q149M9 1564 aa14.86□□□□□ -0.03
NUP88-201ENST00000225696 HDGFP51858 240 aaKnown RBP14.85□□□□□ -0.03
NUP88-201ENST00000225696 FERMT3Q86UX7 667 aa14.85□□□□□ -0.03
NUP88-201ENST00000225696 PDRG1Q9NUG6 133 aa14.85□□□□□ -0.03
NUP88-201ENST00000225696 TTC21AQ8NDW8 1320 aa14.85□□□□□ -0.03
NUP88-201ENST00000225696 CAMK4Q16566 473 aa14.85□□□□□ -0.03
NUP88-201ENST00000225696 KIAA1524Q8TCG1 905 aa14.85□□□□□ -0.03
NUP88-201ENST00000225696 TCEANC2Q96MN5 208 aa14.85□□□□□ -0.03
NUP88-201ENST00000225696 CCDC94Q9BW85 323 aaPredicted RBP14.85□□□□□ -0.03
NUP88-201ENST00000225696 TAF6LQ9Y6J9 622 aa14.85□□□□□ -0.03
NUP88-201ENST00000225696 PXDNLA1KZ92 1463 aa14.85□□□□□ -0.03
NUP88-201ENST00000225696 LETM1O95202 739 aaPredicted RBP14.84□□□□□ -0.03
NUP88-201ENST00000225696 PRIMPOLQ96LW4 560 aa14.84□□□□□ -0.03
NUP88-201ENST00000225696 TPCN1Q9ULQ1 816 aa14.84□□□□□ -0.03
NUP88-201ENST00000225696 TNRQ92752 1358 aa14.84□□□□□ -0.03
NUP88-201ENST00000225696 RGPD8O14715 1765 aaPredicted RBP14.84□□□□□ -0.03
NUP88-201ENST00000225696 GTF2F1P35269 517 aaKnown RBP eCLIP14.84□□□□□ -0.03
NUP88-201ENST00000225696 HMGN5P82970 282 aaKnown RBP14.84□□□□□ -0.03
NUP88-201ENST00000225696 MTERF4Q7Z6M4 381 aaKnown RBP14.84□□□□□ -0.03
NUP88-201ENST00000225696 TTC6Q86TZ1 520 aa14.84□□□□□ -0.03
NUP88-201ENST00000225696 ZSWIM6Q9HCJ5 1215 aa14.84□□□□□ -0.03
NUP88-201ENST00000225696 DIAPH3Q9NSV4 1193 aa14.84□□□□□ -0.03
NUP88-201ENST00000225696 LIG1P18858 919 aa14.83□□□□□ -0.04
NUP88-201ENST00000225696 CDC37L1Q7L3B6 337 aa14.83□□□□□ -0.04
NUP88-201ENST00000225696 DNAAF4Q8WXU2 420 aa14.83□□□□□ -0.04
NUP88-201ENST00000225696 FAM227BQ96M60 508 aa14.83□□□□□ -0.04
NUP88-201ENST00000225696 AMOTL2Q9Y2J4 779 aa14.83□□□□□ -0.04
NUP88-201ENST00000225696 FER1L4A9Z1Z3 1794 aa14.83□□□□□ -0.04
NUP88-201ENST00000225696 PIK3C2AO00443 1686 aa14.83□□□□□ -0.04
NUP88-201ENST00000225696 N4BP2Q86UW6 1770 aaPredicted RBP14.83□□□□□ -0.04
NUP88-201ENST00000225696 EIF4A1P60842 406 aaKnown RBP14.83□□□□□ -0.04
NUP88-201ENST00000225696 OS9Q13438 667 aaPredicted RBP14.83□□□□□ -0.04
NUP88-201ENST00000225696 ATP2B3Q16720 1220 aa14.83□□□□□ -0.04
NUP88-201ENST00000225696 VPS53Q5VIR6 699 aa14.83□□□□□ -0.04
NUP88-201ENST00000225696 BCL2L12Q9HB09 334 aa14.83□□□□□ -0.04
NUP88-201ENST00000225696 CACNA1FO60840 1977 aa14.82□□□□□ -0.04
NUP88-201ENST00000225696 NECTIN1Q15223 517 aa14.82□□□□□ -0.04
NUP88-201ENST00000225696 LUZP1Q86V48 1076 aa14.82□□□□□ -0.04
NUP88-201ENST00000225696 ADCY9O60503 1353 aa14.82□□□□□ -0.04
NUP88-201ENST00000225696 GLRX3O76003 335 aaKnown RBP14.81□□□□□ -0.04
NUP88-201ENST00000225696 ATP6V1DQ9Y5K8 247 aa14.81□□□□□ -0.04
NUP88-201ENST00000225696 CYP46A1Q9Y6A2 500 aa14.81□□□□□ -0.04
NUP88-201ENST00000225696 USP42Q9H9J4 1324 aaKnown RBP14.81□□□□□ -0.04
NUP88-201ENST00000225696 CBX1P83916 185 aa14.81□□□□□ -0.04
NUP88-201ENST00000225696 CKAP2LQ8IYA6 745 aa14.81□□□□□ -0.04
NUP88-201ENST00000225696 SMAP1Q8IYB5 467 aaPredicted RBP14.81□□□□□ -0.04
NUP88-201ENST00000225696 KIF3AQ9Y496 699 aa14.81□□□□□ -0.04
NUP88-201ENST00000225696 CRYBG1Q9Y4K1 1723 aa14.81□□□□□ -0.04
NUP88-201ENST00000225696 RIOK3O14730 519 aaKnown RBP14.8□□□□□ -0.04
NUP88-201ENST00000225696 PTGS1P23219 599 aa14.8□□□□□ -0.04
NUP88-201ENST00000225696 PROSER3Q2NL68 480 aa14.8□□□□□ -0.04
NUP88-201ENST00000225696 KCNB2Q92953 911 aa14.8□□□□□ -0.04
NUP88-201ENST00000225696 TFIP11Q9UBB9 837 aaKnown RBP14.8□□□□□ -0.04
NUP88-201ENST00000225696 RBM8AQ9Y5S9 174 aaKnown RBP14.8□□□□□ -0.04
NUP88-201ENST00000225696 MRVI1Q9Y6F6 885 aa14.8□□□□□ -0.04
NUP88-201ENST00000225696 UBR1Q8IWV7 1749 aa14.8□□□□□ -0.04
NUP88-201ENST00000225696 TTC41PQ6P2S7 1318 aa14.8□□□□□ -0.04
NUP88-201ENST00000225696 CWF19L2Q2TBE0 894 aaKnown RBP14.8□□□□□ -0.04
NUP88-201ENST00000225696 PPP4R3BQ5MIZ7 849 aa14.8□□□□□ -0.04
NUP88-201ENST00000225696 LARP1BQ659C4 914 aaKnown RBP14.8□□□□□ -0.04
NUP88-201ENST00000225696 CREB3L3Q68CJ9 461 aa14.8□□□□□ -0.04
NUP88-201ENST00000225696 ECHDC1Q9NTX5 307 aa14.8□□□□□ -0.04
NUP88-201ENST00000225696 NRBP1Q9UHY1 535 aa14.8□□□□□ -0.04
NUP88-201ENST00000225696 CCDC171Q6TFL3 1326 aa14.79□□□□□ -0.04
NUP88-201ENST00000225696 PRAMEF22A3QJZ6 481 aa14.79□□□□□ -0.04
NUP88-201ENST00000225696 ZSCAN20P17040 1043 aaPredicted RBP14.79□□□□□ -0.04
NUP88-201ENST00000225696 CEBPAP49715 358 aaPredicted RBP14.79□□□□□ -0.04
NUP88-201ENST00000225696 LRMPQ12912 555 aa14.79□□□□□ -0.04
NUP88-201ENST00000225696 CLASRPQ8N2M8 674 aaKnown RBP14.79□□□□□ -0.04
NUP88-201ENST00000225696 TLR7Q9NYK1 1049 aaKnown RBP14.79□□□□□ -0.04
NUP88-201ENST00000225696 ZHX1Q9UKY1 873 aaPredicted RBP14.79□□□□□ -0.04
NUP88-201ENST00000225696 CEMIPQ8WUJ3 1361 aa14.79□□□□□ -0.04
NUP88-201ENST00000225696 CCDC192P0DO97 292 aa14.78□□□□□ -0.04
NUP88-201ENST00000225696 NMIQ13287 307 aaPredicted RBP14.78□□□□□ -0.04
NUP88-201ENST00000225696 TYRO3Q06418 890 aa14.78□□□□□ -0.04
NUP88-201ENST00000225696 NBPF6Q5VWK0 638 aa14.78□□□□□ -0.04
NUP88-201ENST00000225696 AACSQ86V21 672 aa14.78□□□□□ -0.04
NUP88-201ENST00000225696 ABTB2Q8N961 1025 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms