RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 C4BP0C0L5 1744 aa12.61□□□□□ -0.39
RTCB-201ENST00000216038 PDE3AQ14432 1141 aa12.61□□□□□ -0.39
RTCB-201ENST00000216038 SLC27A3Q5K4L6 730 aa12.61□□□□□ -0.39
RTCB-201ENST00000216038 ANKRD13DQ6ZTN6 518 aa12.61□□□□□ -0.39
RTCB-201ENST00000216038 RIC3Q7Z5B4 369 aa12.61□□□□□ -0.39
RTCB-201ENST00000216038 NPM2Q86SE8 214 aaKnown RBP12.61□□□□□ -0.39
RTCB-201ENST00000216038 PHF14O94880 888 aa12.6□□□□□ -0.39
RTCB-201ENST00000216038 EIF5P55010 431 aaKnown RBP12.6□□□□□ -0.39
RTCB-201ENST00000216038 NOP58Q9Y2X3 529 aaKnown RBP12.6□□□□□ -0.39
RTCB-201ENST00000216038 ABCC4O15439 1325 aa12.6□□□□□ -0.39
RTCB-201ENST00000216038 DDX58O95786 925 aaKnown RBP12.59□□□□□ -0.39
RTCB-201ENST00000216038 IL6STP40189 918 aaPredicted RBP12.59□□□□□ -0.39
RTCB-201ENST00000216038 KSR2Q6VAB6 950 aa12.59□□□□□ -0.39
RTCB-201ENST00000216038 DNAAF4Q8WXU2 420 aa12.59□□□□□ -0.39
RTCB-201ENST00000216038 AK7Q96M32 723 aa12.59□□□□□ -0.39
RTCB-201ENST00000216038 CAMKK2Q96RR4 588 aa12.59□□□□□ -0.39
RTCB-201ENST00000216038 CNTNAP4Q9C0A0 1308 aa12.59□□□□□ -0.39
RTCB-201ENST00000216038 ARFGEF2Q9Y6D5 1785 aa12.59□□□□□ -0.39
RTCB-201ENST00000216038 DZIP3Q86Y13 1208 aaKnown RBP12.59□□□□□ -0.39
RTCB-201ENST00000216038 RREB1Q92766 1687 aa12.59□□□□□ -0.39
RTCB-201ENST00000216038 SRCAPQ6ZRS2 3230 aa12.59□□□□□ -0.39
RTCB-201ENST00000216038 BAG6P46379 1132 aa12.58□□□□□ -0.4
RTCB-201ENST00000216038 MVPQ14764 893 aaKnown RBP12.58□□□□□ -0.4
RTCB-201ENST00000216038 COL15A1P39059 1388 aa12.58□□□□□ -0.4
RTCB-201ENST00000216038 ATP5J2-PTCD1G3V325 749 aa12.57□□□□□ -0.4
RTCB-201ENST00000216038 MS4A1P11836 297 aa12.57□□□□□ -0.4
RTCB-201ENST00000216038 CWF19L2Q2TBE0 894 aaKnown RBP12.57□□□□□ -0.4
RTCB-201ENST00000216038 RC3H1Q5TC82 1133 aaKnown RBP12.57□□□□□ -0.4
RTCB-201ENST00000216038 KIF6Q6ZMV9 814 aa12.57□□□□□ -0.4
RTCB-201ENST00000216038 ILDR2Q71H61 639 aa12.57□□□□□ -0.4
RTCB-201ENST00000216038 PLBD2Q8NHP8 589 aa12.57□□□□□ -0.4
RTCB-201ENST00000216038 MYD88Q99836 296 aa12.57□□□□□ -0.4
RTCB-201ENST00000216038 RTCBQ9Y3I0 505 aaKnown RBP12.57□□□□□ -0.4
RTCB-201ENST00000216038 RPS6KA4O75676 772 aa12.57□□□□□ -0.4
RTCB-201ENST00000216038 HLFQ16534 295 aa12.57□□□□□ -0.4
RTCB-201ENST00000216038 ZNF827Q17R98 1081 aa12.57□□□□□ -0.4
RTCB-201ENST00000216038 PPP4R2Q9NY27 417 aa12.57□□□□□ -0.4
RTCB-201ENST00000216038 UBR3Q6ZT12 1888 aa12.57□□□□□ -0.4
RTCB-201ENST00000216038 NUP188Q5SRE5 1749 aa12.57□□□□□ -0.4
RTCB-201ENST00000216038 RGPD3A6NKT7 1758 aaPredicted RBP12.56□□□□□ -0.4
RTCB-201ENST00000216038 RGPD4Q7Z3J3 1758 aa12.56□□□□□ -0.4
RTCB-201ENST00000216038 GOLGB1Q14789 3259 aaKnown RBP12.56□□□□□ -0.4
RTCB-201ENST00000216038 INTS3Q68E01 1043 aaKnown RBP12.56□□□□□ -0.4
RTCB-201ENST00000216038 MAP3K15Q6ZN16 1313 aa12.56□□□□□ -0.4
RTCB-201ENST00000216038 NUP98P52948 1817 aa12.56□□□□□ -0.4
RTCB-201ENST00000216038 BEND3Q5T5X7 828 aa12.55□□□□□ -0.4
RTCB-201ENST00000216038 ARHGEF1Q92888 912 aaKnown RBP12.55□□□□□ -0.4
RTCB-201ENST00000216038 TFCP2L1Q9NZI6 479 aa12.55□□□□□ -0.4
RTCB-201ENST00000216038 SRP68Q9UHB9 627 aaKnown RBP12.55□□□□□ -0.4
RTCB-201ENST00000216038 AFDNP55196 1824 aaKnown RBP12.55□□□□□ -0.4
RTCB-201ENST00000216038 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.55□□□□□ -0.4
RTCB-201ENST00000216038 IGKV5-2P06315 115 aa12.55□□□□□ -0.4
RTCB-201ENST00000216038 UPF1Q92900 1129 aaKnown RBP eCLIP12.55□□□□□ -0.4
RTCB-201ENST00000216038 METTL22Q9BUU2 404 aaPredicted RBP12.55□□□□□ -0.4
RTCB-201ENST00000216038 SRCIN1Q9C0H9 1055 aa12.55□□□□□ -0.4
RTCB-201ENST00000216038 GPTP24298 496 aa12.54□□□□□ -0.4
RTCB-201ENST00000216038 CCT4P50991 539 aaKnown RBP12.54□□□□□ -0.4
RTCB-201ENST00000216038 NEXNQ0ZGT2 675 aa12.54□□□□□ -0.4
RTCB-201ENST00000216038 RTL5Q5HYW3 569 aaPredicted RBP12.54□□□□□ -0.4
RTCB-201ENST00000216038 TRAPPC3LQ5T215 181 aa12.54□□□□□ -0.4
RTCB-201ENST00000216038 C4AP0C0L4 1744 aa12.54□□□□□ -0.4
RTCB-201ENST00000216038 TUBGCP6Q96RT7 1819 aa12.54□□□□□ -0.4
RTCB-201ENST00000216038 CAMTA2O94983 1202 aa12.54□□□□□ -0.4
RTCB-201ENST00000216038 CCDC125Q86Z20 511 aa12.54□□□□□ -0.4
RTCB-201ENST00000216038 JARID2Q92833 1246 aaPredicted RBP12.54□□□□□ -0.4
RTCB-201ENST00000216038 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
RTCB-201ENST00000216038 MEIS3Q99687 375 aa12.54□□□□□ -0.4
RTCB-201ENST00000216038 C1orf115Q9H7X2 142 aa12.54□□□□□ -0.4
RTCB-201ENST00000216038 DDX19BQ9UMR2 479 aa12.54□□□□□ -0.4
RTCB-201ENST00000216038 ZBTB7BO15156 539 aaPredicted RBP12.53□□□□□ -0.4
RTCB-201ENST00000216038 RFC4P35249 363 aa12.53□□□□□ -0.4
RTCB-201ENST00000216038 USPL1Q5W0Q7 1092 aa12.53□□□□□ -0.4
RTCB-201ENST00000216038 GIGYF2Q6Y7W6 1299 aaKnown RBP12.53□□□□□ -0.4
RTCB-201ENST00000216038 LINS1Q8NG48 757 aa12.53□□□□□ -0.4
RTCB-201ENST00000216038 PXDNLA1KZ92 1463 aa12.52□□□□□ -0.4
RTCB-201ENST00000216038 NEURL1BA8MQ27 555 aa12.52□□□□□ -0.4
RTCB-201ENST00000216038 ZPR1O75312 459 aa12.52□□□□□ -0.4
RTCB-201ENST00000216038 N4BP2Q86UW6 1770 aaPredicted RBP12.52□□□□□ -0.4
RTCB-201ENST00000216038 A0A087WZG4 1122 aa12.52□□□□□ -0.41
RTCB-201ENST00000216038 FAM177BA6PVY3 158 aa12.52□□□□□ -0.41
RTCB-201ENST00000216038 TCIRG1Q13488 830 aa12.52□□□□□ -0.41
RTCB-201ENST00000216038 BICDL1Q6ZP65 573 aa12.52□□□□□ -0.41
RTCB-201ENST00000216038 USP44Q9H0E7 712 aa12.52□□□□□ -0.41
RTCB-201ENST00000216038 ATP10DQ9P241 1426 aa12.51□□□□□ -0.41
RTCB-201ENST00000216038 ERVV-1B6SEH8 477 aa12.51□□□□□ -0.41
RTCB-201ENST00000216038 NBPF7P0C2Y1 421 aaPredicted RBP12.51□□□□□ -0.41
RTCB-201ENST00000216038 ZBTB40Q9NUA8 1239 aa12.51□□□□□ -0.41
RTCB-201ENST00000216038 NARFQ9UHQ1 456 aa12.51□□□□□ -0.41
RTCB-201ENST00000216038 BCORQ6W2J9 1755 aa12.51□□□□□ -0.41
RTCB-201ENST00000216038 SSFA2P28290 1259 aa12.5□□□□□ -0.41
RTCB-201ENST00000216038 GCKRQ14397 625 aa12.5□□□□□ -0.41
RTCB-201ENST00000216038 BCL2L12Q9HB09 334 aa12.5□□□□□ -0.41
RTCB-201ENST00000216038 C9orf78Q9NZ63 289 aaPredicted RBP12.5□□□□□ -0.41
RTCB-201ENST00000216038 ANKRD36CQ5JPF3 1778 aa12.5□□□□□ -0.41
RTCB-201ENST00000216038 USP42Q9H9J4 1324 aaKnown RBP12.5□□□□□ -0.41
RTCB-201ENST00000216038 SLC15A2Q16348 729 aa12.5□□□□□ -0.41
RTCB-201ENST00000216038 COL23A1Q86Y22 540 aaPredicted RBP12.5□□□□□ -0.41
RTCB-201ENST00000216038 UBN2Q6ZU65 1347 aa12.49□□□□□ -0.41
RTCB-201ENST00000216038 ALDH1L1O75891 902 aa12.49□□□□□ -0.41
RTCB-201ENST00000216038 ADRA2BP18089 450 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms