RNA–Protein interactions for RNA: ENST00000002829.7

SEMA3F-201, Transcript of semaphorin 3F, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,802 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-201ENST00000002829 NMIQ13287 307 aaPredicted RBP16.14■□□□□ 0.17
SEMA3F-201ENST00000002829 SASS6Q6UVJ0 657 aa16.14■□□□□ 0.17
SEMA3F-201ENST00000002829 CGNQ9P2M7 1197 aaKnown RBP16.14■□□□□ 0.17
SEMA3F-201ENST00000002829 TULP4Q9NRJ4 1543 aa16.14■□□□□ 0.17
SEMA3F-201ENST00000002829 SPHKAPQ2M3C7 1700 aa16.13■□□□□ 0.17
SEMA3F-201ENST00000002829 PTH1RQ03431 593 aa16.13■□□□□ 0.17
SEMA3F-201ENST00000002829 CCDC144CPQ8IYA2 1237 aa16.13■□□□□ 0.17
SEMA3F-201ENST00000002829 ERCC4Q92889 916 aaPredicted RBP16.13■□□□□ 0.17
SEMA3F-201ENST00000002829 SPATA32Q96LK8 384 aa16.13■□□□□ 0.17
SEMA3F-201ENST00000002829 ZFYVE9O95405 1425 aa16.13■□□□□ 0.17
SEMA3F-201ENST00000002829 KIF1BO60333 1816 aa16.13■□□□□ 0.17
SEMA3F-201ENST00000002829 GTF2E1P29083 439 aaPredicted RBP16.13■□□□□ 0.17
SEMA3F-201ENST00000002829 HSPA2P54652 639 aa16.13■□□□□ 0.17
SEMA3F-201ENST00000002829 TIMM10P62072 90 aa16.13■□□□□ 0.17
SEMA3F-201ENST00000002829 SLFNL1Q499Z3 407 aa16.13■□□□□ 0.17
SEMA3F-201ENST00000002829 PIBF1Q8WXW3 757 aa16.13■□□□□ 0.17
SEMA3F-201ENST00000002829 SKIDA1Q1XH10 827 aa16.12■□□□□ 0.17
SEMA3F-201ENST00000002829 CHMP4AQ9BY43 222 aa16.12■□□□□ 0.17
SEMA3F-201ENST00000002829 SYT1P21579 422 aa16.12■□□□□ 0.17
SEMA3F-201ENST00000002829 ME1P48163 572 aa16.12■□□□□ 0.17
SEMA3F-201ENST00000002829 TNMDQ9H2S6 317 aa16.12■□□□□ 0.17
SEMA3F-201ENST00000002829 ABCC3O15438 1527 aa16.12■□□□□ 0.17
SEMA3F-201ENST00000002829 PIK3R4Q99570 1358 aa16.12■□□□□ 0.17
SEMA3F-201ENST00000002829 TSPOAP1O95153 1857 aa16.12■□□□□ 0.17
SEMA3F-201ENST00000002829 CCAR2Q8N163 923 aaKnown RBP16.12■□□□□ 0.17
SEMA3F-201ENST00000002829 NFXL1Q6ZNB6 911 aa16.11■□□□□ 0.17
SEMA3F-201ENST00000002829 BRF1Q92994 677 aa16.11■□□□□ 0.17
SEMA3F-201ENST00000002829 ADCK5Q3MIX3 580 aa16.11■□□□□ 0.17
SEMA3F-201ENST00000002829 LMBR1LQ6UX01 489 aa16.11■□□□□ 0.17
SEMA3F-201ENST00000002829 ZFP91Q96JP5 570 aaPredicted RBP16.11■□□□□ 0.17
SEMA3F-201ENST00000002829 SEC62Q99442 399 aaKnown RBP16.11■□□□□ 0.17
SEMA3F-201ENST00000002829 IL25Q9H293 177 aa16.11■□□□□ 0.17
SEMA3F-201ENST00000002829 TRMT1Q9NXH9 659 aaKnown RBP16.11■□□□□ 0.17
SEMA3F-201ENST00000002829 TLR7Q9NYK1 1049 aaKnown RBP16.11■□□□□ 0.17
SEMA3F-201ENST00000002829 KIF3AQ9Y496 699 aa16.11■□□□□ 0.17
SEMA3F-201ENST00000002829 TET3O43151 1660 aa16.11■□□□□ 0.17
SEMA3F-201ENST00000002829 PDCL2Q8N4E4 241 aa16.11■□□□□ 0.17
SEMA3F-201ENST00000002829 A0A087WWV3 80 aa16.1■□□□□ 0.17
SEMA3F-201ENST00000002829 CHGBP05060 677 aa16.1■□□□□ 0.17
SEMA3F-201ENST00000002829 KRT85P78386 507 aa16.1■□□□□ 0.17
SEMA3F-201ENST00000002829 LRSAM1Q6UWE0 723 aa16.1■□□□□ 0.17
SEMA3F-201ENST00000002829 ZNF594Q96JF6 807 aaPredicted RBP16.1■□□□□ 0.17
SEMA3F-201ENST00000002829 MAP7D2Q96T17 732 aa16.1■□□□□ 0.17
SEMA3F-201ENST00000002829 CEP152O94986 1710 aa16.1■□□□□ 0.17
SEMA3F-201ENST00000002829 POLR1AO95602 1720 aaPredicted RBP16.1■□□□□ 0.17
SEMA3F-201ENST00000002829 GRM8O00222 908 aa16.1■□□□□ 0.17
SEMA3F-201ENST00000002829 BIN1O00499 593 aa16.1■□□□□ 0.17
SEMA3F-201ENST00000002829 PSMA5P28066 241 aa16.1■□□□□ 0.17
SEMA3F-201ENST00000002829 SUCLG2Q96I99 432 aa16.1■□□□□ 0.17
SEMA3F-201ENST00000002829 SNX14Q9Y5W7 946 aa16.1■□□□□ 0.17
SEMA3F-201ENST00000002829 IDH1O75874 414 aaKnown RBP16.09■□□□□ 0.17
SEMA3F-201ENST00000002829 HSP90AA4PQ58FG1 418 aa16.09■□□□□ 0.17
SEMA3F-201ENST00000002829 VGLL3A8MV65 326 aa16.09■□□□□ 0.17
SEMA3F-201ENST00000002829 TPD52L1Q16890 204 aaPredicted RBP16.09■□□□□ 0.17
SEMA3F-201ENST00000002829 ANKRD13DQ6ZTN6 518 aa16.09■□□□□ 0.17
SEMA3F-201ENST00000002829 FAM177A1Q8N128 213 aaPredicted RBP16.09■□□□□ 0.17
SEMA3F-201ENST00000002829 POLR3DP05423 398 aaPredicted RBP16.09■□□□□ 0.17
SEMA3F-201ENST00000002829 U2AF2P26368 475 aaKnown RBP eCLIP16.09■□□□□ 0.17
SEMA3F-201ENST00000002829 NOLC1Q14978 699 aaKnown RBP eCLIP16.09■□□□□ 0.17
SEMA3F-201ENST00000002829 SLC4A8Q2Y0W8 1093 aa16.08■□□□□ 0.17
SEMA3F-201ENST00000002829 RALYLQ86SE5 291 aaKnown RBP16.08■□□□□ 0.17
SEMA3F-201ENST00000002829 IQSEC3Q9UPP2 1182 aaPredicted RBP16.08■□□□□ 0.17
SEMA3F-201ENST00000002829 MAP3K5Q99683 1374 aa16.08■□□□□ 0.17
SEMA3F-201ENST00000002829 FAM135BQ49AJ0 1406 aa16.08■□□□□ 0.16
SEMA3F-201ENST00000002829 USP16Q9Y5T5 823 aa16.08■□□□□ 0.16
SEMA3F-201ENST00000002829 TFCP2Q12800 502 aa16.08■□□□□ 0.16
SEMA3F-201ENST00000002829 ERC1Q8IUD2 1116 aa16.08■□□□□ 0.16
SEMA3F-201ENST00000002829 PPRC1Q5VV67 1664 aaKnown RBP16.07■□□□□ 0.16
SEMA3F-201ENST00000002829 ZSCAN22P10073 491 aaPredicted RBP16.07■□□□□ 0.16
SEMA3F-201ENST00000002829 EIF4A1P60842 406 aaKnown RBP16.07■□□□□ 0.16
SEMA3F-201ENST00000002829 LARP1Q6PKG0 1096 aaKnown RBP16.07■□□□□ 0.16
SEMA3F-201ENST00000002829 CCDC73Q6ZRK6 1079 aa16.07■□□□□ 0.16
SEMA3F-201ENST00000002829 KCNH5Q8NCM2 988 aa16.07■□□□□ 0.16
SEMA3F-201ENST00000002829 NUP62CLQ9H1M0 184 aa16.07■□□□□ 0.16
SEMA3F-201ENST00000002829 RXRAP19793 462 aa16.07■□□□□ 0.16
SEMA3F-201ENST00000002829 KSR2Q6VAB6 950 aa16.07■□□□□ 0.16
SEMA3F-201ENST00000002829 GLI2P10070 1586 aa16.07■□□□□ 0.16
SEMA3F-201ENST00000002829 LARGE1O95461 756 aa16.07■□□□□ 0.16
SEMA3F-201ENST00000002829 OTUD7BQ6GQQ9 843 aa16.07■□□□□ 0.16
SEMA3F-201ENST00000002829 CNNM1Q9NRU3 951 aa16.07■□□□□ 0.16
SEMA3F-201ENST00000002829 NOL7Q9UMY1 257 aaKnown RBP16.07■□□□□ 0.16
SEMA3F-201ENST00000002829 TMEM2Q9UHN6 1383 aa16.06■□□□□ 0.16
SEMA3F-201ENST00000002829 PLEKHG3A1L390 1219 aa16.06■□□□□ 0.16
SEMA3F-201ENST00000002829 HELBQ8NG08 1087 aaPredicted RBP16.06■□□□□ 0.16
SEMA3F-201ENST00000002829 EAF2Q96CJ1 260 aaPredicted RBP16.06■□□□□ 0.16
SEMA3F-201ENST00000002829 NCOA5Q9HCD5 579 aaKnown RBP16.06■□□□□ 0.16
SEMA3F-201ENST00000002829 MLH3Q9UHC1 1453 aa16.06■□□□□ 0.16
SEMA3F-201ENST00000002829 GOLGA6L6A8MZA4 724 aa16.06■□□□□ 0.16
SEMA3F-201ENST00000002829 ZNF496Q96IT1 587 aaPredicted RBP16.06■□□□□ 0.16
SEMA3F-201ENST00000002829 DBNDD2Q9BQY9 259 aa16.06■□□□□ 0.16
SEMA3F-201ENST00000002829 TMX1Q9H3N1 280 aa16.06■□□□□ 0.16
SEMA3F-201ENST00000002829 PES1O00541 588 aaKnown RBP16.05■□□□□ 0.16
SEMA3F-201ENST00000002829 RNMTO43148 476 aaKnown RBP16.05■□□□□ 0.16
SEMA3F-201ENST00000002829 JAK2O60674 1132 aa16.05■□□□□ 0.16
SEMA3F-201ENST00000002829 DACT1Q9NYF0 836 aa16.05■□□□□ 0.16
SEMA3F-201ENST00000002829 A1BGP04217 495 aa16.05■□□□□ 0.16
SEMA3F-201ENST00000002829 CCDC57Q2TAC2 916 aa16.05■□□□□ 0.16
SEMA3F-201ENST00000002829 TTC39AQ5SRH9 613 aa16.05■□□□□ 0.16
SEMA3F-201ENST00000002829 LRRC7Q96NW7 1537 aa16.05■□□□□ 0.16
SEMA3F-201ENST00000002829 SGSM2O43147 1006 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms